Table S3. List of ≥ 2 fold DEGs
Up-regulated genes in leaf
S.No. / Locus ID / Annotation / Fold change / P-value1 / LOC_Os11g20310 / Shaggy-related protein kinase alpha / 66.42 / 1.0E-08
2 / LOC_Os12g27254 / 3-N-debenzoyl-2-deoxytaxol N-benzoyltransferase / 65.70 / 1.0E-04
3 / Leucine Rich Repeat family protein / 51.92 / 2.0E-08
4 / LOC_Os12g15222 / Expressed protein / 45.44 / 5.0E-08
5 / LOC_Os11g31770 / Hypothetical protein / 34.46 / 1.9E-07
6 / LOC_Os12g21784 / Hypothetical protein / 34.28 / 1.8E-06
7 / LOC_Os12g12560 / Putative NADP-dependent oxidoreductases / 29.81 / 1.2E-06
8 / LOC_Os12g12130 / Leucine-rich repeat (LRR) protein / 24.09 / 2.0E-08
9 / LOC_Os01g12320 / SGNH_plant_lipase_like; a plant specific subfamily of the SGNH-family of hydrolases / 20.37 / 8.0E-05
10 / LOC_Os12g14840 / BRCT domain containing protein / 15.80 / 2.4E-07
11 / LOC_Os12g16220 / Pinoresinol-lariciresinol reductase / 15.14 / 1.6E-05
12 / LOC_Os02g55000 / Zinc finger C-x8-C-x5-C-x3-H type; G-patch domain / 13.76 / 1.9E-05
13 / LOC_Os01g11860 / Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1 / 13.53 / 7.8E-07
14 / LOC_Os01g11860 / Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1 / 13.06 / 4.2E-05
15 / LOC_Os12g15314 / Staphylococcal nuclease homologue / 11.69 / 1.5E-07
16 / AK072652 / Hypothetical protein / 11.38 / 1.9E-06
17 / LOC_Os05g07640 / Hypothetical protein / 10.84 / 1.5E-05
18 / AK107801 / Hypothetical protein / 10.54 / 4.5E-06
19 / LOC_Os01g70720 / Hypothetical protein / 8.60 / 7.4E-07
20 / Transposon protein, / 6.84 / 1.5E-06
21 / LOC_Os02g50880 / OsDegp3 - Putative Deg protease homologue / 6.63 / 3.6E-06
22 / LOC_Os02g26790 / Expressed protein / 6.58 / 1.8E-06
23 / AK064516 / Hypothetical protein / 6.24 / 3.0E-05
24 / LOC_Os01g26130 / Expressed protein / 5.81 / 4.2E-05
25 / LOC_Os11g26780 / Putative dehydrin / 5.78 / 9.1E-03
26 / LOC_Os01g70720 / Expressed protein / 5.41 / 1.6E-05
27 / LOC_Os11g31770 / Expressed protein / 5.41 / 5.0E-05
28 / LOC_Os07g26150 / MYB family transcription factor / 5.41 / 1.7E-03
29 / LOC_Os05g02070 / Expressed protein / 5.39 / 1.2E-04
30 / AK120205 / Hypothetical protein / 5.39 / 4.5E-04
31 / LOC_Os05g02070 / expressed protein / 5.13 / 6.7E-05
32 / LOC_Os05g02070 / expressed protein / 4.77 / 1.9E-04
33 / pollen allergen, putative, expressed / 4.76 / 2.3E-04
34 / LOC_Os05g03600 / retrotransposon protein, putative, unclassified, expressed / 4.39 / 4.9E-04
35 / LOC_Os11g25160 / tropinone reductase 2, putative, expressed / 4.38 / 1.6E-04
36 / LOC_Os11g32410 / expressed protein / 4.30 / 1.7E-06
37 / LOC_Os01g32439 / expressed protein / 4.29 / 2.1E-06
38 / LOC_Os04g53214 / hydroxyacid oxidase 1, putative, expressed / 4.27 / 2.8E-04
39 / LOC_Os12g11370 / verticillium wilt disease resistance protein, putative, expressed / 4.10 / 1.4E-04
40 / LOC_Os12g16280 / expressed protein / 4.04 / 1.4E-05
41 / LOC_Os11g25160 / tropinone reductase 2, putative, expressed / 4.04 / 2.4E-06
42 / LOC_Os05g02070 / expressed protein / 4.01 / 1.1E-04
43 / LOC_Os02g53400 / thioredoxin, putative, expressed / 3.97 / 5.1E-06
44 / Ankyrin repeat / 3.95 / 1.3E-05
45 / OSMETALLO / expressed protein / 3.90 / 1.2E-04
46 / LOC_Os08g39830 / ethylene-insensitive 3, putative, expressed / 3.81 / 5.6E-07
47 / LOC_Os01g11860 / DJ-1 family protein, putative, expressed / 3.75 / 4.7E-04
48 / LOC_Os09g37540 / Lysine decarboxylase-like protein (At4g35190) n=1 Tax=Arabid / 3.49 / 4.5E-06
49 / LOC_Os02g01150 / erythronate-4-phosphate dehydrogenase domain containing protein, expressed / 3.42 / 2.1E-06
50 / LOC_Os02g46839 / Oligopeptide transporter / 3.38 / 1.8E-03
51 / LOC_Os12g10784 / 2-dehydro-3-deoxyphosphooctonate aldolase, putative, expressed / 3.38 / 3.5E-03
52 / LOC_Os02g54640 / glutamate receptor, putative, expressed / 3.35 / 3.6E-03
53 / LOC_Os02g53750 / tyrosine protein kinase domain containing protein, putative, expressed / 3.35 / 1.1E-05
54 / LOC_Os12g12170 / cytochrome b5-like Heme/Steroid binding domain containing protein, expressed / 3.32 / 7.0E-04
55 / LOC_Os12g16280 / expressed protein / 3.31 / 5.7E-06
56 / LOC_Os01g12920 / thioesterase family protein, putative, expressed / 3.15 / 1.4E-06
57 / LOC_Os01g62010 / hydrolase, alpha/beta fold family domain containing protein, expressed / 3.14 / 1.6E-03
58 / LOC_Os01g26130 / expressed protein / 3.02 / 3.8E-04
59 / LOC_Os11g32369 / expressed protein / 3.00 / 1.6E-05
60 / LOC_Os02g51020 / expressed protein / 2.91 / 4.1E-04
61 / LOC_Os02g05430 / expressed protein / 2.91 / 7.9E-05
62 / LOC_Os12g14440 / Jacalin-like lectin domain containing protein, putative, expressed / 2.90 / 7.3E-03
63 / LOC_Os01g70720 / expressed protein / 2.87 / 4.9E-04
64 / AK101768 / hypothetical protein / 2.86 / 2.2E-03
65 / AK106461 / hypothetical protein / 2.86 / 2.6E-03
66 / AK071232 / expressed protein / 2.84 / 1.5E-06
67 / LOC_Os01g62010 / hydrolase, alpha/beta fold family domain containing protein, expressed / 2.80 / 1.5E-03
68 / LOC_Os12g17430 / NBS-LRR disease resistance protein, putative, expressed / 2.74 / 1.2E-03
69 / LOC_Os11g31770 / expressed protein / 2.60 / 1.3E-04
70 / LOC_Os02g54254 / saccharopine dehydrogenase, putative, expressed / 2.56 / 3.1E-04
71 / AK072333 / Peptidase C48, SUMO/Sentrin/Ubl1 family protein / 2.55 / 9.5E-04
72 / LOC_Os01g73070 / expressed protein / 2.50 / 5.0E-03
73 / LOC_Os04g53350 / expressed protein / 2.47 / 1.5E-03
74 / LOC_Os01g52070 / potassium channel AKT1, putative, expressed / 2.46 / 1.2E-04
75 / LOC_Os04g09540 / acyl-protein thioesterase, putative, expressed / 2.46 / 1.6E-03
76 / LOC_Os01g73080 / expressed protein / 2.46 / 7.0E-06
77 / LOC_Os01g27360 / glutathione S-transferase, putative, expressed / 2.43 / 1.1E-04
78 / LOC_Os01g73080 / expressed protein / 2.42 / 1.7E-04
79 / LOC_Os08g39830 / ethylene-insensitive 3, putative, expressed / 2.39 / 3.9E-04
80 / hypothetical protein / 2.36 / 5.8E-05
81 / LOC_Os04g45720 / aldehyde dehydrogenase, putative, expressed / 2.36 / 6.0E-04
82 / LOC_Os02g42850 / MYB family transcription factor, putative, expressed / 2.35 / 5.4E-04
83 / LOC_Os02g48860 / aspartic proteinase nepenthesin-2 precursor, putative, expressed / 2.33 / 7.2E-03
84 / LOC_Os12g18550 / expressed protein / 2.33 / 4.0E-03
85 / LOC_Os01g11414 / sodium/calcium exchanger protein, putative, expressed / 2.31 / 1.9E-05
86 / LOC_Os03g50670 / retrotransposon protein, putative, Ty3-gypsy subclass / 2.31 / 3.9E-05
87 / LOC_Os04g53350 / expressed protein / 2.30 / 2.2E-03
88 / LOC_Os01g11414 / sodium/calcium exchanger protein, putative, expressed / 2.22 / 1.8E-04
89 / AB002266 / NBS-LRR disease resistance protein, putative, expressed / 2.19 / 1.5E-04
90 / retrotransposon protein, putative, unclassified / 2.19 / 4.6E-03
91 / LOC_Os03g24160 / phosphatidylinositol-4-phosphate 5-kinase, putative, expressed / 2.18 / 5.2E-04
92 / LOC_Os03g15460 / expressed protein / 2.18 / 6.7E-05
93 / LOC_Os02g05360 / expressed protein / 2.18 / 6.8E-04
94 / LOC_Os11g26950 / UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed / 2.18 / 8.4E-03
95 / AK062616 / hypothetical protein / 2.17 / 6.1E-04
96 / LOC_Os07g13490 / hypothetical protein / 2.16 / 5.6E-03
97 / LOC_Os01g53920 / receptor-like protein kinase 5 precursor, putative, expressed / 2.15 / 8.2E-03
98 / LOC_Os12g12580 / NADP-dependent oxidoreductase, putative, expressed / 2.14 / 7.5E-04
99 / LOC_Os02g48900 / aspartic proteinase nepenthesin-1 precursor, putative, expressed / 2.14 / 1.5E-04
100 / LOC_Os01g46370 / lipase class 3 family protein, putative, expressed / 2.14 / 6.5E-03
101 / LOC_Os12g16524 / glutaredoxin-C8 precursor, putative, expressed / 2.14 / 7.0E-03
102 / Myb, DNA-binding domain containing protein / 2.12 / 5.0E-05
103 / AK108533 / hypothetical protein / 2.12 / 3.8E-05
104 / LOC_Os07g13480 / hypothetical protein / 2.11 / 7.8E-03
105 / LOC_Os03g40540 / cytochrome P450, putative, expressed / 2.08 / 2.7E-03
106 / LOC_Os12g05310 / retrotransposon protein, putative, unclassified, expressed / 2.08 / 2.5E-05
107 / LOC_Os02g50990 / RING-H2 finger protein ATL1Q, putative, expressed / 2.08 / 9.5E-03
108 / zinc finger protein-related / 2.07 / 1.1E-03
109 / LOC_Os02g53200 / glucan endo-1,3-beta-glucosidase precursor, putative, expressed / 2.06 / 9.0E-04
110 / LOC_Os02g26800 / expressed protein / 2.06 / 2.1E-03
111 / LOC_Os12g16524 / glutaredoxin-C8 precursor, putative, expressed / 2.06 / 2.3E-03
112 / LOC_Os02g46940 / MYB family transcription factor, putative, expressed / 2.04 / 4.8E-03
113 / LOC_Os01g12100 / expressed protein / 2.02 / 3.5E-05
114 / AK120205 / hypothetical protein / 2.02 / 1.1E-04
115 / RAN3 | RAN3; GTP binding / 2.02 / 2.4E-05
116 / LOC_Os11g30790 / expressed protein / 2.01 / 2.7E-03
117 / LOC_Os11g32410 / expressed protein / 2.00 / 2.5E-04
118 / LOC_Os01g62610 / peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed / 2.00 / 3.6E-03
Down-regulated genes in leaf
S.No. / Locus ID / Annotation / Fold change / P-value1 / LOC_Os01g35330 / Circumsporozoite protein precursor / -119.16 / 5.0E-05
2 / LOC_Os12g20410 / Matrix attachment region binding protein / -93.70 / 1.2E-07
3 / LOC_Os01g35330 / Circumsporozoite protein precursor / -80.95 / 7.5E-05
4 / LOC_Os05g01330 / Hypothetical protein / -58.31 / 0.0E+00
5 / LOC_Os01g35789 / Hypothetical protein / -52.64 / 0.0E+00
6 / AK069517 / Auxin response factor / -46.29 / 1.3E-06
7 / LOC_Os02g47110 / ADP-ribosylation facto,Ras_like_GTPase / -40.70 / 2.7E-05
8 / Hypothetical protein / -38.05 / 3.1E-07
9 / AK106180 / Hypothetical protein / -37.94 / 5.5E-06
10 / Plant transposase (Ptta/En/Spm family) / -37.81 / 2.4E-06
11 / LOC_Os01g35789 / Hypothetical protein / -34.32 / 4.4E-06
12 / C2H2 zinc finger protein / -33.95 / 9.7E-07
13 / LOC_Os01g09370 / Ankyrin repeats / -32.47 / 2.5E-07
14 / LOC_Os02g46930 / C5HC2 zinc finger; JmjC domain / -29.96 / 1.0E-05
15 / Hypothetical protein / -29.94 / 6.0E-06
16 / AK100362 / Hypothetical protein / -24.59 / 4.6E-05
17 / AK065963 / Non-protein codingn transcript, putative npRNA / -23.52 / 6.6E-06
18 / LOC_Os02g54140 / Alpha-crystallin domain (ACD) / -21.62 / 4.2E-06
19 / LOC_Os01g35580 / Hypothetical protein / -19.37 / 4.3E-05
20 / LOC_Os02g51470 / ATP synthase delta (OSCP) subunit / -14.90 / 4.0E-08
21 / AK059464 / Retrotransposon protein / -14.81 / 1.7E-04
22 / LOC_Os01g35830 / Hypothetical protein / -14.22 / 2.5E-04
23 / Retrotransposon, centromere-specific / -13.73 / 2.3E-04
24 / LOC_Os01g34610 / SANTA (SANT Associated) / -13.57 / 1.1E-05
25 / LOC_Os12g20390 / Hypothetical protein / -13.17 / 2.8E-05
26 / AK059524 / Hypothetical protein / -12.30 / 3.2E-07
27 / LOC_Os02g51000 / p23_like domain of NUD (nuclear distribution) C / -12.01 / 2.8E-04
28 / LOC_Os02g46930 / C5HC2 zinc finger; JmjC domain / -11.70 / 7.6E-06
29 / LOC_Os01g09890 / The SUI1/eIF1 (eukaryotic initiation factor 1) / -11.36 / 2.0E-06
30 / LOC_Os01g66930 / Transposon protein, CACTA, En/Spm sub-class / -10.93 / 1.0E-06
31 / LOC_Os02g05440 / BIN4 (BRASSINOSTEROID-INSENSITIVE4) / -10.36 / 9.1E-05
32 / LOC_Os02g52280 / Development and cell death domain / -10.36 / 5.9E-04
33 / LOC_Os04g07890 / Chromosome segregation protein SMC / -9.87 / 5.4E-06
34 / LOC_Os02g51140 / Development and cell death domain / -9.68 / 1.9E-06
35 / AK064111 / Hypothetical protein / -9.35 / 6.2E-05
36 / Tetraspanin family protein / -8.97 / 1.7E-05
37 / AK059660 / Hypothetical protein / -8.94 / 1.4E-05
38 / AK069284 / Hypothetical protein / -8.94 / 1.2E-06
39 / LOC_Os02g48790 / AML1 / -8.93 / 1.1E-05
40 / Hypothetical protein / -8.83 / 6.5E-03
41 / LOC_Os02g54760 / Cyclic nucleotide-gated ion channel 14 / -8.79 / 8.4E-05
42 / AK110949 / Non-protein coding transcript / -8.72 / 1.7E-05
43 / LOC_Os11g29500 / Hypothetical protein / -8.66 / 2.8E-06
44 / HAT family dimerisation domain containing protein / -8.63 / 2.7E-06
45 / LOC_Os02g45690 / Uncharacterized mscS family protein / -8.01 / 9.9E-05
46 / LOC_Os04g53800 / Leucoanthocyanidin reductase / -7.63 / 2.0E-03
47 / LOC_Os01g11670 / OsSCP2 - Putative Serine Carboxypeptidase homologue / -7.42 / 1.0E-03
48 / LOC_Os04g05010 / CBS domain containing membrane protein / -7.30 / 9.3E-05
49 / LOC_Os01g34660 / RNAse P Rpr2/Rpp21 subunit domain containing protein / -6.93 / 2.5E-05
50 / LOC_Os02g54140 / hsp20/alpha crystallin family protein / -6.73 / 5.3E-05
51 / LOC_Os02g45690 / Uncharacterized mscS family protein / -6.39 / 3.9E-04
52 / LOC_Os02g49650 / Leaf senescence related protein / -6.10 / 7.2E-07
53 / AK064111 / Hypothetical protein / -6.09 / 4.6E-05
54 / LOC_Os02g45750 / Protein kinase domain containing protein / -5.96 / 3.4E-05
55 / LOC_Os02g49520 / Armadillo/beta-catenin repeat family protein / -5.92 / 1.1E-06
56 / LOC_Os02g46260 / OsSCP9 - Putative Serine Carboxypeptidase homologue / -5.92 / 1.8E-04
57 / LOC_Os04g47360 / OsPOP9 - Putative Prolyl Oligopeptidase homologue / -5.43 / 4.4E-03
58 / LOC_Os02g05199 / Hypothetical protein / -5.36 / 3.1E-05
59 / LOC_Os11g24610 / 60S ribosomal protein L38 / -5.19 / 7.5E-05
60 / LOC_Os02g46520 / Acetylornithine deacetylase / -5.12 / 7.8E-06
61 / LOC_Os01g08000 / Fibronectin type 3 and ankyrin repeat domains 1 protein / -5.11 / 9.3E-05
62 / Expressed protein / -5.10 / 1.2E-04
63 / AK120181 / STP4 (SUGAR TRANSPORTER 4) / -5.08 / 1.4E-04
64 / LOC_Os02g50710 / Expressed protein / -5.06 / 4.1E-04
65 / LOC_Os02g45690 / uncharacterized mscS family protein, putative, expressed / -4.92 / 2.2E-04
66 / AK070057 / conserved hypothetical protein / -4.84 / 4.6E-04
67 / LOC_Os04g34570 / transposon protein, putative, CACTA, En/Spm sub-class / -4.72 / 1.2E-06
68 / LOC_Os09g31430 / Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed / -4.68 / 4.2E-03
69 / LOC_Os11g01200.1 / senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed / -4.61 / 7.4E-07
70 / AK062668 / asparagine synthase family protein, expressed / -4.54 / 3.7E-04
71 / methyltransferase domain containing protein, putative, expressed / -4.46 / 2.2E-05
72 / AK068032 / hypothetical protein / -4.36 / 1.9E-04
73 / AK100385 / hypothetical protein / -4.15 / 1.7E-03
74 / LOC_Os01g36294 / cytochrome P450, putative, expressed / -4.14 / 9.9E-05
75 / AK063877 / Retrotransposon protein, putative, unclassified / -4.03 / 1.3E-03
76 / LOC_Os01g10504 / OsMADS3 - MADS-box family gene with MIKCc type-box, expressed / -3.94 / 3.5E-04
77 / LOC_Os02g53080 / hypothetical protein / -3.93 / 3.0E-04
78 / LOC_Os04g05080 / nucleobase-ascorbate transporter, putative, expressed / -3.84 / 3.2E-04
79 / AK060140 / DENN domain containing protein, expressed / -3.80 / 4.2E-06
80 / AK072494 / hypothetical protein / -3.68 / 4.8E-03
81 / LOC_Os03g42690 / transposon protein, putative, CACTA, En/Spm sub-class / -3.67 / 3.8E-06
82 / LOC_Os02g45490 / ATRPS13A (RIBOSOMAL PROTEIN S13A); structural constituent of ribosome / -3.61 / 3.0E-04
83 / LOC_Os01g36640 / disease resistance protein RPM1, putative, expressed / -3.43 / 3.7E-03
84 / LOC_Os02g51390 / Conserved hypothetical protein / -3.38 / 7.9E-03
85 / AK106401 / Protein prenyltransferase domain containing protein / -3.38 / 8.2E-06
86 / LOC_Os02g05980 / phytosulfokine receptor precursor, putative, expressed / -3.37 / 6.2E-04
87 / LOC_Os01g34610 / SANTA; SANTA (SANT Associated) / -3.31 / 4.5E-03
88 / LOC_Os12g22810 / transposon protein, putative, CACTA, En/Spm sub-class, expressed / -3.30 / 1.4E-03
89 / LOC_Os04g06850 / expressed protein / -3.28 / 4.0E-03
90 / LOC_Os02g55030 / hydrolase, NUDIX family, domain containing protein, expressed / -3.26 / 1.3E-03
91 / LOC_Os01g09370 / ankyrin repeat domain-containing protein 28, putative, expressed / -3.24 / 9.3E-04
92 / LOC_Os01g12680 / C4-dicarboxylate transporter/malic acid transport protein, expressed / -3.14 / 5.3E-06
93 / LOC_Os08g02110 / peroxidase precursor, putative, expressed / -3.07 / 5.1E-05
94 / LOC_Os02g50230 / peptidase, putative, expressed / -3.01 / 5.7E-05
95 / AK109297 / heat shock protein DnaJ, putative, expressed / -2.99 / 2.5E-04
96 / LOC_Os02g43790 / ethylene-responsive transcription factor, putative, expressed / -2.96 / 6.6E-03
97 / LOC_Os02g50340 / membrane attack complex component/perforin/complement C9, putative, expressed / -2.93 / 6.3E-03
98 / LOC_Os02g51450 / mTERF family protein, expressed / -2.93 / 3.8E-05
99 / LOC_Os02g54760 / cyclic nucleotide-gated ion channel 14, putative, expressed / -2.84 / 4.0E-03
100 / LOC_Os12g14110 / hypothetical protein / -2.81 / 4.7E-04
101 / LOC_Os02g52290 / peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed Locus Name:LOC_Os02g52290.1 / -2.79 / 3.1E-05
102 / LOC_Os04g07280 / AGAP002737-PA, putative, expressed / -2.77 / 2.4E-03
103 / LOC_Os02g54000 / mRNA cap guanine-N7 methyltransferase 2, putative, expressed / -2.77 / 7.2E-04
104 / LOC_Os12g22870.1 / hypothetical protein / -2.76 / 7.7E-05
105 / LOC_Os02g53040 / tetratricopeptide-like helical, putative, expressed / -2.75 / 3.5E-03
106 / LOC_Os04g54070 / receptor-like kinase, putative / -2.74 / 1.3E-05
107 / LOC_Os03g41438 / serpin domain containing protein, putative, expressed / -2.72 / 9.3E-03
108 / LOC_Os07g33300 / Hypothetical protein / -2.69 / 7.5E-03
109 / LOC_Os02g48660 / 60S ribosomal protein L23 (RPL23B) / -2.67 / 2.7E-04
110 / AK059660 / hypothetical protein / -2.65 / 1.9E-03
111 / LOC_Os02g54760.1 / cyclic nucleotide-gated ion channel 14, putative, expressed / -2.63 / 7.8E-04
112 / LOC_Os02g50700 / Conserved hypothetical protein / -2.61 / 1.6E-03
113 / LOC_Os11g22350 / white-brown complex homolog protein, putative, expressed, Putative ABC transporter / -2.60 / 1.9E-05
114 / LOC_Os02g05199 / hypothetical protein / -2.59 / 9.8E-03
115 / LOC_Os11g28740.1 / hAT dimerisation domain-containing protein, putative / -2.57 / 3.2E-05
116 / LOC_Os02g54080 / expressed protein / -2.54 / 9.8E-03
117 / LOC_Os01g45390.1 / HD domain containing protein 2, putative, expressed / -2.53 / 7.0E-04
118 / LOC_Os02g46460 / peptide transporter PTR2, putative, expressed / -2.53 / 8.7E-04
119 / LOC_Os02g53780 / expressed protein / -2.51 / 5.6E-05
120 / LOC_Os10g30970.1 / expressed protein / -2.49 / 5.3E-04
121 / LOC_Os06g37150 / L-ascorbate oxidase precursor, putative, expressed / -2.47 / 4.3E-03
122 / LOC_Os02g51840 / expressed protein / -2.47 / 3.2E-03
123 / AK107943 / hypothetical protein / -2.45 / 2.4E-03
124 / LOC_Os02g08270 / class I glutamine amidotransferase, putative, expressed / -2.45 / 1.1E-03
125 / LOC_Os10g02360 / OsWAK98 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed / -2.41 / 8.6E-03
126 / LOC_Os03g01880 / possible lysine decarboxylase domain containing protein, expressed / -2.41 / 7.9E-04
127 / ketol-acid reductoisomerase / -2.39 / 6.4E-04
128 / LOC_Os04g31790 / expressed protein / -2.37 / 2.2E-03
129 / LOC_Os02g53150 / expressed protein / -2.37 / 3.1E-05
130 / LOC_Os01g09420 / expressed protein / -2.35 / 1.3E-04
131 / LOC_Os06g29730 / RALFL28 - Rapid ALkalinization Factor RALF family protein precursor, expressed / -2.35 / 2.5E-04
132 / LOC_Os10g04270 / jacalin-like lectin domain containing protein, expressed / -2.35 / 4.0E-04
133 / LOC_Os12g16240 / nmrA-like family domain containing protein / -2.34 / 5.0E-06
134 / LOC_Os01g11650 / GDSL-like lipase/acylhydrolase, putative, expressed / -2.29 / 1.9E-03
135 / LOC_Os02g48820 / plastocyanin-like domain containing protein, putative, expressed / -2.28 / 1.8E-03
136 / LOC_Os02g45974 / expressed protein / -2.28 / 7.8E-06
137 / LOC_Os09g36680 / ribonuclease T2 family domain containing protein, expressed / -2.26 / 3.1E-04
138 / LOC_Os04g03980 / flavin monooxygenase, putative, expressed / -2.24 / 1.8E-04
139 / LOC_Os11g44810 / auxin-repressed protein, putative, expressed / -2.23 / 3.8E-03
140 / LOC_Os11g30200 / expressed protein / -2.22 / 7.9E-03
141 / LOC_Os02g51100 / arsenical pump-driving ATPase, putative, expressed / -2.22 / 7.9E-06
142 / LOC_Os01g58020 / ribulose bisphosphate carboxylase large chain precursor, putative / -2.22 / 5.0E-04
143 / LOC_Os02g47210 / amino acid permease family protein, putative, expressed / -2.22 / 2.3E-03
144 / LOC_Os03g03724 / expressed protein / -2.21 / 4.9E-04
145 / LOC_Os02g54980 / pheophorbide a oxygenase, chloroplast precursor, putative, expressed / -2.19 / 8.0E-04
146 / vacuolar ATPase G subunit, putative, expressed / -2.19 / 9.8E-05
147 / LOC_Os04g03796 / OsSub37 - Putative Subtilisin homologue, expressed / -2.18 / 1.1E-05
148 / LOC_Os06g37150 / L-ascorbate oxidase precursor, putative, expressed / -2.17 / 7.6E-05
149 / LOC_Os12g24240 / expressed protein / -2.16 / 1.2E-05
150 / LOC_Os12g43140 / late embryogenesis abundant protein D-34, putative, expressed / -2.16 / 5.6E-05
151 / LOC_Os02g54240 / OsFBX62 - F-box domain containing protein / -2.15 / 4.7E-04
152 / LOC_Os12g24084 / expressed protein / -2.15 / 6.7E-04
153 / LOC_Os12g18374 / NB-ARC domain containing protein, expressed / -2.15 / 2.8E-05
154 / LOC_Os02g53180 / 1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed / -2.14 / 7.6E-05
155 / LOC_Os02g54200 / mitochondrial transcription termination factor family protein, putative, expressed / -2.13 / 4.7E-03
156 / LOC_Os04g02620 / oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed / -2.12 / 2.6E-05
157 / LOC_Os11g26130 / receptor protein kinase TMK1 precursor, putative, expressed / -2.11 / 6.9E-03
158 / LOC_Os04g15920 / dehydrogenase, putative, expressed / -2.10 / 1.0E-03
159 / LOC_Os01g34660 / RNAse P Rpr2/Rpp21 subunit domain containing protein, expressed / -2.09 / 9.3E-03
160 / AK071691 / expressed protein / -2.09 / 3.2E-03
161 / LOC_Os02g51890 / RNA recognition motif containing protein, putative, expressed / -2.08 / 5.6E-03
162 / LOC_Os01g58910 / auxin-induced protein 5NG4, putative, expressed / -2.07 / 8.6E-04
163 / LOC_Os01g11590 / uncharacterized protein HI0077, putative, expressed / -2.07 / 1.4E-04
164 / LOC_Os02g51570 / peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed / -2.07 / 1.5E-03
165 / AK063877 / hypothetical protein / -2.07 / 1.5E-03
166 / LOC_Os02g49510 / amino acid transporter, putative, expressed / -2.06 / 9.3E-06
167 / LOC_Os08g19420 / O-methyltransferase, putative, expressed / -2.05 / 4.9E-04
168 / expressed protein / -2.04 / 7.6E-04
169 / LOC_Os04g53502 / NBS-LRR disease resistance protein, putative / -2.04 / 1.9E-03
170 / AK107893 / expressed protein / -2.04 / 5.8E-03
171 / LOC_Os04g03740 / expressed protein / -2.04 / 1.2E-03
172 / LOC_Os04g07830 / conserved hypothetical protein / -2.04 / 6.9E-03
173 / LOC_Os08g24480 / HAT family dimerisation domain containing protein, identical, putative / -2.04 / 7.2E-03
174 / LOC_Os11g07200 / receptor protein kinase CLAVATA1 precursor, putative, expressed / -2.03 / 2.0E-03
175 / LOC_Os09g32100 / expressed protein / -2.02 / 9.2E-03
176 / LOC_Os02g52900 / glutaredoxin 2, putative, expressed / -2.01 / 5.4E-04
177 / AK061161 / expressed protein / -2.01 / 7.8E-05
178 / LOC_Os02g46610 / zinc-binding protein, putative, expressed / -2.01 / 3.7E-03
179 / LOC_Os12g21940 / expressed protein / -2.00 / 4.1E-04
Down-regulated genes in panicle
S.No. / Locus ID / Annotation / Fold change / P-value1 / LOC_Os10g40530 / Protease inhibitor/seed storage/LTP family protein precursor/ alpha-amylase inhibitors / -62.24 / 6.3E-07
2 / LOC_Os10g40430 / Protease inhibitor/seed storage/LTP family protein precursor/ alpha-amylase inhibitors / -33.95 / 3.0E-05
3 / LOC_Os07g35520 / glucan endo-1,3-beta-glucosidase precursor / -4.98 / 3.9E-05
4 / LOC_Os07g07920 / Protease inhibitor/seed storage/LTP family protein precursor/ alpha-amylase inhibitors / -4.35 / 2.2E-03
5 / LOC_Os01g73250 / Putative abscisic stress-ripening, Bundle sheath cell specific protein / -4.19 / 2.3E-03
6 / LOC_Os03g04250 / Glutathione S-transferase / -3.96 / 3.0E-05
7 / LOC_Os04g54010 / Serine/threonine-protein kinase receptor precursor, D-mannose binding lectin / -3.20 / 6.9E-03
8 / LOC_Os04g27430 / Terpene synthase / -2.66 / 3.3E-04
9 / LOC_Os04g46130 / Plastocyanin-like domain containing protein / -2.37 / 4.6E-04