Abe N et al., Figure S1
E. reichenowi(AB194379) CAAGTCTGGT GCCAGCAGCC –GCGGTAATT CCAGCTCCAA TAGCGTATAT TAGAGTTGTT GCAGTTAAAA AGCTCGTAGT TGGATTTCTG TCGGTGCTAT CCGGTTCCGC CTGTATGG-G TGTGCACCAG GATTGGCTTC 140
E. gruis(AB194381) ·········· ·········· –········· ·········· ·········· ·········· ·········· ·········· ·········· ·········· ·········· ······A·-· ·········· ··········
E. furonis(AB329724) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ····CG···· ·C······-· ··C··G·GT· ·T···C·CG·
E. meleagrimitis(AF041437) ·········· ·········· -···-····· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·G T···CG···· ·C······C· ··C··G··T· ·T···C·CG·
E. alabamensis(AF291427) ·········· ·········· -···-····· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ····CG···· ·C······-· ··C·····T· ·T···C·CG·
E. necatrix(U67119) ·········· ·········· –········· ··G······· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ····CG···· ·C······-· ····GG··T· ·CA··C·C··
E. tenella(U67121) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ····CGT··· ·C······-· ····TG··T· ·CA··C·C··
E. adenoeides(AF324212) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TCGA ·····A···· ·C······-· ·····G··T· ·T···C·C··
E. maxima(U67117) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·G ·TT·CG·T·· ·C······-· ·····G·GT· ·T···C·C··
E. praecox(U67120) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·G ··T·CG·T·· ·C······-· ·····G·GT· ·T···C·C··
E. brunetti(U67116) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·G ··T·CG·T·· ·C······-· ·····G·GT· ·T···C·CG·
E. acervulina(U67115) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·G ··T·CG·T·· ·C······-· ·····G·GT· ·T···C·C··
E. mitis(U67118) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TCT· ··T··G·T·· ·C····C·-· ··--···GT· ·C···C·C··
E. mivati(U76748) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ··T·CG·T·· ·C······-· ·······GT· ·T···C·C··
Cyclo. cercopitheci(AF111184) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ····CCG··· ·C···G··-- ·····G··T· TG···C·CG·
Cyclo. colobi(AF111186) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ····CCG··· ·C···G··-- ·····G··T· ·G···C·CG·
Cyclo. papionis(AF111187) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· G···CCG··· ·C···G··-- ·····G··T· TG···C·CG·
Cyclo. cayetanensis(AF111183) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ····CCTT·· ·C···G··-- ·····G··T· ·G···C·CG·
E. falciformis(AF080614) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ·········· ········-· ·····G··T· ·T···C·C··
E. nieschulzi(U40263) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ·········· ·C······-· ·····G··T· ·T···C·C··
E. telekii(AF246717) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ·········· ·C······-· ········T· ·T···C·C··
E. separata(AF311643) ·········· ·········· –········· ·········· ···T······ ··A······· ·········· ·········· ·········· ···TG·TC·· ·········· ·C······-· ········T· ·T···C·C··
E. langebarteli(AF311640) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TCTA ····C····· ·C······-· ·····G··T· ·T···C·C··
E. scholtysecki(AF324216) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TCTA ·····A···· ·C······-· ········T· ·T···C·C··
E. papillata(AF311641) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ····C····· ·C······-· ·····G··T· ·T···C·C··
E. pilarensis(AF324215) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········T ···TG·TC·· ·········· ······A·-· ········T· ·TA··C·C··
E. albigulae(AF307880) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ·····A···· ·C······-· ········T· ·T···A·C··
E. peromysci(AF339492) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ·····A···· ·C······-· ········T· ·T···A·C··
E. leucopi(AF339491) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ·····A···· ·C······-· ········T· ·T···A·C··
E. onychomys(AF307879) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ·····A···· ·C······-· ········T· ·T···A·CC·
E. antrozi(AF307876) ·········· ·········· C········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ·····A···· ·C······-· ········T· ·T···A·C··
E. reedi(AF311642) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ·········· ·C······-· ········T· ·T···A·C··
E. rioarribaensis(AF307877) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ·····A···· ·C······-· ········T· ·T···A·C··
E. arizonensis(AF307878) ·········· ·········· C········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ·····A···· ·C······-· ········T· ·T···A·C··
E. castronensis(AF324213) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ·····A···· ·C······-· ········T· ·T···A·C··
E. chaetodipi(AF339489) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· ···TG·TC·· ·····A···· ·C······-· ········T· ·T···ATC··
E. chobotari(AF324214) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· C··TG·TCG· ·····G···· TC······-· ··C·····T· ACGA·--CA·
E. dipodomysis(AF339490) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ········T· ········A· C··TG·TC·· ·····G···· TC······–· ··C·····G· ACAA·--CA·
E. bovis(U77084) ·········· ·········· –···–····· ·········· ···T······ ·········· ·········· ·········· ·········· CT·TG·TC·· ·····A···· ·C······-- ··C·····T· ·T······C·
E. ovinoidalis(AF345997) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· CT·TG·TC·· ·····A···· ·C······-· ··C·····T· ·T······C·
E. crandallis(AF336339) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· CT·TG·TC·· ·····A···· ·C······-· ··C·····T· ·T······G·
E. weybridgensis(AY028972) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· CT·TG·TC·· ·····A···· ·C······-· ··C·····T· ·T······G·
E. ahsata(AF338350) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· CT·TG·TC·· ·····A···· ·C······-· ··C·····T· ·T······G·
E. faurei(AF345998) ·········· ·········· –········· ·········· ···T······ ·········· ·········· ·········· ·········· CT·TG·TC·· ·····A···· ·C···C··-· ··C·····T· ·T···T··G·
I. ohioensis(AF029303) ·········· ·········· –········· ·········· ·········· ··A······· ·········· ·········· ·········· CT··AAGC·G ··A··-···· ·CT··G··-· ····T··GT· ·TGAAAT·C·
I. belli(AF106935) ·········· ·········· –········· ·········· ·········· ··A······· ·········· ·········· ·········· CT··AAGC·G ··A··-···· ·CT··G··-· ····T··GT· ·TGAAAT·C·
E. reichenowi GGCATTTTTC CG--TAGCTT AATCCCGCTT AATTGCGTGG ATTGGGTGTT TCGGAACTTT TACTTTGAGA AAAATAGAGT GTTTCAAGCA GGCTTGTCGC CTTGAATACT GCAGCATGG- AATAATAA-G ATAGGACCTT 280
E. gruis ······C··· ··--······ ·········· C········· ····A····· ·········· ·········· ·········· ·········· ·········· ·········· ·········- ········-· ··········
E. furonis ···T·A···· ··--····C· T-C·G····· ·GC······T G···-····· ·········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. meleagrimitis ···T··C··· ··G-····C· T-C·G····· G·G······T G·C·T····· C········· ·········· ·········· ·········· ·CT·GT···· ·C········ ·········- ········-· ··········
E. alabamensis ···T··C··· ··GT··T·C· T-C·G····· ·········T G···-····· C········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. necatrix ···T·A···· ··G-····C· T-C·G····· ·········T G···-····· CT········ ·········· ·········· ·········· ·········· ·C········ ·········- ········-· ·········C
E. tenella ···T·A···· ··G-····C· T-C·G····· ·········T G···-····· CT········ ·········· ·········· ·········· ·········· ·C········ ·········- ········-· ·········C
E. adenoeides A··T·A···· ··G-····C· T-C·G····· ·········T G···-····· CT········ ·········· ·········· ·········· ·······T·· ·C········ ·········- ········-· ·········C
E. maxima ······C··· ··G-······ G-·GG····· ········CT GCAA-···CC CT········ ·········· ·········· ·········· ·········· ·C········ ·········- ·······G-· ·········C
E. praecox ·····A···· T·G-····C· C-·GG····· T·······T· G·A·-····· CT········ ·········· ·········· ·········· ·········· ·C········ ·········- ········-· ·········C
E. brunetti ···T··C··· ··G-····C· C-CGG·T··· ········C· G·G·-····· CT········ ·········· ·········· ·········· ·········· ·C········ ·········- ········-· ·········C
E. acervulina ···T······ T·G-····C· C-CTG····· ·········· GC··-····· C········· ·········· ·········· ·········· ·········· ·C········ ·········- ········-· ·········C
E. mitis ·A·T··C··· ··G-····C· C-CTG····· C·C······· GC··-····· CT········ ·········· ·········· ·········· ·-········ ·C········ ·········- ········-· ·········C
E. mivati ···T······ ··G-····C· C-CTG····· C·······T· G···-····· CT········ ·········· ·········· ·········· ·········· ·C········ ·········- ········-· ·········C
Cyclo. cercopitheci ···T··C··· ··G-····C· T-C·G····· C·G······T G···-····· C········· ·········· ·········· ·········· ·········· ·C········ ·········- ········-· ··········
Cyclo. colobi ···T··C··· ··G-····C· T-C·G····· C·C······T G···-····· C········· ·········· ·········· ·········· ·········· ·C········ ·········- ········-· ··········
Cyclo. papionis ···T··C··· ··G-····C· T-C·G····· C·C······C G···-····· C········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
Cyclo. cayetanensis ···T··C··· ··G-····C· T-C·G····· CGC······C G···-····· C········· ·········· ·········· ·········· ·········· ·C········ ·········- ········-· ··········
E. falciformis ···T··C··· ··TTAGC··· C--GG····· C·C·····CT G···-····· ·········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. nieschulzi ···T··C··· ··TTAGC··· C--GG····· C·······CT G···-····· ·········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. telekii ···T··C··· ··TT·GC··C T-·GG····· C·······CT T···-··T·· ·········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. separata C··T··C··· ·CTT·GC··C T-·GG····· C·······CT T···-··T·· ·········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. langebarteli ···T··C··· ··TT·GC··· C-AGG·T··· C·······CT G···-··T·· ·········· ·········· ·········· ·········· ·········· ·C········ T········- ········A· ··········
E. scholtysecki ······C··· ··AT·GC··· C-AGG·T··· C·······CT G···-··T·· ·········· ·········· ·········· ·········· ·········· ·C········ ·········- ········-· ··········
E. papillata ···T··C··· ··GTAGC··· C--·G····· C·C·····CT G···-····· ·········· ·········· ·········· –········· ·········· ·C········ T········- ········-· ··········
E. pilarensis ··A···C··· ··G-····C· T-C--····· C·······-- G···-····· C········· ·········· ·········· ·········· ·········· ·C········ ·········- ········-· ········C·
E. albigulae ···T··C··· ··G-····C· T-C·G····· C·C······- G···-····· C········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. peromysci ···T··C··· ··G-····C· T-C·G····· C·C······- G···-····· C········· ·········· ······T··· ·········· ·········· ·C········ T········G ········-· ··········
E. leucopi ···T··C··· ··G-····C· T-C·G····· C·C······- G···-····· C········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. onychomys ···T··C··· ··G-····C· T-C······· C·C······- G···-····· C········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. antrozi ···T··C··· ··G-····C· T-C·G····· C·C······- G···-····· C········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. reedi ···T··C··· ··G-····C· T-C·G····· C·C······- G···-····· C········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. rioarribaensis ···T··C··· ··G-····C· T-C·G····· C········- G···-····· C········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. arizonensis ···T··C··· ··G-····C· T-C·G····· C········- G···-····· C········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. castronensis ··AT··C··· ··G-····C· T-C·G·T··· ········C- G···-····· C········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. chaetodipi ···T··C··· ··G-····C· T-C·G·T··· C······C·- G···-····· C········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. chobotari ···T··C··· ··G-····CA ·-C·G····· C·C····C·- G···-····· C········· ·········· ·········· ·········· ·········· ·C········ T········- ········-· ··········
E. dipodomysis ···T··C··· ··G-····CC ·-C·G····· C·C····C·- G···-····· C·T······· ·········· ···-······ ·········· ·········· ·C········ T········- ········-· ··········
E. bovis ···T··C··· ·TG-····CG T-C·G····· ·········T ·C··-T-··· A········· ·········· ·········· ·········· ·········· ·C········ T········- ·······G-· ··········
E. ovinoidalis ···T··C··· ·TG-····CG T-C·G····· ·······C·T ·C··-T-··· A········· ·········· ·········· ·········· ·········· ·C········ T········- ·······G-· ··········
E. crandallis ···T··C··· ·TG-····CG T-C·G····· ·········C G···-T-··· A········· ·········· ·········· ·········· ·········· ·C········ T········- ·······G-· ··········
E. weybridgensis ···T··C··· ·TG-····CG T-C·G····· ·········C G···-T···· A········· ·········· ·········· ·········· ·········· ·C········ T········- ·······G-· ··········
E. ahsata ···T··C··· ·TG-····CG T-C·G····· ·········T G···-T-··· A········· ·········· ·········· ·········· ·········· ·C········ T········- ·······G-· ··········
E. faurei ···T··C··· ·TG-····CG T-C·G····· ·········T GG··-T-··· G········· ·········· ·········· ·········· ·········· ·C········ T········- ·······G-· ··········
I. ohioensis ······C·C· T·GTGGCGC· T--·G·A··· ··C··G···· ·G··-C·T·· C·A·GG···· ·········· ···T······ ·········· ·······T·· ·········· ·········- ········-· ······TT·C
I. belli ······C··· T·GAGGAGC· T--·G·A··· ··C··G···· ·G··-C·T·· C·A·G····· ·········· ···T······ ·········· ·······T·· ·········· ·········- ········-· ······TT·C
E. reichenowi GGTTCTATTT TGTTGGTTTC TAGGACTAAG GTAATGATTA ATAGGGACAG TTGGGGGCAT TCGTATTTAA CTGTC 355
E. gruis ·········· ·········· ·········· ·········· ·········· ·········· ·········· ·····
E. furonis ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. meleagrimitis ·········· ·········· ······C··· ·········· ·········· ·········· ·······G·· ·····
E. alabamensis ·········· ·········· ······C··· ······G··· ·········· ·········· ·········· ·····
E. necatrix ·········· ·········· ······C··· ·········· ·········· ·········· ·T········ ·····
E. tenella ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. adenoeides ·········· ·········· ······C··· ·········· ·········· ·········· ·T········ ·····
E. maxima ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. praecox ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. brunetti ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. acervulina ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. mitis ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. mivati ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
Cyclo. cercopitheci ·········· ·········· ······CG·· ·········· ·········· ·········· ·········· ·····
Cyclo. colobi ·········· ·········· ······CG·· ·········· ·········· ·········· ·········· ·····
Cyclo. papionis ·········· ·········· ······CG·· ·········· ·········· ·········· ·········· ·····
Cyclo. cayetanensis ·········· ·········· ······CG·· ·········· ·········· ·········· ·········· ·····
E. falciformis ·········· ·········· ·········· ·········· ·········· ·········· ·········· ·····
E. nieschulzi ·········· ·········· ·G········ ·········· ·········· ·········· ·········· ·····
E. telekii ·········· ·········· ·········· ·········· ·········· ·········· ·········· ·····
E. separata ·········· ·········· ·········· ·········· ·········· ·········· ·········· ·····
E. langebarteli ····A····· ·········· ·····G···· ·········· ·········· ·········· ·T········ ·····
E. scholtysecki ·········· ·········· ·········· ·········· ·········· ·········· ·········· ·····
E. papillata ·········· ·········· ·········· ·········· ·········· ·········· ·········· ·····
E. pilarensis ·········· ·········· ······CG·· ·········· ·········· ·········· ·········· ·····
E. albigulae ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. peromysci ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. leucopi ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. onychomys ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. antrozi ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. reedi ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. rioarribaensis ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. arizonensis ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. castronensis ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. chaetodipi ·········· ·········· ······C··· ·········· ·········· ·········· ·T········ ·····
E. chobotari ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. dipodomysis ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. bovis ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. ovinoidalis ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. crandallis ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. weybridgensis ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. ahsata ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
E. faurei ·········· ·········· ······C··· ·········· ·········· ·········· ·········· ·····
I. ohioensis ··CC······ ·········· ·······G·A ·········· ········G· ·········· ·········· ·····
I. belli ··CC······ ·········· ·······G·A ·········· ········G· ·········· ·········· ·····