Table S5: The Top 51 pathways associated with systemic progression by Ingenuity Pathway Analysis.

Pathwayp-Value Number of Number of

genes from genes from data pathway

PI3K/AKT Signaling 1.26E-1626144

Aryl Hydrocarbon Receptor Signaling1.26E-1424147

p53 Signaling1.00E-131987

Apoptosis Signaling6.31E-1320111

TGF-β Signaling1.26E-1219106

PTEN Signaling3.98E-1219109

IGF-1 Signaling1.58E-101690

IL-6 Signaling2.69E-101693

B Cell Receptor Signaling1.32E-0919148

Cell Cycle: G1/S Checkpoint Regulation2.88E-091257

Death Receptor Signaling1.02E-081262

Cell Cycle: G2/M DNA Damage

Checkpoint Regulation 1.05E-081042

Integrin Signaling1.78E-0821211

Ephrin Receptor Signaling1.95E-0820207

Axonal Guidance Signaling2.57E-0829407

ERK/MAPK Signaling3.89E-0820202

SAPK/JNK Signaling3.89E-0816130

PPAR Signaling7.41E-081393

T Cell Receptor Signaling1.07E-0714104

NF-κB Signaling1.15E-0716139

PPARα/RXRα Activation1.55E-0716145

Wnt/β-catenin Signaling1.70E-0717162

IL-2 Signaling2.63E-071053

PDGF Signaling1.00E-061175

FGF Signaling3.63E-061184

Actin Cytoskeleton Signaling3.80E-0619254

Neuregulin Signaling5.13E-061189

Huntington's Disease Signaling1.20E-0517229

IL-10 Signaling2.57E-05970

Toll-like Receptor Signaling2.75E-05853

VEGF Signaling2.95E-051090

Neurotrophin/TRK Signaling3.63E-05972

GM-CSF Signaling6.92E-05862

EGF Signaling9.55E-05747

Insulin Receptor Signaling1.55E-0411125

Chemokine Signaling3.39E-04875

p38 MAPK Signaling3.55E-04995

JAK/Stat Signaling3.72E-04759

Fc EpsilonRI Signaling4.79E-049100

G-Protein Coupled Receptor Signaling7.41E-0413200

NRF2-mediated Oxidative Stress Response1.07E-0310142

Hypoxia Signaling in the

Cardiovascular System4.57E-03668

Nicotinate and Nicotinamide Metabolism4.79E-038129

Sonic Hedgehog Signaling4.79E-03431

Leukocyte Extravasation Signaling1.12E-0210186

Estrogen Receptor Signaling1.29E-027113

Natural Killer Cell Signaling1.41E-027110

IL-4 Signaling1.51E-02564

Inositol Phosphate Metabolism1.58E-029178

Xenobiotic Metabolism Signaling1.62E-0211228

Amyotrophic Lateral Sclerosis Signaling3.23E-026103