Supplemental Table 1. New insertion sites of mRiplet2 and Riplet1 in C5924 cell line

Element / Adapter primer / Size of the fragment from TD / Hit in database / Position of insertion site1
mRiplet2 / Mse I + A / 89 / Contig482 / 21140
101 / Contig7079 / 5186
119 / Contig10017 / 7552
129 / Contig16063 / 4588
137 / Contig21518 / 1963
148 / Contig24556 / 2216
165 / Contig40966 / 517
173 / Contig4310 / 4497
195 / Contig391 / 157
237 / Contig34913 / 276
247 / Contig65368 / 166
320 / Contig23309 / 338
Mse I + C / 126 / Contig909 / 21055
152 / Contig17922 / 3757
172 / Contig17222 / 4466
187 / Contig4708 / 2198
238 / Contig18737 / 4241
244 / Contig42209 / 1029
256 / Contig25343 / 2750
Mse I + G / 93 / Contig17946 / 4149
124 / Contig17419 / 2467
136 / Contig23646 / 1322
147 / Contig1408 / 5777
153 / Contig2742 / 15355
189 / Contig17506 / 1995
217 / Contig15096 / 1964
239 / Contig63623 / 327
262 / Contig5138 / 10139
302 / Contig7692 / 1306
Contig22012 / 962
Mse I + T / 143 / AL7318842 / 101352
162 / Contig13315 / 1527
164 / Contig2742 / 15355
196 / Contig63668 / 72
230 / Contig10585 / 7471
267 / Contig10749 / 6329
Riplet1 / Mse I + 0 / 116 / Contig7304 / 8347
141 / Contig2744 / 3314
169 / Contig1031 / 18894
181 / Contig18 / 48390
203 / Contig35873 / 1
224 / Contig3321 / 8382
Contig16311 / 5969
Contig24541 / 2774
257 / Contig494 / 22438
318 / Contig18755 / 2443
340 / Contig51 / 16732
377 / Contig6747 / 193

1The position of the first nucleotide of the trinucleotide TSD is listed

2GenBank accession number for Nipponbare. All others are from 93-11