Novel Transposable Elements in Solanaceae: Evolutionary Relationships among Tnt1-related Sequences in Wild Petunia Species

Plant Molecular Biology Reporter

Raquel A. Kriedt, Guilherme M.Q. Cruz, Sandro L. Bonatto and Loreta B. Freitas*

Laboratory of Molecular Evolution, Department of Genetics, Universidade Federal do Rio Grande do Sul, Bento Gonçalves 9500, PoBox 15053, 91501-970, Porto Alegre, RS, Brazil; E-Mail:

Supplementary Table S4 Accession numbers for Nicotiana and Solanun species analysed in this study.

SpeciesIdentification/ Isolate / AccessionNumber
Nicotiana plumbaginifolia
N. plu / AJ228044.1
plumb19 / AJ228056.1
plumb20 / AJ228057.1
plumb8 / AJ228045.1
plumb16 / AJ228053.1
plumb18 / AJ228055.1
N. glauca
glau18 / AJ228115.1
glau19 / AJ228116.1
glau20 / AJ228117.1
glau15 / AJ228112.1
N. tabacum
tab12 / AJ228009.1
tab10 / AJ228007.1
tab8 / AJ228005.1
tab9 / AJ228006.1
tab15 / AJ228012.1
tab18 / AJ228015.1
tab19 / AJ228016.1
tab20 / AJ228017.1
N. debneyi
deb14 / AJ228091.1
deb17 / AJ228094.1
deb15 / AJ228092.1
deb6 / AJ228083.1
deb19 / AJ228096.1
deb16 / AJ228093.1
deb20 / AJ228097.1
deb18 / AJ228095.1
N. benthamiana
ben19 / AJ228076.1
ben2 / AJ228059.1
ben20 / AJ228077.1
N. tomentosiformis
tom18 / AJ228135.1
tom20 / AJ228137.1
tom1 / AJ228118.1
tom2 / AJ228119.1
N. sylvestris
N. syl / AJ228035.1
syl20 / AJ228018.1
syl19 / AJ228036.1
syl1 / AJ228018.1
Solanun peruvianum
Lp1 / EF602668.1
Lp11 / EF602678.1
Lp12 / EF602679.1
Lp9 / EF602676.1
Lp10 / EF602677.1
Lp37 / EF602726.1
S. habrochaites
Lh10 / EF602696.1
Lh15 / EF602702.1
Lh20 / EF602707.1
Lh22 / EF602709.1
Lh9 / EF602698.1
Lh19 / EF602706.1
Lh21 / EF602654.1
S. lycopersicon
Le1 / EF602650.1
Le4 / EF602653.1
Le5 / EF602654.1
Le9 / EF602657.1
S. pimpinellifolium
Lpp1 / EF602630.1
Lpp17 / EF602646.1
Lpp18 / EF602647.1
Lpp19 / EF602648.1
Lpp20 / EF602630.1
Lpp3 / EF602632.1
S. spegazzinii
spg30 / EF620735.1
spg31 / EF620736.1
spg28 / F620734.1
S. sucrense
scr21 / F620725.1
scr24 / EF620727.1
scr23 / EF620726.1
S. tarijense
tar17 / EF620743.1
tar20 / EF620744.1
tar23 / EF620745.1
S. tuberosum
Tu19 / EF620757.1
Tu21 / EF620758.1
Tu23 / EF620759.1
S. vernei
ver2 / EF620761.1
ver3 / F620762.1
ver11 / F620763.1
S.commersonii
comm27 / EF620605.1
cmm29 / EF620606.1
cmm30 / EF620607.1
S. gourlayi
gou25 / EF620609.1
gou27 / EF620610.1
gou28 / EF620611.1
S. incamayoense
inc21 / EF620636.1
inc24 / EF620638.1
S. infundibuliforme
inf25 / EF620646.1
inf27 / EF620647.1
inf30 / EF620648.1
S. okadae
oka11 / EF620705.1
oka21 / EF620707.1
oka6 / EF620703.1
oka4 / EF620702.1
S. oplocense
opl25 / EF620708.1
opl26 / EF620709.1
S. acaule
acl19 / EF620569.1
acl20 / EF620572.1
acl21 / EF620573.1
S. leptophyes
Lph26 / EF620671.1
S. kurtzianum
ktz27 / EF620670.1
ktz25 / EF620669.1
ktz3 / EF620657.1
ktz11 / EF620662.1
ktz23 / EF620668.1
ktz16 / F620665.1
S. doddsii
dds27 / EF620608.1
S. chacoense
chc25 / EF620604.1
S. sanctae-rosae
sat9 / EF620713.1
sat10 / EF620714.1
sat23 / EF620715.1
S. megistacrolobum
mga19 / EF620681.1
mga20 / EF620682.1
mga30 / EF620683.1
S. palustre
bre27 / EF620584.1
bre30 / EF620585.1
bre31 / EF620586.1