(Including the Outgroup)With the Twenty-Three Parsimony Informative Siteshighlighted
Fig. S1Sequence alignment of the five cpDNA regions (psbE-petL, trnS-trnG, atpH-atpI, accD-psaI and trnT-trnF) of the twenty-five accessions
(including the outgroup)with the twenty-three parsimony informative siteshighlighted
(* indicates the parsimony informative site. Samples No. 01 to No.10 belong to lineage I, No.11 belongs to lineage II, No.12 and No. 13
belong to lineage III, No.14 to No. 16 belong to lineage IV, No.17 to No. 24 belong to lineage V, and No.25 is the outgroup)
| psbE-petL→
*
Variable site [ 3, 6 16, 74 ]
01Er_Qiao TCTTCTTTTC TTTTTTGTTG CTTGTTGACG TGCCGATCAA TAGAAAATTC CCCCAATTCC TATCGTCTAG AACCCGCTCT [ 80]
02Jing_Yu ...... [ 80]
03Jinxing_Xuelang ...... [ 80]
04Luoyang_Hong ...... [ 80]
05Die_Yun ...... [ 80]
06Shanhu_Tai ...... [ 80]
07Jingzhen_Xiu_Hongpao ...... [ 80]
08Guanshi_Hongyu ...... [ 80]
09Huaban_Bai ...... [ 80]
10Fenmo_Shuanghui ...... [ 80]
11Hetang_Yuese ...... [ 80]
12P_ostii ..G...... [ 80]
13Hongban_Bai ..G...... [ 80]
14Rou_Furong ...... [ 80]
15Fengdan_Fen ...... [ 80]
16Fenmian_Taosai ...... [ 80]
17Hei_Fengdie ...... [ 80]
18Heiban_Bai ...... [ 80]
19Xuehai_Danxin ...... [ 80]
20Yao_Huang ...... [ 80]
21Dou_Lü ...... [ 80]
22Luorong_Hong ...... [ 80]
23Da_Huhong ...... [ 80]
24Shou’an_Hong ...... [ 80]
25P_obovata .....C...... G...... T...... [ 80]
01Er_Qiao ATTATTGGCG TTAGACTAGA AACTGAAGAT CGGGTAAACC AGGAGTCCAG CGAGAGTTGG TTTCTAATAA TTCATGAAGG [ 160]
02Jing_Yu ...... [ 160]
03Jinxing_Xuelang ...... [ 160]
04Luoyang_Hong ...... [ 160]
05Die_Yun ...... [ 160]
06Shanhu_Tai ...... [ 160]
07Jingzhen_Xiu_Hongpao ...... [ 160]
08Guanshi_Hongyu ...... [ 160]
09Huaban_Bai ...... [ 160]
10Fenmo_Shuanghui ...... [ 160]
11Hetang_Yuese ...... [ 160]
12P_ostii ...... [ 160]
13Hongban_Bai ...... [ 160]
14Rou_Furong ...... [ 160]
15Fengdan_Fen ...... [ 160]
16Fenmian_Taosai ...... [ 160]
17Hei_Fengdie ...... [ 160]
18Heiban_Bai ...... [ 160]
19Xuehai_Danxin ...... [ 160]
20Yao_Huang ...... [ 160]
21Dou_Lü ...... [ 160]
22Luorong_Hong ...... [ 160]
23Da_Huhong ...... [ 160]
24Shou’an_Hong ...... [ 160]
25P_obovata ...... [ 160]
Variable site [ 196, 239 ]
01Er_Qiao AGATTATCAG ATTTCCGCAA GGAAATTCAA TTATAGGCGA AATCCATAAA TCTCCTTTTA TTTTCGTAAG GGGTTTTTAT [ 240]
02Jing_Yu ...... [ 240]
03Jinxing_Xuelang ...... [ 240]
04Luoyang_Hong ...... [ 240]
05Die_Yun ...... [ 240]
06Shanhu_Tai ...... [ 240]
07Jingzhen_Xiu_Hongpao ...... [ 240]
08Guanshi_Hongyu ...... [ 240]
09Huaban_Bai ...... [ 240]
10Fenmo_Shuanghui ...... [ 240]
11Hetang_Yuese ...... [ 240]
12P_ostii ...... [ 240]
13Hongban_Bai ...... [ 240]
14Rou_Furong ...... [ 240]
15Fengdan_Fen ...... [ 240]
16Fenmian_Taosai ...... [ 240]
17Hei_Fengdie ...... [ 240]
18Heiban_Bai ...... [ 240]
19Xuehai_Danxin ...... [ 240]
20Yao_Huang ...... [ 240]
21Dou_Lü ...... [ 240]
22Luorong_Hong ...... [ 240]
23Da_Huhong ...... [ 240]
24Shou’an_Hong ...... [ 240]
25P_obovata ...... C...... C. [ 240]
*
Variable site [ 249, 279, 301 ]
01Er_Qiao TGATTAGCCC TGCTAAGAAG AGAAGAATAA ATAATGTTCG ACGAAAAAAA TGATAATAAT CAAAATTCGT GATGCTTGTT [ 320]
02Jing_Yu ...... [ 320]
03Jinxing_Xuelang ...... [ 320]
04Luoyang_Hong ...... [ 320]
05Die_Yun ...... [ 320]
06Shanhu_Tai ...... [ 320]
07Jingzhen_Xiu_Hongpao ...... [ 320]
08Guanshi_Hongyu ...... [ 320]
09Huaban_Bai ...... [ 320]
10Fenmo_Shuanghui ...... [ 320]
11Hetang_Yuese ...... T...... [ 320]
12P_ostii ...... [ 320]
13Hongban_Bai ...... [ 320]
14Rou_Furong ...... A...... [ 320]
15Fengdan_Fen ...... A...... [ 320]
16Fenmian_Taosai ...... A...... [ 320]
17Hei_Fengdie ...... A...... [ 320]
18Heiban_Bai ...... A...... [ 320]
19Xuehai_Danxin ...... A...... [ 320]
20Yao_Huang ...... A...... [ 320]
21Dou_Lü ...... A...... [ 320]
22Luorong_Hong ...... A...... [ 320]
23Da_Huhong ...... A...... [ 320]
24Shou’an_Hong ...... A...... [ 320]
25P_obovata ...... T...... [ 320]
*
Variable site [ 338, 348, 373 ]
01Er_Qiao TGTATTAGAA TTAGATTATA TCTAAAGAAA AGGCTCGTTC TTGACCTAGG CAAAGCTTTA TAATATAGAA AGACTGTAGA [ 400]
02Jing_Yu ...... [ 400]
03Jinxing_Xuelang ...... [ 400]
04Luoyang_Hong ...... [ 400]
05Die_Yun ...... [ 400]
06Shanhu_Tai ...... [ 400]
07Jingzhen_Xiu_Hongpao ...... [ 400]
08Guanshi_Hongyu ...... [ 400]
09Huaban_Bai ...... [ 400]
10Fenmo_Shuanghui ...... [ 400]
11Hetang_Yuese ...... G...... [ 400]
12P_ostii ...... G...... [ 400]
13Hongban_Bai ...... G...... [ 400]
14Rou_Furong ...... G...... [ 400]
15Fengdan_Fen ...... G...... [ 400]
16Fenmian_Taosai ...... G...... [ 400]
17Hei_Fengdie ...... G...... [ 400]
18Heiban_Bai ...... G...... [ 400]
19Xuehai_Danxin ...... G...... [ 400]
20Yao_Huang ...... G...... [ 400]
21Dou_Lü ...... G...... [ 400]
22Luorong_Hong ...... G...... [ 400]
23Da_Huhong ...... G...... [ 400]
24Shou’an_Hong ...... G...... [ 400]
25P_obovata ...... C...... G...... G...... [ 400]
*
Variable site [ 416, 460, 468 ]
01Er_Qiao TGTAGAACCT AGAAAGGACA AGATAATAGA AATCGCCAGT TTTAGAATCT AGGTGGACCA AAATAACTAT TTGAGTTTTT [ 480]
02Jing_Yu ...... [ 480]
03Jinxing_Xuelang ...... [ 480]
04Luoyang_Hong ...... [ 480]
05Die_Yun ...... [ 480]
06Shanhu_Tai ...... [ 480]
07Jingzhen_Xiu_Hongpao ...... [ 480]
08Guanshi_Hongyu ...... [ 480]
09Huaban_Bai ...... [ 480]
10Fenmo_Shuanghui ...... [ 480]
11Hetang_Yuese ...... [ 480]
12P_ostii ...... [ 480]
13Hongban_Bai ...... [ 480]
14Rou_Furong ...... A...... [ 480]
15Fengdan_Fen ...... A...... [ 480]
16Fenmian_Taosai ...... A...... [ 480]
17Hei_Fengdie ...... [ 480]
18Heiban_Bai ...... [ 480]
19Xuehai_Danxin ...... [ 480]
20Yao_Huang ...... [ 480]
21Dou_Lü ...... [ 480]
22Luorong_Hong ...... [ 480]
23Da_Huhong ...... [ 480]
24Shou’an_Hong ...... [ 480]
25P_obovata ...... C ...... G...... [ 480]
Variable site [ 489 ]
01Er_Qiao CGAGAGATCT GCTCGTGCGA TACCCTTTAT TTTAGGCAAG ATATTATATT ATGTGACTAA ACCTATTACG GAATCTAATG [ 560]
02Jing_Yu ...... [ 560]
03Jinxing_Xuelang ...... [ 560]
04Luoyang_Hong ...... [ 560]
05Die_Yun ...... [ 560]
06Shanhu_Tai ...... [ 560]
07Jingzhen_Xiu_Hongpao ...... [ 560]
08Guanshi_Hongyu ...... [ 560]
09Huaban_Bai ...... [ 560]
10Fenmo_Shuanghui ...... [ 560]
11Hetang_Yuese ...... [ 560]
12P_ostii ...... [ 560]
13Hongban_Bai ...... [ 560]
14Rou_Furong ...... [ 560]
15Fengdan_Fen ...... [ 560]
16Fenmian_Taosai ...... [ 560]
17Hei_Fengdie ...... [ 560]
18Heiban_Bai ...... [ 560]
19Xuehai_Danxin ...... [ 560]
20Yao_Huang ...... [ 560]
21Dou_Lü ...... [ 560]
22Luorong_Hong ...... [ 560]
23Da_Huhong ...... [ 560]
24Shou’an_Hong ...... [ 560]
25P_obovata ...... A...... [ 560]
*
Variable site [ 571,574 ]
01Er_Qiao AGTTAAAATT CAAATTATGA TGTTTATTCC AAAATAATTC ATTCAAAGAG AGTTTCTTTT TTGGAATGAA GTTACATGAC [ 640]
02Jing_Yu ...... [ 640]
03Jinxing_Xuelang ...... [ 640]
04Luoyang_Hong ...... [ 640]
05Die_Yun ...... [ 640]
06Shanhu_Tai ...... [ 640]
07Jingzhen_Xiu_Hongpao ...... [ 640]
08Guanshi_Hongyu ...... [ 640]
09Huaban_Bai ...... [ 640]
10Fenmo_Shuanghui ...... [ 640]
11Hetang_Yuese ...... A...... [ 640]
12P_ostii ...... A...... [ 640]
13Hongban_Bai ...... A...... [ 640]
14Rou_Furong ...... A...... [ 640]
15Fengdan_Fen ...... A...... [ 640]
16Fenmian_Taosai ...... A...... [ 640]
17Hei_Fengdie ...... A...... [ 640]
18Heiban_Bai ...... A...... [ 640]
19Xuehai_Danxin ...... A...... [ 640]
20Yao_Huang ...... A...... [ 640]
21Dou_Lü ...... A...... [ 640]
22Luorong_Hong ...... A...... [ 640]
23Da_Huhong ...... A...... [ 640]
24Shou’an_Hong ...... A...... [ 640]
25P_obovata ...... G...... [ 640]
*
Variable site [ 669, 712 ]
01Er_Qiao ACGGTTATTA ATTATAATTT TATTATTTCT ATTTGTTTAC TCACGAGTTG CCCAATTAAT CTGTTGATTC GGAATCGCGG [ 720]
02Jing_Yu ...... [ 720]
03Jinxing_Xuelang ...... [ 720]
04Luoyang_Hong ...... [ 720]
05Die_Yun ...... [ 720]
06Shanhu_Tai ...... [ 720]
07Jingzhen_Xiu_Hongpao ...... [ 720]
08Guanshi_Hongyu ...... [ 720]
09Huaban_Bai ...... [ 720]
10Fenmo_Shuanghui ...... [ 720]
11Hetang_Yuese ...... [ 720]
12P_ostii ...... [ 720]
13Hongban_Bai ...... [ 720]
14Rou_Furong ...... T...... [ 720]
15Fengdan_Fen ...... T...... [ 720]
16Fenmian_Taosai ...... T...... [ 720]
17Hei_Fengdie ...... T...... [ 720]
18Heiban_Bai ...... T...... [ 720]
19Xuehai_Danxin ...... T...... [ 720]
20Yao_Huang ...... T...... [ 720]
21Dou_Lü ...... T...... [ 720]
22Luorong_Hong ...... T...... [ 720]
23Da_Huhong ...... T...... [ 720]
24Shou’an_Hong ...... T...... [ 720]
25P_obovata ...... T...... [ 720]
←psbE-petL | trnS-trnG→
*
Variable site [ 739, 767, 789 ]
01Er_Qiao GATGGGTGAA TTGAAAAAGC TATATTACAT TACACATAAA GTAAGGATTA AAAAAAGGTA TTTCTTTAGA TCTTCTCTCT [ 800]
02Jing_Yu ...... [ 800]
03Jinxing_Xuelang ...... [ 800]
04Luoyang_Hong ...... [ 800]
05Die_Yun ...... [ 800]
06Shanhu_Tai ...... [ 800]
07Jingzhen_Xiu_Hongpao ...... [ 800]
08Guanshi_Hongyu ...... [ 800]
09Huaban_Bai ...... [ 800]
10Fenmo_Shuanghui ...... [ 800]
11Hetang_Yuese ...... G...... [ 800]
12P_ostii ...... A...... [ 800]
13Hongban_Bai ...... A...... [ 800]
14Rou_Furong ...... [ 800]
15Fengdan_Fen ...... [ 800]
16Fenmian_Taosai ...... [ 800]
17Hei_Fengdie ...... [ 800]
18Heiban_Bai ...... [ 800]
19Xuehai_Danxin ...... [ 800]
20Yao_Huang ...... [ 800]
21Dou_Lü ...... [ 800]
22Luorong_Hong ...... [ 800]
23Da_Huhong ...... [ 800]
24Shou’an_Hong ...... [ 800]
25P_obovata ...... A...... [ 800]
Variable site [ 874—880 ]
01Er_Qiao TTATTATATA GATATATAAA ACTTTTATCA GCAATATCAA ATAAGGACTC GAAAGAAAAA GAAATATTTC CAATATAAAA [ 880]
02Jing_Yu ...... [ 880]
03Jinxing_Xuelang ...... [ 880]
04Luoyang_Hong ...... [ 880]
05Die_Yun ...... [ 880]
06Shanhu_Tai ...... [ 880]
07Jingzhen_Xiu_Hongpao ...... [ 880]
08Guanshi_Hongyu ...... [ 880]
09Huaban_Bai ...... [ 880]
10Fenmo_Shuanghui ...... [ 880]
11Hetang_Yuese ...... [ 880]
12P_ostii ...... [ 880]
13Hongban_Bai ...... [ 880]
14Rou_Furong ...... ------[ 880]
15Fengdan_Fen ...... ------[ 880]
16Fenmian_Taosai ...... ------[ 880]
17Hei_Fengdie ...... ------[ 880]
18Heiban_Bai ...... ------[ 880]
19Xuehai_Danxin ...... ------[ 880]
20Yao_Huang ...... ------[ 880]
21Dou_Lü ...... ------[ 880]
22Luorong_Hong ...... ------[ 880]
23Da_Huhong ...... ------[ 880]
24Shou’an_Hong ...... ------[ 880]
25P_obovata ...... [ 880]
Variable site [ 881, 923 ]
01Er_Qiao AGAAAGAATA CTTCTTTGAT TTCGTCCGAA AGGGCCGTTT TTATTCTCAC GGCCTGGCCG GGTCAGTACC TAGCCGGGCC [ 960]
02Jing_Yu ...... [ 960]
03Jinxing_Xuelang ...... [ 960]
04Luoyang_Hong ...... [ 960]
05Die_Yun ...... [ 960]
06Shanhu_Tai ...... [ 960]
07Jingzhen_Xiu_Hongpao ...... [ 960]
08Guanshi_Hongyu ...... [ 960]
09Huaban_Bai ...... [ 960]
10Fenmo_Shuanghui ...... [ 960]
11Hetang_Yuese ...... [ 960]
12P_ostii ...... [ 960]
13Hongban_Bai ...... [ 960]
14Rou_Furong -...... [ 960]
15Fengdan_Fen -...... [ 960]
16Fenmian_Taosai -...... [ 960]
17Hei_Fengdie -...... [ 960]
18Heiban_Bai -...... [ 960]
19Xuehai_Danxin -...... [ 960]
20Yao_Huang -...... [ 960]
21Dou_Lü -...... [ 960]
22Luorong_Hong -...... [ 960]
23Da_Huhong -...... [ 960]
24Shou’an_Hong -...... [ 960]
25P_obovata ...... C...... [ 960]
01Er_Qiao TTTTTGTTTT GTTTCAATGA ATCATAATCA TAGATAAAAT GATTTGAAAC AAAAATTCTT GTTATTGAAG CAACAACACC [1040]
02Jing_Yu ...... [1040]
03Jinxing_Xuelang ...... [1040]
04Luoyang_Hong ...... [1040]
05Die_Yun ...... [1040]
06Shanhu_Tai ...... [1040]
07Jingzhen_Xiu_Hongpao ...... [1040]
08Guanshi_Hongyu ...... [1040]
09Huaban_Bai ...... [1040]
10Fenmo_Shuanghui ...... [1040]
11Hetang_Yuese ...... [1040]
12P_ostii ...... [1040]
13Hongban_Bai ...... [1040]
14Rou_Furong ...... [1040]
15Fengdan_Fen ...... [1040]
16Fenmian_Taosai ...... [1040]
17Hei_Fengdie ...... [1040]
18Heiban_Bai ...... [1040]
19Xuehai_Danxin ...... [1040]
20Yao_Huang ...... [1040]
21Dou_Lü ...... [1040]
22Luorong_Hong ...... [1040]
23Da_Huhong ...... [1040]
24Shou’an_Hong ...... [1040]
25P_obovata ...... [1040]
Variable site [ 1082, 1094, 1104----1111, 1117 ]
01Er_Qiao CAAAAGTAAG GGCTGTTTTA TTTCCATTCT GGAATCAAAG TCTTATTTCT TATTTTATTA TTT------ACTTTAATT [1120]
02Jing_Yu ...... ------...... [1120]
03Jinxing_Xuelang ...... ------...... [1120]
04Luoyang_Hong ...... ------...... [1120]
05Die_Yun ...... ------...... [1120]
06Shanhu_Tai ...... ------...... [1120]
07Jingzhen_Xiu_Hongpao ...... ------...... [1120]
08Guanshi_Hongyu ...... ------...... [1120]
09Huaban_Bai ...... ------...... [1120]
10Fenmo_Shuanghui ...... ------...... [1120]
11Hetang_Yuese ...... ------...... [1120]
12P_ostii ...... ------...... [1120]
13Hongban_Bai ...... ------...... [1120]
14Rou_Furong ...... ------...... [1120]
15Fengdan_Fen ...... ------...... [1120]
16Fenmian_Taosai ...... ------...... [1120]
17Hei_Fengdie ...... ------...... [1120]
18Heiban_Bai ...... ------...... [1120]
19Xuehai_Danxin ...... ------...... [1120]
20Yao_Huang ...... ------...... [1120]
21Dou_Lü ...... ------...... [1120]
22Luorong_Hong ...... ------...... [1120]
23Da_Huhong ...... ------...... [1120]
24Shou’an_Hong ...... ------...... [1120]
25P_obovata ...... A...... C...... TATTCTT T.....C... [1120]
*
Variable site [ 1122,1127-1131, 1139, 1149---1154, 1177 ]
01Er_Qiao TGAATA---- -CTAGATTTG AATAAAAA------TTATGG CTATGGATTC TTTTTT-ATG TTATAACTTA AGTGATTTTG [1200]
02Jing_Yu ...... ---- -...... ------...... -...... [1200]
03Jinxing_Xuelang ...... ---- -...... ------...... -...... [1200]
04Luoyang_Hong ...... ---- -...... ------...... -...... [1200]
05Die_Yun ...... ---- -...... ------...... -...... [1200]
06Shanhu_Tai ...... ---- -...... ------...... -...... [1200]
07Jingzhen_Xiu_Hongpao ...... ---- -...... ------...... -...... [1200]
08Guanshi_Hongyu ...... ---- -...... ------...... -...... [1200]
09Huaban_Bai ...... ---- -...... ------...... -...... [1200]
10Fenmo_Shuanghui ...... ---- -...... ------...... -...... [1200]
11Hetang_Yuese .T....---- -...... ------...... -...... [1200]
12P_ostii .T....---- -...... ------...... -...... [1200]
13Hongban_Bai .T....---- -...... ------...... -...... [1200]
14Rou_Furong .T....---- -...... ------...... -...... [1200]
15Fengdan_Fen .T....---- -...... ------...... -...... [1200]
16Fenmian_Taosai .T....---- -...... ------...... -...... [1200]
17Hei_Fengdie .T....---- -...... ------...... -...... [1200]
18Heiban_Bai .T....---- -...... ------...... -...... [1200]
19Xuehai_Danxin .T....---- -...... ------...... -...... [1200]
20Yao_Huang .T....---- -...... ------...... -...... [1200]
21Dou_Lü .T....---- -...... ------...... -...... [1200]
22Luorong_Hong .T....---- -...... ------...... -...... [1200]
23Da_Huhong .T....---- -...... ------...... -...... [1200]
24Shou’an_Hong .T....---- -...... ------...... -...... [1200]
25P_obovata .T....TAAT A...... C...... CC GAAC...... T...... [1200]
01Er_Qiao TTGAGCCGTA TTTATTTGCC AAAACTCCTC CATCAACAGA CAAGATCGAA CTTGTTATTT AAATGAGCCC CTCTTAATCT [1280]
02Jing_Yu ...... [1280]
03Jinxing_Xuelang ...... [1280]
04Luoyang_Hong ...... [1280]
05Die_Yun ...... [1280]
06Shanhu_Tai ...... [1280]
07Jingzhen_Xiu_Hongpao ...... [1280]
08Guanshi_Hongyu ...... [1280]
09Huaban_Bai ...... [1280]
10Fenmo_Shuanghui ...... [1280]
11Hetang_Yuese ...... [1280]
12P_ostii ...... [1280]
13Hongban_Bai ...... [1280]
14Rou_Furong ...... [1280]
15Fengdan_Fen ...... [1280]
16Fenmian_Taosai ...... [1280]
17Hei_Fengdie ...... [1280]
18Heiban_Bai ...... [1280]
19Xuehai_Danxin ...... [1280]
20Yao_Huang ...... [1280]
21Dou_Lü ...... [1280]
22Luorong_Hong ...... [1280]
23Da_Huhong ...... [1280]
24Shou’an_Hong ...... [1280]
25P_obovata ...... [1280]
←trnS-trnG| atpH-atpI→
*
Variable site [ 1354 ]
01Er_Qiao CGTTAAGTTC CCTGACGAAA CACCTAATTC TCATGATTAT TTCTGGTTAA TGATACAATC AACCGATGAA TTATAACTTC [1360]
02Jing_Yu ...... [1360]
03Jinxing_Xuelang ...... [1360]
04Luoyang_Hong ...... [1360]
05Die_Yun ...... [1360]
06Shanhu_Tai ...... [1360]
07Jingzhen_Xiu_Hongpao ...... [1360]
08Guanshi_Hongyu ...... [1360]
09Huaban_Bai ...... [1360]
10Fenmo_Shuanghui ...... [1360]
11Hetang_Yuese ...... [1360]
12P_ostii ...... [1360]
13Hongban_Bai ...... [1360]
14Rou_Furong ...... G...... [1360]
15Fengdan_Fen ...... G...... [1360]
16Fenmian_Taosai ...... G...... [1360]
17Hei_Fengdie ...... [1360]
18Heiban_Bai ...... [1360]
19Xuehai_Danxin ...... [1360]
20Yao_Huang ...... [1360]
21Dou_Lü ...... [1360]
22Luorong_Hong ...... [1360]
23Da_Huhong ...... [1360]
24Shou’an_Hong ...... [1360]
25P_obovata ...... G...... [1360]
Variable site [ 1393 ]
01Er_Qiao ATTATTCTAT CGCTACGACT CATCAAGTTA CAATAACTAC GAACTCTGAA TTGAAGTAAA AATATTAATT ATGGAATCTT [1440]
02Jing_Yu ...... [1440]
03Jinxing_Xuelang ...... [1440]
04Luoyang_Hong ...... [1440]
05Die_Yun ...... [1440]
06Shanhu_Tai ...... [1440]
07Jingzhen_Xiu_Hongpao ...... [1440]
08Guanshi_Hongyu ...... [1440]
09Huaban_Bai ...... [1440]
10Fenmo_Shuanghui ...... [1440]
11Hetang_Yuese ...... [1440]
12P_ostii ...... [1440]
13Hongban_Bai ...... [1440]
14Rou_Furong ...... [1440]
15Fengdan_Fen ...... [1440]
16Fenmian_Taosai ...... [1440]
17Hei_Fengdie ...... [1440]
18Heiban_Bai ...... [1440]
19Xuehai_Danxin ...... [1440]
20Yao_Huang ...... [1440]
21Dou_Lü ...... [1440]
22Luorong_Hong ...... [1440]
23Da_Huhong ...... [1440]
24Shou’an_Hong ...... [1440]
25P_obovata ...... G...... [1440]
*
Variable site [ 1452 ]
01Er_Qiao CAGAACTACT TCAATATCTC TTTTTTAGTT TCTATCCCCC GCGAAGTCTT TGTGAATCCC TACGACTTTA GTTCTTCCAT [1520]
02Jing_Yu ...... [1520]
03Jinxing_Xuelang ...... [1520]
04Luoyang_Hong ...... [1520]
05Die_Yun ...... [1520]
06Shanhu_Tai ...... [1520]
07Jingzhen_Xiu_Hongpao ...... [1520]
08Guanshi_Hongyu ...... [1520]
09Huaban_Bai ...... [1520]
10Fenmo_Shuanghui ...... [1520]
11Hetang_Yuese ...... [1520]
12P_ostii ...... T...... [1520]
13Hongban_Bai ...... T...... [1520]
14Rou_Furong ...... [1520]
15Fengdan_Fen ...... [1520]
16Fenmian_Taosai ...... [1520]
17Hei_Fengdie ...... [1520]
18Heiban_Bai ...... [1520]
19Xuehai_Danxin ...... [1520]
20Yao_Huang ...... [1520]
21Dou_Lü ...... [1520]
22Luorong_Hong ...... [1520]
23Da_Huhong ...... [1520]
24Shou’an_Hong ...... [1520]
25P_obovata ...... [1520]
01Er_Qiao TTCTTTGTTC CGAACCATTC TTGGAAGTCC TCGTTCTTTA TTTTATGTGA TCTCTTTATT CATTCAATTC GGACGAAACG [1600]
02Jing_Yu ...... [1600]
03Jinxing_Xuelang ...... [1600]
04Luoyang_Hong ...... [1600]
05Die_Yun ...... [1600]
06Shanhu_Tai ...... [1600]
07Jingzhen_Xiu_Hongpao ...... [1600]
08Guanshi_Hongyu ...... [1600]
09Huaban_Bai ...... [1600]
10Fenmo_Shuanghui ...... [1600]
11Hetang_Yuese ...... [1600]
12P_ostii ...... [1600]
13Hongban_Bai ...... [1600]
14Rou_Furong ...... [1600]
15Fengdan_Fen ...... [1600]
16Fenmian_Taosai ...... [1600]
17Hei_Fengdie ...... [1600]
18Heiban_Bai ...... [1600]
19Xuehai_Danxin ...... [1600]
20Yao_Huang ...... [1600]
21Dou_Lü ...... [1600]
22Luorong_Hong ...... [1600]
23Da_Huhong ...... [1600]
24Shou’an_Hong ...... [1600]
25P_obovata ...... [1600]
01Er_Qiao GAAGGGCTTC TATTGGAATC CCCATCTAAA TTGACAGTAG TTAGGGCAAA TTAGATATAT TATATCTTTA GTTCATATAA [1680]
02Jing_Yu ...... [1680]
03Jinxing_Xuelang ...... [1680]
04Luoyang_Hong ...... [1680]
05Die_Yun ...... [1680]
06Shanhu_Tai ...... [1680]
07Jingzhen_Xiu_Hongpao ...... [1680]
08Guanshi_Hongyu ...... [1680]
09Huaban_Bai ...... [1680]
10Fenmo_Shuanghui ...... [1680]
11Hetang_Yuese ...... [1680]
12P_ostii ...... [1680]
13Hongban_Bai ...... [1680]
14Rou_Furong ...... [1680]
15Fengdan_Fen ...... [1680]
16Fenmian_Taosai ...... [1680]
17Hei_Fengdie ...... [1680]
18Heiban_Bai ...... [1680]
19Xuehai_Danxin ...... [1680]
20Yao_Huang ...... [1680]
21Dou_Lü ...... [1680]
22Luorong_Hong ...... [1680]
23Da_Huhong ...... [1680]
24Shou’an_Hong ...... [1680]
25P_obovata ...... [1680]
Variable site [ 1714, 1740 ]
01Er_Qiao CTAGTCAATT ATAACATATA CATGTGTTTC TTCCATGACG TAAACCGATT AATTCGTTTC ATCGGATTCT TATAAATCAT [1760]
02Jing_Yu ...... [1760]
03Jinxing_Xuelang ...... [1760]
04Luoyang_Hong ...... [1760]
05Die_Yun ...... [1760]
06Shanhu_Tai ...... [1760]
07Jingzhen_Xiu_Hongpao ...... [1760]
08Guanshi_Hongyu ...... [1760]
09Huaban_Bai ...... [1760]
10Fenmo_Shuanghui ...... [1760]
11Hetang_Yuese ...... [1760]
12P_ostii ...... [1760]
13Hongban_Bai ...... [1760]
14Rou_Furong ...... [1760]
15Fengdan_Fen ...... [1760]
16Fenmian_Taosai ...... [1760]
17Hei_Fengdie ...... [1760]
18Heiban_Bai ...... [1760]
19Xuehai_Danxin ...... [1760]
20Yao_Huang ...... [1760]
21Dou_Lü ...... [1760]
22Luorong_Hong ...... [1760]
23Da_Huhong ...... [1760]
24Shou’an_Hong ...... [1760]
25P_obovata ...... T...... A ...... [1760]
01Er_Qiao TCTTCGAAAC ATCTACAAGA GTTAGCTTAT GCTTATAGCC ATTAAATCGC ATAGACCTAG TTCAACGACC TAGTTCAACC [1840]
02Jing_Yu ...... [1840]
03Jinxing_Xuelang ...... [1840]
04Luoyang_Hong ...... [1840]
05Die_Yun ...... [1840]
06Shanhu_Tai ...... [1840]
07Jingzhen_Xiu_Hongpao ...... [1840]
08Guanshi_Hongyu ...... [1840]
09Huaban_Bai ...... [1840]
10Fenmo_Shuanghui ...... [1840]
11Hetang_Yuese ...... [1840]
12P_ostii ...... [1840]
13Hongban_Bai ...... [1840]
14Rou_Furong ...... [1840]
15Fengdan_Fen ...... [1840]
16Fenmian_Taosai ...... [1840]
17Hei_Fengdie ...... [1840]
18Heiban_Bai ...... [1840]
19Xuehai_Danxin ...... [1840]
20Yao_Huang ...... [1840]
21Dou_Lü ...... [1840]
22Luorong_Hong ...... [1840]
23Da_Huhong ...... [1840]
24Shou’an_Hong ...... [1840]
25P_obovata ...... [1840]
Variable site [ 1890, 1905 ]
01Er_Qiao TCCTCTACTA ACCCGCCTAT TTTTTATGAA TCTACTTTAT TTGTAAACTT TTTTACTCCT TTTCGTTATC ATTATCCTAG [1920]
02Jing_Yu ...... [1920]
03Jinxing_Xuelang ...... [1920]
04Luoyang_Hong ...... [1920]
05Die_Yun ...... [1920]
06Shanhu_Tai ...... [1920]
07Jingzhen_Xiu_Hongpao ...... [1920]
08Guanshi_Hongyu ...... [1920]
09Huaban_Bai ...... [1920]
10Fenmo_Shuanghui ...... [1920]
11Hetang_Yuese ...... [1920]
12P_ostii ...... [1920]
13Hongban_Bai ...... [1920]
14Rou_Furong ...... [1920]
15Fengdan_Fen ...... [1920]
16Fenmian_Taosai ...... [1920]
17Hei_Fengdie ...... [1920]
18Heiban_Bai ...... [1920]
19Xuehai_Danxin ...... [1920]
20Yao_Huang ...... [1920]
21Dou_Lü ...... [1920]
22Luorong_Hong ...... [1920]
23Da_Huhong ...... [1920]
24Shou’an_Hong ...... [1920]
25P_obovata ...... C ...... A...... [1920]
*
Variable site [ 1942, 1975 ]
01Er_Qiao ATGGAGACAA TTTAAAAGGA TGAATTCATT AGGCTGAATC GTTGCTTTGA TTTTGATTGA TCTAAGCTAA GTTCATGCAA [2000]
02Jing_Yu ...... [2000]
03Jinxing_Xuelang ...... [2000]
04Luoyang_Hong ...... [2000]
05Die_Yun ...... [2000]
06Shanhu_Tai ...... [2000]
07Jingzhen_Xiu_Hongpao ...... [2000]
08Guanshi_Hongyu ...... [2000]
09Huaban_Bai ...... [2000]
10Fenmo_Shuanghui ...... [2000]
11Hetang_Yuese ...... [2000]
12P_ostii ...... A...... [2000]
13Hongban_Bai ...... A...... [2000]
14Rou_Furong ...... A...... [2000]
15Fengdan_Fen ...... A...... [2000]
16Fenmian_Taosai ...... A...... [2000]
17Hei_Fengdie ...... A...... [2000]
18Heiban_Bai ...... A...... [2000]
19Xuehai_Danxin ...... A...... [2000]
20Yao_Huang ...... A...... [2000]
21Dou_Lü ...... A...... [2000]
22Luorong_Hong ...... A...... [2000]
23Da_Huhong ...... A...... [2000]
24Shou’an_Hong ...... A...... [2000]
25P_obovata ...... A...... [2000]
←atpH-atpI | accD-psaI→
*
Variable site [ 2008, 2023 ]
01Er_Qiao TTTATTATAA TTTTATTTTT TCTATAAGGG CTTATTCGAC CCAATTGTAC CACGTAATCC TTTAAAGGGT GTTCTGAGTG [2080]
02Jing_Yu ...... [2080]
03Jinxing_Xuelang ...... [2080]
04Luoyang_Hong ...... [2080]
05Die_Yun ...... [2080]
06Shanhu_Tai ...... [2080]
07Jingzhen_Xiu_Hongpao ...... [2080]
08Guanshi_Hongyu ...... [2080]
09Huaban_Bai ...... [2080]
10Fenmo_Shuanghui ...... [2080]
11Hetang_Yuese ...... [2080]
12P_ostii ...... A...... [2080]
13Hongban_Bai ...... A...... [2080]
14Rou_Furong ...... [2080]
15Fengdan_Fen ...... [2080]
16Fenmian_Taosai ...... [2080]
17Hei_Fengdie ...... [2080]
18Heiban_Bai ...... [2080]
19Xuehai_Danxin ...... [2080]
20Yao_Huang ...... [2080]
21Dou_Lü ...... [2080]
22Luorong_Hong ...... [2080]
23Da_Huhong ...... [2080]
24Shou’an_Hong ...... [2080]
25P_obovata ...... C...... [2080]
*
Variable site [ 2097, 2133, 2153 ]
01Er_Qiao AGTTATTTCA GCTCCACACT TTCTTTCCTT TGACTTTGAA TACAAATTCA ATTAAGTAGC GTTTTTAAAA TTATATTGTG [2160]
02Jing_Yu ...... [2160]
03Jinxing_Xuelang ...... [2160]
04Luoyang_Hong ...... [2160]
05Die_Yun ...... [2160]
06Shanhu_Tai ...... [2160]
07Jingzhen_Xiu_Hongpao ...... [2160]
08Guanshi_Hongyu ...... [2160]
09Huaban_Bai ...... [2160]
10Fenmo_Shuanghui ...... [2160]
11Hetang_Yuese ...... C...... [2160]
12P_ostii ...... C...... [2160]
13Hongban_Bai ...... C...... [2160]
14Rou_Furong ...... C...... [2160]
15Fengdan_Fen ...... C...... [2160]
16Fenmian_Taosai ...... C...... [2160]
17Hei_Fengdie ...... C...... [2160]
18Heiban_Bai ...... C...... [2160]
19Xuehai_Danxin ...... C...... [2160]
20Yao_Huang ...... C...... [2160]
21Dou_Lü ...... C...... [2160]
22Luorong_Hong ...... C...... [2160]
23Da_Huhong ...... C...... [2160]
24Shou’an_Hong ...... C...... [2160]
25P_obovata ...... T...... C...... C...... [2160]
* * *
Variable site [ 2183, 2221, 2230, 2235,2237 ]
01Er_Qiao AATTAATTAT CAGAATCAAA GTTAAAATCA GAAGAATGAG GTTTGCGTTT TCTTTGGTGA TATAAGATCT AATTGTAATA [2240]
02Jing_Yu ...... [2240]
03Jinxing_Xuelang ...... [2240]
04Luoyang_Hong ...... [2240]
05Die_Yun ...... [2240]
06Shanhu_Tai ...... [2240]
07Jingzhen_Xiu_Hongpao ...... [2240]
08Guanshi_Hongyu ...... [2240]
09Huaban_Bai ...... [2240]
10Fenmo_Shuanghui ...... [2240]
11Hetang_Yuese ...... C...... [2240]
12P_ostii ...... C...... A.G... [2240]
13Hongban_Bai ...... C...... A.G... [2240]
14Rou_Furong ...... C...... [2240]
15Fengdan_Fen ...... C...... [2240]
16Fenmian_Taosai ...... C...... [2240]
17Hei_Fengdie ...... C...... [2240]
18Heiban_Bai ...... C...... [2240]
19Xuehai_Danxin ...... C...... [2240]
20Yao_Huang ...... C...... [2240]
21Dou_Lü ...... C...... [2240]
22Luorong_Hong ...... C...... [2240]
23Da_Huhong ...... C...... [2240]
24Shou’an_Hong ...... C...... [2240]
25P_obovata ...... G...... C...... G ...... [2240]
Variable site [ 2296 ]
01Er_Qiao AAGAATCAAA CAAAAATTGC CAATTGTTTT TACCATGTTC TTGATTAGTA ATAGTAGTAA TCAGACAGTA AGATAAAAGA [2320]
02Jing_Yu ...... [2320]
03Jinxing_Xuelang ...... [2320]
04Luoyang_Hong ...... [2320]
05Die_Yun ...... [2320]
06Shanhu_Tai ...... [2320]
07Jingzhen_Xiu_Hongpao ...... [2320]
08Guanshi_Hongyu ...... [2320]
09Huaban_Bai ...... [2320]
10Fenmo_Shuanghui ...... [2320]
11Hetang_Yuese ...... C...... [2320]
12P_ostii ...... [2320]
13Hongban_Bai ...... [2320]
14Rou_Furong ...... [2320]
15Fengdan_Fen ...... [2320]
16Fenmian_Taosai ...... [2320]
17Hei_Fengdie ...... [2320]
18Heiban_Bai ...... [2320]
19Xuehai_Danxin ...... [2320]
20Yao_Huang ...... [2320]
21Dou_Lü ...... [2320]
22Luorong_Hong ...... [2320]
23Da_Huhong ...... [2320]
24Shou’an_Hong ...... [2320]
25P_obovata ...... [2320]
*
Variable site [ 2342, 2369 ]
01Er_Qiao GCGGATTGGA TTCTTCTTTT CGCGAAATTA AGCAAGGTAA AATAAAACGA ATTTCATGTT ATCCTTTACG TATGTATAGA [2400]
02Jing_Yu ...... [2400]
03Jinxing_Xuelang ...... [2400]
04Luoyang_Hong ...... [2400]
05Die_Yun ...... [2400]
06Shanhu_Tai ...... [2400]
07Jingzhen_Xiu_Hongpao ...... [2400]
08Guanshi_Hongyu ...... [2400]
09Huaban_Bai ...... [2400]
10Fenmo_Shuanghui ...... [2400]
11Hetang_Yuese ...... [2400]
12P_ostii ...... A...... [2400]
13Hongban_Bai ...... A...... [2400]
14Rou_Furong ...... [2400]
15Fengdan_Fen ...... [2400]
16Fenmian_Taosai ...... [2400]
17Hei_Fengdie ...... [2400]
18Heiban_Bai ...... [2400]
19Xuehai_Danxin ...... [2400]
20Yao_Huang ...... [2400]
21Dou_Lü ...... [2400]
22Luorong_Hong ...... [2400]
23Da_Huhong ...... [2400]
24Shou’an_Hong ...... [2400]
25P_obovata ...... A...... [2400]
* * *
Variable site [ 2425, 2438, 2443, 2466 ]
01Er_Qiao TAATAGAAAT AGAATTCAAA TATATATCGA AATAGAAAGA GATGTCTTGC ATTTTTATAT ATCTCCCGCC AACTCCCATT [2480]
02Jing_Yu ...... [2480]
03Jinxing_Xuelang ...... [2480]
04Luoyang_Hong ...... [2480]
05Die_Yun ...... [2480]
06Shanhu_Tai ...... [2480]
07Jingzhen_Xiu_Hongpao ...... [2480]
08Guanshi_Hongyu ...... [2480]
09Huaban_Bai ...... [2480]
10Fenmo_Shuanghui ...... [2480]
11Hetang_Yuese ...... C...... T...... [2480]
12P_ostii ...... G.. ..C...... T...... [2480]
13Hongban_Bai ...... G.. ..C...... T...... [2480]
14Rou_Furong ...... G.. ..C...... T...... [2480]
15Fengdan_Fen ...... G.. ..C...... T...... [2480]
16Fenmian_Taosai ...... G.. ..C...... T...... [2480]
17Hei_Fengdie ...... G.. ..C...... T...... [2480]
18Heiban_Bai ...... G.. ..C...... T...... [2480]
19Xuehai_Danxin ...... G.. ..C...... T...... [2480]
20Yao_Huang ...... G.. ..C...... T...... [2480]
21Dou_Lü ...... G.. ..C...... T...... [2480]
22Luorong_Hong ...... G.. ..C...... T...... [2480]
23Da_Huhong ...... G.. ..C...... T...... [2480]
24Shou’an_Hong ...... G.. ..C...... T...... [2480]
25P_obovata ...... G...... C...... [2480]
Variable site [ 2485, 2511 ]
01Er_Qiao TTTACTAAAA ATGGAGTCGG ATTCTAACGA AAATCTTTCG GAAATTTGTA AGAAACTTTT TCTTTTTCAT TTCGTTCTAC [2560]
02Jing_Yu ...... [2560]
03Jinxing_Xuelang ...... [2560]
04Luoyang_Hong ...... [2560]
05Die_Yun ...... [2560]
06Shanhu_Tai ...... [2560]
07Jingzhen_Xiu_Hongpao ...... [2560]
08Guanshi_Hongyu ...... [2560]
09Huaban_Bai ...... [2560]
10Fenmo_Shuanghui ...... [2560]
11Hetang_Yuese ...... [2560]
12P_ostii ...... [2560]
13Hongban_Bai ...... [2560]
14Rou_Furong ...... [2560]
15Fengdan_Fen ...... [2560]
16Fenmian_Taosai ...... [2560]
17Hei_Fengdie ...... [2560]
18Heiban_Bai ...... [2560]
19Xuehai_Danxin ...... [2560]
20Yao_Huang ...... [2560]
21Dou_Lü ...... [2560]
22Luorong_Hong ...... [2560]
23Da_Huhong ...... [2560]
24Shou’an_Hong ...... [2560]
25P_obovata ....G...... G...... [2560]
←accD-psaI | trnT-trnF→
Variable site [ 2584, 2623,2624,2626 ]
01Er_Qiao ATTACTTGCA CTTATTATAT ACTCACTTAT AGTTATAGTA TAATTATTAT AAGATATCTT TATAACACTA TCTACCGATT [2640]
02Jing_Yu ...... [2640]
03Jinxing_Xuelang ...... [2640]
04Luoyang_Hong ...... [2640]
05Die_Yun ...... [2640]
06Shanhu_Tai ...... [2640]
07Jingzhen_Xiu_Hongpao ...... [2640]
08Guanshi_Hongyu ...... [2640]
09Huaban_Bai ...... [2640]
10Fenmo_Shuanghui ...... [2640]
11Hetang_Yuese ...... [2640]
12P_ostii ...... [2640]
13Hongban_Bai ...... [2640]
14Rou_Furong ...... [2640]
15Fengdan_Fen ...... [2640]
16Fenmian_Taosai ...... [2640]
17Hei_Fengdie ...... [2640]
18Heiban_Bai ...... [2640]
19Xuehai_Danxin ...... [2640]
20Yao_Huang ...... [2640]
21Dou_Lü ...... [2640]
22Luorong_Hong ...... [2640]
23Da_Huhong ...... [2640]
24Shou’an_Hong ...... [2640]
25P_obovata ...... T...... AT.A...... [2640]
*
Variable site [ 2655, 2698 ]
01Er_Qiao TCGCCATATC CCCC-TTTTT CTTTCATTTC TTTTATGCTG GAACCTAGAA ACCTATTCTT ATTATCGAAA AGTCTTTCCT [2720]
02Jing_Yu ...... -...... [2720]
03Jinxing_Xuelang ...... -...... [2720]
04Luoyang_Hong ...... -...... [2720]
05Die_Yun ...... -...... [2720]
06Shanhu_Tai ...... -...... [2720]
07Jingzhen_Xiu_Hongpao ...... -...... [2720]
08Guanshi_Hongyu ...... -...... [2720]
09Huaban_Bai ...... -...... [2720]
10Fenmo_Shuanghui ...... -...... [2720]
11Hetang_Yuese ...... C...... [2720]
12P_ostii ...... -...... [2720]
13Hongban_Bai ...... -...... [2720]
14Rou_Furong ...... -...... T...... [2720]
15Fengdan_Fen ...... -...... T...... [2720]
16Fenmian_Taosai ...... -...... T...... [2720]
17Hei_Fengdie ...... -...... T...... [2720]
18Heiban_Bai ...... -...... T...... [2720]
19Xuehai_Danxin ...... -...... T...... [2720]
20Yao_Huang ...... -...... T...... [2720]
21Dou_Lü ...... -...... T...... [2720]
22Luorong_Hong ...... -...... T...... [2720]
23Da_Huhong ...... -...... T...... [2720]
24Shou’an_Hong ...... -...... T...... [2720]
25P_obovata ...... C...... [2720]
Variable site [ 2733,2734 ]
01Er_Qiao CCTATTTTTT TTTGTCGCCC TTCTTTCCTG TATTTGGAAC TCTAATCAGA AATGATTCTA TCATTTCTGT ATCCACAATT [2800]
02Jing_Yu ...... [2800]
03Jinxing_Xuelang ...... [2800]
04Luoyang_Hong ...... [2800]
05Die_Yun ...... [2800]
06Shanhu_Tai ...... [2800]
07Jingzhen_Xiu_Hongpao ...... [2800]
08Guanshi_Hongyu ...... [2800]
09Huaban_Bai ...... [2800]
10Fenmo_Shuanghui ...... [2800]
11Hetang_Yuese ...... T...... [2800]
12P_ostii ...... [2800]
13Hongban_Bai ...... [2800]
14Rou_Furong ...... [2800]
15Fengdan_Fen ...... [2800]
16Fenmian_Taosai ...... [2800]
17Hei_Fengdie ...... [2800]
18Heiban_Bai ...... [2800]
19Xuehai_Danxin ...... [2800]
20Yao_Huang ...... [2800]
21Dou_Lü ...... [2800]
22Luorong_Hong ...... [2800]
23Da_Huhong ...... [2800]
24Shou’an_Hong ...... [2800]
25P_obovata ...... -...... [2800]
01Er_Qiao CAATATAGAT GGATATATAC CATAATATAT TCTTTTCTTC CTCTCGCTTT CCCATGCAAT TTGGACTACT CGAACGGTCG [2880]
02Jing_Yu ...... [2880]
03Jinxing_Xuelang ...... [2880]
04Luoyang_Hong ...... [2880]
05Die_Yun ...... [2880]
06Shanhu_Tai ...... [2880]
07Jingzhen_Xiu_Hongpao ...... [2880]
08Guanshi_Hongyu ...... [2880]
09Huaban_Bai ...... [2880]
10Fenmo_Shuanghui ...... [2880]
11Hetang_Yuese ...... [2880]
12P_ostii ...... [2880]
13Hongban_Bai ...... [2880]
14Rou_Furong ...... [2880]
15Fengdan_Fen ...... [2880]
16Fenmian_Taosai ...... [2880]
17Hei_Fengdie ...... [2880]
18Heiban_Bai ...... [2880]
19Xuehai_Danxin ...... [2880]
20Yao_Huang ...... [2880]
21Dou_Lü ...... [2880]
22Luorong_Hong ...... [2880]
23Da_Huhong ...... [2880]
24Shou’an_Hong ...... [2880]
25P_obovata ...... [2880]
* *
Variable site [ 2899--2903, 2917, 2929, 2939 ]
01Er_Qiao ATTCTTTTTT TTTTTTTTTT ---CGTCCAG GCTTCCTCCT TTCTTTTCGA ATGAAAGCAG AGGAATGTCC CATTATAATC [2960]
02Jing_Yu ...... ---...... [2960]
03Jinxing_Xuelang ...... ---...... [2960]
04Luoyang_Hong ...... ---...... [2960]
05Die_Yun ...... ---...... [2960]
06Shanhu_Tai ...... ---...... [2960]
07Jingzhen_Xiu_Hongpao ...... ---...... [2960]
08Guanshi_Hongyu ...... ---...... [2960]
09Huaban_Bai ...... ---...... [2960]
10Fenmo_Shuanghui ...... ---...... [2960]
11Hetang_Yuese ...... T--...... C...... [2960]
12P_ostii ...... ---...... A...... C...... [2960]
13Hongban_Bai ...... ---...... A...... C...... [2960]
14Rou_Furong ...... -- ---...... C...... [2960]
15Fengdan_Fen ...... -- ---...... C...... [2960]
16Fenmian_Taosai ...... -- ---...... C...... [2960]
17Hei_Fengdie ...... -- ---...... C...... [2960]
18Heiban_Bai ...... -- ---...... C...... [2960]
19Xuehai_Danxin ...... -- ---...... C...... [2960]
20Yao_Huang ...... -- ---...... C...... [2960]
21Dou_Lü ...... -- ---...... C...... [2960]
22Luorong_Hong ...... -- ---...... C...... [2960]
23Da_Huhong ...... -- ---...... C...... [2960]
24Shou’an_Hong ...... -- ---...... C...... [2960]
25P_obovata ...... TTT...... C...... C...... [2960]
Variable site [ 3032 ]
01Er_Qiao TGGATTGCAT CTTTTTCTTT CGTTTTTATT CTCTTCTTAG GGCAGACCAG ACCTTGGAAA TTCATTCATT TCATTATTTA [3040]
02Jing_Yu ...... [3040]
03Jinxing_Xuelang ...... [3040]
04Luoyang_Hong ...... [3040]
05Die_Yun ...... [3040]
06Shanhu_Tai ...... [3040]
07Jingzhen_Xiu_Hongpao ...... [3040]
08Guanshi_Hongyu ...... [3040]
09Huaban_Bai ...... [3040]
10Fenmo_Shuanghui ...... [3040]
11Hetang_Yuese ...... [3040]
12P_ostii ...... [3040]
13Hongban_Bai ...... [3040]
14Rou_Furong ...... [3040]
15Fengdan_Fen ...... [3040]
16Fenmian_Taosai ...... [3040]
17Hei_Fengdie ...... [3040]
18Heiban_Bai ...... [3040]
19Xuehai_Danxin ...... [3040]
20Yao_Huang ...... [3040]
21Dou_Lü ...... [3040]
22Luorong_Hong ...... [3040]
23Da_Huhong ...... [3040]
24Shou’an_Hong ...... [3040]
25P_obovata ...... A...... [3040]
01Er_Qiao TTATAGCTAT AAACTAATCA TTCTATTAAT ATTTATTCGA GAATAATTAT AATAATAGCT GTTGATTTTT GATAAATGGA [3120]
02Jing_Yu ...... [3120]
03Jinxing_Xuelang ...... [3120]
04Luoyang_Hong ...... [3120]
05Die_Yun ...... [3120]
06Shanhu_Tai ...... [3120]
07Jingzhen_Xiu_Hongpao ...... [3120]
08Guanshi_Hongyu ...... [3120]
09Huaban_Bai ...... [3120]
10Fenmo_Shuanghui ...... [3120]
11Hetang_Yuese ...... [3120]
12P_ostii ...... [3120]
13Hongban_Bai ...... [3120]
14Rou_Furong ...... [3120]
15Fengdan_Fen ...... [3120]
16Fenmian_Taosai ...... [3120]
17Hei_Fengdie ...... [3120]
18Heiban_Bai ...... [3120]
19Xuehai_Danxin ...... [3120]
20Yao_Huang ...... [3120]
21Dou_Lü ...... [3120]
22Luorong_Hong ...... [3120]
23Da_Huhong ...... [3120]
24Shou’an_Hong ...... [3120]
25P_obovata ...... [3120]
Variable site [ 3157, 3163--3168 ]
01Er_Qiao TCCAAATTAT ATTATCTATC GCTTAGTCTA TTAATCGTTA TT------TT CTATAATATT GAATCTATAT ATTTATTATT [3200]
02Jing_Yu ...... ------...... [3200]
03Jinxing_Xuelang ...... ------...... [3200]
04Luoyang_Hong ...... ------...... [3200]
05Die_Yun ...... ------...... [3200]
06Shanhu_Tai ...... ------...... [3200]
07Jingzhen_Xiu_Hongpao ...... ------...... [3200]
08Guanshi_Hongyu ...... ------...... [3200]
09Huaban_Bai ...... ------...... [3200]
10Fenmo_Shuanghui ...... ------...... [3200]
11Hetang_Yuese ...... A... ..------...... [3200]
12P_ostii ...... ------...... [3200]
13Hongban_Bai ...... ------...... [3200]
14Rou_Furong ...... ------...... [3200]
15Fengdan_Fen ...... ------...... [3200]
16Fenmian_Taosai ...... ------...... [3200]
17Hei_Fengdie ...... ------...... [3200]
18Heiban_Bai ...... ------...... [3200]
19Xuehai_Danxin ...... ------...... [3200]
20Yao_Huang ...... ------...... [3200]
21Dou_Lü ...... ------...... [3200]
22Luorong_Hong ...... ------...... [3200]
23Da_Huhong ...... ------...... [3200]
24Shou’an_Hong ...... ------...... [3200]
25P_obovata ...... GTTATT...... [3200]
Variable site [ 3251 ]
01Er_Qiao TATTTTCTTC TATAATTCAT AGAAATTAAA TTATGAATAA CTAAGATTCC GGGCCCTGTA CTGAATTTCT ATGCAGGTAC [3280]
02Jing_Yu ...... [3280]
03Jinxing_Xuelang ...... [3280]
04Luoyang_Hong ...... [3280]
05Die_Yun ...... [3280]
06Shanhu_Tai ...... [3280]
07Jingzhen_Xiu_Hongpao ...... [3280]
08Guanshi_Hongyu ...... [3280]
09Huaban_Bai ...... [3280]
10Fenmo_Shuanghui ...... [3280]
11Hetang_Yuese ...... [3280]
12P_ostii ...... [3280]
13Hongban_Bai ...... [3280]
14Rou_Furong ...... [3280]
15Fengdan_Fen ...... [3280]
16Fenmian_Taosai ...... [3280]
17Hei_Fengdie ...... [3280]
18Heiban_Bai ...... [3280]
19Xuehai_Danxin ...... [3280]
20Yao_Huang ...... [3280]
21Dou_Lü ...... [3280]
22Luorong_Hong ...... [3280]
23Da_Huhong ...... [3280]
24Shou’an_Hong ...... [3280]
25P_obovata ...... A...... [3280]
←trnT-trnF|
Variable site [ 3282-3286 ]
01Er_Qiao AATTTCTGTT ATATGATATG TGAGCCCGCT TAGCTCAGAG GTTAGAGCAT CGCATTTGTA ATG [3343]
02Jing_Yu ...... [3343]
03Jinxing_Xuelang ...... [3343]
04Luoyang_Hong ...... [3343]
05Die_Yun ...... [3343]
06Shanhu_Tai ...... [3343]
07Jingzhen_Xiu_Hongpao ...... [3343]
08Guanshi_Hongyu ...... [3343]
09Huaban_Bai ...... [3343]
10Fenmo_Shuanghui ...... [3343]
11Hetang_Yuese ...... [3343]
12P_ostii .-----...... [3343]
13Hongban_Bai .-----...... [3343]
14Rou_Furong ...... [3343]
15Fengdan_Fen ...... [3343]
16Fenmian_Taosai ...... [3343]
17Hei_Fengdie ...... [3343]
18Heiban_Bai ...... [3343]
19Xuehai_Danxin ...... [3343]
20Yao_Huang ...... [3343]
21Dou_Lü ...... [3343]
22Luorong_Hong ...... [3343]
23Da_Huhong ...... [3343]
24Shou’an_Hong ...... [3343]
25P_obovata ...... [3343]
1