Table 1 Primers Sequence (5 to 3 ) Used for Real-Time Quantitative PCR
Table S3. Genes differentially expressed in P.fluorescens Pf0-1 during inter-specific interaction with Pedobacter sp. V48
SEQ_ID / Gene Description / Fold changeup-regulated genes
Pfl_0089 / hypothetical protein / 2.43
Pfl_0117 / Acyl-CoA dehydrogenase-like / 6.51
Pfl_0118 / L-carnitine dehydratase/bile acid-inducible protein F / 7.01
Pfl_0217 / hypothetical protein / 3.86
Pfl_0277 / Thioesterase s erfamily / 3.01
Pfl_0279 / Oxidoreductase alpha (molybdopterin) subunit / 2.78
Pfl_0349 / Glycogen/starch/alpha-glucan phosphorylase / 2.52
Pfl_0360 / urocanate hydratase / 6.33
Pfl_0545 / hypothetical protein / 3.30
Pfl_0550 / Aldehyde dehydrogenase / 2.18
Pfl_0552 / Extracellular ligand-binding receptor / 3.12
Pfl_0553 / inner-membrane translocator / 3.92
Pfl_0650 / Flp/Fap pilin component / 2.44
Pfl_0651 / Response regulator receiver domain protein (CheY) / 3.29
Pfl_0657 / chemotaxis sensory transducer, Cache sensor / 3.37
Pfl_0686 / Methylmalonate-semialdehyde dehydrogenase / 3.80
Pfl_0739 / hypothetical protein / 2.82
Pfl_0773 / Dihydropteroate synthase / 5.87
Pfl_0774 / Phosphoglucosamine mutase / 6.94
Pfl_0872 / histidinol-phosphate aminotransferase / 3.79
Pfl_0903 / Short-chain dehydrogenase/reductase SDR / 2.88
Pfl_0907 / ATP-dependent transcriptional regulator, MalT related, LuxR family / 2.35
Pfl_0910 / homogentisate 1,2-dioxygenase / 3.28
Pfl_0911 / Fumarylacetoacetase / 3.74
Pfl_0912 / Maleylacetoacetate isomerase / 3.01
Pfl_0963 / PhoH-like protein / 4.09
Pfl_0973 / extracellular solute-binding protein, family 3 / 2.22
Pfl_0976 / ABC transporter-like / 2.54
Pfl_1243 / hypothetical protein / 2.89
Pfl_1308 / hypothetical protein / 4.11
Pfl_1404 / General substrate transporter / 22.94
Pfl_1406 / Allophanate hydrolase subunit 1 / 4.19
Pfl_1454 / Na+/solute symporter / 3.06
Pfl_1455 / Permease for cytosine/purines, uracil, thiamine, allantoin / 6.34
Pfl_1456 / hypothetical protein / 7.55
Pfl_1457 / Putative agmatinase / 6.53
Pfl_1497 / aromatic amino acid aminotransferase / 5.51
Pfl_1498 / pterin-4-alpha-carbinolamine dehydratase / 9.44
Pfl_1499 / phenylalanine 4-monooxygenase / 30.60
Pfl_1501 / flagellar basal body rod protein FlgF / 2.32
Pfl_1502 / flagellar basal body rod protein FlgG / 3.43
Pfl_1503 / flagellar basal body L-ring protein / 4.74
Pfl_1505 / peptidoglycan hydrolase / 8.85
Pfl_1507 / flagellar hook-associated protein FlgL / 4.08
Pfl_1511 / NAD-dependent epimerase/dehydratase / 2.67
Pfl_1512 / dTDP-4-dehydrorhamnose 3,5-epimerase / 3.11
Pfl_1513 / hypothetical protein / 5.20
Pfl_1516 / Cephalosporin hydroxylase / 3.01
Pfl_1527 / flagellin / 2.35
Pfl_1529 / Flagellar hook-associated 2-like / 2.64
Pfl_1534 / Two Component, Sigma-54 Specific, Transcriptional Regulator, Fis family / 2.40
Pfl_1537 / flagellar motor switch protein G / 3.19
Pfl_1547 / flagellar motor switch protein / 3.52
Pfl_1548 / Flagellar biosynthesis protein, FliO / 3.31
Pfl_1554 / hypothetical protein / 2.10
Pfl_1562 / Cobyrinic acid a,c-diamide synthase / 4.21
Pfl_1563 / flagellar biosynthesis sigma factor / 3.27
Pfl_1567 / chemotaxis-specific methylesterase / 2.65
Pfl_1571 / CheW protein / 3.01
Pfl_1572 / CheW protein / 5.85
Pfl_1573 / hypothetical protein / 5.45
Pfl_1583 / Periplasmic protein thiol:disulfide oxidoreductase DsbE / 2.90
Pfl_1596 / 2-hydroxy-3-oxopropionate reductase / 2.76
Pfl_1597 / Hydroxypyruvate isomerase / 3.29
Pfl_1615 / dihydrolipoamide acetyltransferase / 4.21
Pfl_1616 / dihydrolipoamide dehydrogenase / 2.24
Pfl_1640 / hypothetical protein / 3.74
Pfl_1702 / Protein of unknown function DUF989 / 3.74
Pfl_1703 / ureidoglycolate hydrolase / 4.06
Pfl_1704 / allantoicase / 3.01
Pfl_1705 / hypothetical protein / 2.52
Pfl_1706 / Polysaccharide deacetylase / 2.80
Pfl_1764 / 2-methylisocitrate lyase / 5.56
Pfl_1765 / methylcitrate synthase / 14.40
Pfl_1766 / aconitate hydratase / 26.88
Pfl_1767 / methylitaconate delta2-delta3-isomerase / 14.74
Pfl_1795 / Molybdenum cofactor sulfurylase / 3.37
Pfl_1904 / oxidoreductase / 4.47
Pfl_1918 / hypothetical protein / 2.69
Pfl_2074 / acetyl-CoA acetyltransferase / 4.35
Pfl_2075 / 3-oxoacid CoA-transferase / 16.23
Pfl_2076 / 3-oxoacid CoA-transferase / 13.69
Pfl_2145 / Molybdopterin biosynthesis MoaE / 3.38
Pfl_2146 / ThiamineS / 2.49
Pfl_2201 / haem catalase/peroxidase / 3.87
Pfl_2321 / ring hydroxylating dioxygenase, alpha subunit / 2.99
Pfl_2322 / 2-chlorobenzoate 1,2-dioxygenase / 4.32
Pfl_2323 / benzoate 1,2-dioxygenase ferredoxin reductase subunit / 3.94
Pfl_2324 / 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase / 5.83
Pfl_2325 / Mandelate racemase/muconate lactonizing enzyme / 6.11
Pfl_2326 / Muconolactone delta-isomerase / 7.77
Pfl_2416 / hypothetical protein / 4.73
Pfl_2530 / 4Fe-4S ferredoxin, iron-sulfur binding / 15.09
Pfl_2591 / hypothetical protein / 2.21
Pfl_2601 / chemotaxis sensory transducer / 2.99
Pfl_2629 / hypothetical protein / 2.72
Pfl_2866 / Enoyl-CoA hydratase/isomerase / 6.24
Pfl_2867 / Acyl-CoA dehydrogenase-like / 6.29
Pfl_2868 / Thiolase / 5.67
Pfl_2870 / AMP-dependent synthetase and ligase / 2.71
Pfl_2878 / Protein of unknown function DUF1348 / 6.10
Pfl_2906 / hypothetical protein / 3.64
Pfl_2907 / chemotaxis sensory transducer / 3.46
Pfl_2917 / 4-hydroxyphenylpyruvate dioxygenase / 4.15
Pfl_2924 / Pyridine nucleotide-disulphide oxidoreductase, class-II, active site / 4.49
Pfl_2962 / Muconolactone delta-isomerase / 2.71
Pfl_2964 / hypothetical protein / 7.61
Pfl_2965 / 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase / 7.51
Pfl_2966 / benzoate 1,2-dioxygenase ferredoxin reductase subunit / 5.18
Pfl_2967 / Aromatic-ring-hydroxylating dioxygenase, beta subunit / 3.32
Pfl_2968 / ring hydroxylating dioxygenase, alpha subunit / 2.76
Pfl_2972 / quinohemoprotein amine dehydrogenase, subunit beta / 3.96
Pfl_2973 / hypothetical protein / 4.00
Pfl_3206 / NAD-glutamate dehydrogenase / 3.73
Pfl_3262 / Flavin reductase-like, FMN-binding / 3.14
Pfl_3358 / Glucose-methanol-choline oxidoreductase / 11.68
Pfl_3385 / Cytochrome bd ubiquinol oxidase, subunit II / 24.56
Pfl_3386 / Cytochrome bd ubiquinol oxidase, subunit I / 19.27
Pfl_3387 / Oxidoreductase alpha (molybdopterin) subunit / 6.78
Pfl_3441 / dihydropyrimidinase / 3.39
Pfl_3442 / putative oxidoreductase / 2.88
Pfl_3443 / Branched-chain alpha-keto acid dehydrogenase E1 component / 5.01
Pfl_3463 / Branched-chain alpha-keto acid dehydrogenase E1 component / 9.13
Pfl_3464 / Transketolase-like / 24.67
Pfl_3465 / Branched-chain alpha-keto acid dehydrogenase subunit E2 / 16.98
Pfl_3466 / dihydrolipoamide dehydrogenase / 11.42
Pfl_3607 / NADH dehydrogenase I subunit F / 4.86
Pfl_3651 / Acyl-CoA dehydrogenase-like / 3.23
Pfl_3653 / Transcriptional Regulator, MerR family / 4.97
Pfl_3654 / hydroxymethylglutaryl-CoA lyase / 5.20
Pfl_3655 / acyl-CoA synthetase / 10.74
Pfl_3656 / Isovaleryl-CoA dehydrogenase / 11.12
Pfl_3657 / Propionyl-CoA carboxylase / 6.52
Pfl_3658 / gamma-carboxygeranoyl-CoA hydratase / 14.38
Pfl_3659 / Carbamoyl-phosphate synthase L chain, ATP-binding / 20.11
Pfl_3714 / hypothetical protein / 2.83
Pfl_3768 / chemotaxis sensory transducer / 3.99
Pfl_3890 / aconitate hydratase / 6.35
Pfl_4046 / DegT/DnrJ/EryC1/StrS aminotransferase / 2.46
Pfl_4076 / Chorismate mutase / 2.50
Pfl_4095 / hypothetical protein / 3.26
Pfl_4096 / Acetyl-CoA C-acyltransferase / 2.81
Pfl_4146 / lipoprotein, putative / 2.23
Pfl_4195 / Zinc-containing alcohol dehydrogenase s erfamily / 3.28
Pfl_4216 / nucleoside triphosphate pyrophosphohydrolase / 2.81
Pfl_4236 / C4-dicarboxylate transporter DctA / 2.13
Pfl_4248 / flagellar hook protein FlgE / 4.47
Pfl_4249 / flagellar basal body rod modification protein / 3.33
Pfl_4250 / flagellar basal body rod protein FlgC / 2.45
Pfl_4254 / flagellar basal body P-ring biosynthesis protein FlgA / 3.28
Pfl_4288 / ABC transporter-like / 3.35
Pfl_4308 / chemotaxis sensory transducer, Pas/Pac sensor / 3.16
Pfl_4354 / acyl-CoA synthetase / 3.24
Pfl_4431 / chemotaxis sensory transducer, Cache sensor / 3.89
Pfl_4459 / Citrate-proton symport / 2.77
Pfl_4525 / Molybdopterin oxidoreductase / 5.53
Pfl_4532 / glycerol kinase / 3.59
Pfl_4542 / hypothetical protein / 3.95
Pfl_4624 / hypothetical protein / 2.68
Pfl_4625 / Histidine Kinase / 3.32
Pfl_4645 / Cytochrome C oxidase subunit IV / 3.61
Pfl_4646 / cytochrome o ubiquinol oxidase, subunit III / 3.30
Pfl_4732 / FAD dependent oxidoreductase / 2.38
Pfl_4733 / hypothetical protein / 2.93
Pfl_4745 / glutamate racemase / 2.92
Pfl_4794 / Pentapeptide repeat / 3.10
Pfl_4850 / Peptidylprolyl isomerase, FKBP-type / 2.22
Pfl_5052 / Bacterioferritin / 2.57
Pfl_5053 / Catalase-like / 3.30
Pfl_5059 / preprotein translocase subunit SecY / 2.21
Pfl_5066 / 30S ribosomal protein S14 / 2.72
Pfl_5067 / 50S ribosomal protein L5 / 2.56
Pfl_5068 / 50S ribosomal protein L24 / 3.98
Pfl_5069 / 50S ribosomal protein L14 / 3.43
Pfl_5070 / 30S ribosomal protein S17 / 4.78
Pfl_5071 / 50S ribosomal protein L29 / 4.51
Pfl_5072 / 50S ribosomal protein L16 / 3.82
Pfl_5073 / 30S ribosomal protein S3 / 3.33
Pfl_5074 / 50S ribosomal protein L22 / 3.68
Pfl_5167 / Acyl-CoA dehydrogenase-like / 6.75
Pfl_5171 / hypothetical protein / 3.58
Pfl_5206 / Sarcosine oxidase, delta subunit, heterotetrameric / 3.74
Pfl_5207 / Sarcosine oxidase, beta subunit, heterotetrameric / 2.46
Pfl_5236 / Transcriptional Regulator, AraC family / 5.27
Pfl_5279 / Thioesterase s erfamily / 2.43
Pfl_5295 / Malonate transporter MadL subunit / 3.29
Pfl_5296 / acyl-carrier-protein S-malonyltransferase / 2.59
Pfl_5297 / phosphoribosyl-dephospho-CoA transferase / 6.02
Pfl_5298 / Malonate decarboxylase gamma subunit / 5.38
Pfl_5299 / malonate decarboxylase subunit beta / 3.82
Pfl_5302 / Malonate decarboxylase, alpha subunit / 3.66
Pfl_5371 / Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase / 3.40
Pfl_5444 / flagellar basal body-associated protein FliL-like protein / 2.62
Pfl_5452 / ChaC-like protein / 3.03
Pfl_5525 / Endoribonuclease L-PSP / 4.77
Pfl_5526 / D-amino acid dehydrogenase small subunit / 3.30
Pfl_5612 / Phosphate transport system permease protein 1 / 8.15
Pfl_5723 / Tn7-like transposition protein C / 3.08
down-regulated genes
Pfl_0010 / glycyl-tRNA synthetase subunit alpha / 2.57
Pfl_0043 / hypothetical protein / -20.7
Pfl_0044 / Protein of unknown function DUF1328 / -20.8
Pfl_0045 / hypothetical protein / -9.27
Pfl_0054 / cytochrome c-type protein / -2.33
Pfl_0064 / hydroperoxidase II / -4.75
Pfl_0101 / Protein of unknown function DUF883 / -3.51
Pfl_0113 / NAD/NADP transhydrogenase, membrane-spanning dIIa subunit / -3.39
Pfl_0119 / hypothetical protein / -4.64
Pfl_0191 / Fatty acid desaturase / -2.41
Pfl_0193 / hypothetical protein / -36.1
Pfl_0194 / Thiosulphate-binding protein / -45.5
Pfl_0207 / hypothetical protein / -5.81
Pfl_0221 / Protein of unknown function DUF1234 / -6.30
Pfl_0222 / Response regulator receiver domain protein (CheY) / -3.41
Pfl_0223 / NLPA lipoprotein / -31.6
Pfl_0255 / taurine transporter ATP-binding subunit / -4.54
Pfl_0256 / Taurine ABC transporter, periplasmic binding protein / -15.57
Pfl_0295 / outer membrane porin / -4.76
Pfl_0323 / imidazoleglycerol-phosphate dehydratase / -3.13
Pfl_0334 / Rhodanese-like / -4.03
Pfl_0335 / Glutaredoxin, GrxC / -4.98
Pfl_0336 / preprotein translocase subunit SecB / -4.87
Pfl_0344 / Glutamine synthetase type I / -3.69
Pfl_0346 / thiamine biosynthesis protein ThiI / -4.09
Pfl_0348 / hypothetical protein / -9.51
Pfl_0352 / fructose-1,6-bisphosphatase / -3.24
Pfl_0354 / chemotaxis sensory transducer, Cache sensor / -3.06
Pfl_0373 / glucan biosynthesis protein G / -2.52
Pfl_0375 / extracellular solute-binding protein, family 3 / -3.01
Pfl_0401 / 50S ribosomal protein L31 / -2.70
Pfl_0463 / pyruvate dehydrogenase subunit E1 / -4.17
Pfl_0540 / hypothetical protein / 4.04
Pfl_0613 / bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase / -2.94
Pfl_0614 / DNA-binding protein Fis / -3.47
Pfl_0627 / arginine decarboxylase / -2.53
Pfl_0687 / hypothetical protein / -4.68
Pfl_0718 / NAD(P)H dehydrogenase (quinone) / -3.40
Pfl_0748 / hypothetical protein / -4.74
Pfl_0756 / Sodium:neurotransmitter symporter / -4.85
Pfl_0775 / triosephosphate isomerase / -2.35
Pfl_0776 / preprotein translocase subunit SecG / -2.45
Pfl_0777 / hypothetical protein / -3.32
Pfl_0778 / transcription elongation factor NusA / -3.29
Pfl_0801 / Ornithine decarboxylase / -2.30
Pfl_0877 / sulfate adenylyltransferase subunit 2 / -15.6
Pfl_0882 / Peptidylprolyl isomerase, FKBP-type / -2.80
Pfl_0887 / Thioredoxin reductase / -2.44
Pfl_0989 / leucyl aminopeptidase / -2.98
Pfl_0992 / GTP-binding protein LepA / -2.25
Pfl_1019 / 30S ribosomal protein S16 / -5.81
Pfl_1020 / 16S rRNA-processing protein / -5.40
Pfl_1021 / tRNA (guanine-N(1)-)-methyltransferase / -4.17
Pfl_1067 / hypothetical protein / -3.88
Pfl_1070 / adenylate kinase / -4.53
Pfl_1119 / CTP synthetase / -2.60
Pfl_1121 / phosphopyruvate hydratase / -3.17
Pfl_1125 / Zinc-containing alcohol dehydrogenase superfamily / -2.58
Pfl_1126 / Putative esterase / -3.73
Pfl_1133 / 4Fe-4S ferredoxin, iron-sulfur binding / -5.67
Pfl_1191 / hypothetical protein / -7.17
Pfl_1197 / prolyl-tRNA synthetase / -2.30
Pfl_1228 / OmpA/MotB / -5.49
Pfl_1230 / hypothetical protein / -3.07
Pfl_1253 / hypothetical protein / -3.45
Pfl_1283 / General substrate transporter / -4.94
Pfl_1284 / Transcriptional Regulator, ArsR family / -2.93
Pfl_1324 / hypothetical protein / -5.12
Pfl_1363 / Anti Sigma-E protein, RseA / -3.92
Pfl_1364 / Sigma-E regulatory protein, MucB/RseB / -3.26
Pfl_1371 / dihydrodipicolinate synthase / -2.87
Pfl_1394 / hypothetical protein / -2.90
Pfl_1414 / Aspartyl/Asparaginyl beta-hydroxylase / -3.11
Pfl_1591 / Thiosulphate-binding protein / -5.46
Pfl_1607 / Protein of unknown function DUF485 / -2.41
Pfl_1610 / Succinate dehydrogenase, cytochrome b subunit / -3.42
Pfl_1611 / succinate dehydrogenase, hydrophobic membrane anchor protein / -2.95
Pfl_1620 / Protein of unknown function DUF599 / -17.7
Pfl_1621 / hypothetical protein / -5.80
Pfl_1622 / lipoprotein, putative / -4.60
Pfl_1633 / phosphoribosylaminoimidazole synthetase / -3.76
Pfl_1641 / cob(I)yrinic acid a,c-diamide adenosyltransferase / -3.41
Pfl_1655 / Membrane protein involved in aromatic hydrocarbon degradation / -3.84
Pfl_1671 / Peptidylprolyl isomerase, FKBP-type / -4.88
Pfl_1693 / cell division topological specificity factor MinE / -2.89
Pfl_1694 / Septum site-determining protein MinD / -3.24
Pfl_1727 / hypothetical protein / -11.56
Pfl_1747 / Rickettsia 17 kDa surface antigen / -3.46
Pfl_1748 / Rickettsia 17 kDa surface antigen / -3.05
Pfl_1809 / Acyl-CoA dehydrogenase-like / -2.67
Pfl_1894 / aspartate-semialdehyde dehydrogenase / -3.76
Pfl_1930 / hypothetical protein / -2.15
Pfl_1981 / Response regulator receiver domain protein (CheY) / -2.87
Pfl_2099 / hypothetical protein / -3.98
Pfl_2102 / malate:quinone oxidoreductase / -2.43
Pfl_2183 / Lytic transglycosylase, catalytic / -3.35
Pfl_2191 / hypothetical protein / -3.27
Pfl_2205 / ABC transporter, periplasmic substrate-binding protein / -3.49
Pfl_2292 / hypothetical protein / -2.48
Pfl_2346 / Transcriptional Regulator, XRE family with Cupin sensor domain / -4.84
Pfl_2356 / Na+/malate symporter / -4.14
Pfl_2404 / Hemerythrin HHE cation binding region / -9.58
Pfl_2405 / hypothetical protein / -4.10
Pfl_2545 / hypothetical protein / -2.65
Pfl_2549 / glycogen synthase / -4.27
Pfl_2621 / hypothetical protein / -6.38
Pfl_2622 / hypothetical protein / -3.52
Pfl_2653 / Possible circadian clock protein KaiC / -4.86
Pfl_2688 / Protein of unknown function DUF903 / -4.69
Pfl_2775 / Transcriptional Regulator, LysR family / -2.34
Pfl_2780 / Substrate-binding region of ABC-type glycine betaine transport system / -3.06
Pfl_2788 / Manganese containing catalase / -2.44
Pfl_2791 / hypothetical protein / -2.52
Pfl_2801 / Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine / -5.15
Pfl_2802 / extracellular solute-binding protein, family 3 / -9.37
Pfl_2929 / UTP--glucose-1-phosphate uridylyltransferase / -3.05
Pfl_3100 / Cobalt transporter subunit CbtB, putative / -2.78
Pfl_3101 / Cobalt transporter subunit CbtA, putative / -3.16
Pfl_3112 / Nitrite and sulphite reductase 4Fe-4S region / -5.84
Pfl_3113 / hypothetical protein / -5.14
Pfl_3115 / Phosphoglycerate/bisphosphoglycerate mutase / -5.30
Pfl_3116 / Sterol-binding / -2.44
Pfl_3132 / hypothetical protein / -3.08
Pfl_3377 / hypothetical protein / -3.87
Pfl_3396 / Aromatic amino acid permease / -4.73
Pfl_3517 / hypothetical protein / -16.5
Pfl_3570 / Hemerythrin HHE cation binding region / -2.89
Pfl_3594 / Isocitrate dehydrogenase (NADP+) / -6.47
Pfl_3598 / adenylosuccinate lyase / -5.33
Pfl_3599 / Transcription factor jumonji, jmjC / -2.27
Pfl_3603 / NADH dehydrogenase subunit A / -2.79
Pfl_3644 / RND efflux system, outer membrane lipoprotein, NodT / -3.70
Pfl_3687 / NADH:flavin oxidoreductase/NADH oxidase / -2.52
Pfl_3694 / Histone-like DNA-binding protein / -2.19
Pfl_3697 / ATP-dependent Clp protease proteolytic subunit / -2.32
Pfl_3698 / trigger factor / -2.60
Pfl_3766 / Protein of unknown function DUF606 / -2.04
Pfl_3862 / soluble pyridine nucleotide transhydrogenase / -3.46
Pfl_3865 / glyceraldehyde-3-phosphate dehydrogenase / -4.22
Pfl_3871 / Transcriptional Regulator, TetR family / -6.02
Pfl_3879 / multifunctional fatty acid oxidation complex subunit alpha / -4.37
Pfl_3955 / hypothetical protein / -2.19
Pfl_3958 / lipid kinase / -2.38
Pfl_3968 / Rh-like protein/ammonium transporter / -6.79
Pfl_3970 / hypothetical protein / -3.67
Pfl_3983 / aminotransferase AlaT / -2.35
Pfl_4009 / phospho-2-dehydro-3-heoxyheptonate aldolase / -2.61
Pfl_4048 / ABC transporter-like / -2.39
Pfl_4058 / dTDP-glucose 4,6-dehydratase / -2.73
Pfl_4062 / DegT/DnrJ/EryC1/StrS aminotransferase / -3.89
Pfl_4072 / 30S ribosomal protein S1 / -2.86
Pfl_4107 / hypothetical protein / -5.39
Pfl_4118 / Electron transfer flavoprotein-ubiquinone oxidoreductase / -7.70
Pfl_4132 / hypothetical protein / -2.17
Pfl_4133 / hypothetical protein / -4.03
Pfl_4156 / acyl carrier protein / -2.89
Pfl_4160 / 50S ribosomal protein L32 / -2.78
Pfl_4177 / MotA/TolQ/ExbB proton channel / -2.87
Pfl_4212 / 3-hydroxydecanoyl-(acyl carrier protein) dehydratase / -2.30
Pfl_4232 / hypothetical protein / -2.22
Pfl_4267 / hypothetical protein / -3.66
Pfl_4268 / hypothetical protein / -8.86
Pfl_4292 / Lysine-arginine-ornithine-binding periplasmic protein / -2.24
Pfl_4351 / CsbD-like / -5.51
Pfl_4353 / acyl-CoA synthetase / -4.18
Pfl_4357 / hypothetical protein / -11.3
Pfl_4366 / Carbohydrate-selective porin OprB / -2.54
Pfl_4369 / Binding-protein-dependent transport systems inner membrane component / -3.85
Pfl_4370 / extracellular solute-binding protein, family 1 / -6.58
Pfl_4375 / phosphogluconate dehydratase / -3.00
Pfl_4376 / glyceraldehyde-3-phosphate dehydrogenase / -5.62
Pfl_4419 / outer membrane porin / -2.39
Pfl_4507 / methionyl-tRNA synthetase / -2.98
Pfl_4517 / argininosuccinate synthase / -3.47
Pfl_4545 / 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase / -2.66
Pfl_4588 / inositol-5-monophosphate dehydrogenase / -3.21
Pfl_4594 / 2-isopropylmalate synthase / -2.26
Pfl_4616 / Inositol monophosphatase / -12.3
Pfl_4617 / hypothetical protein / -2.72
Pfl_4648 / Cytochrome o ubiquinol oxidase subunit II / -4.56
Pfl_4691 / Cytochrome b/b6-like / -2.98
Pfl_4693 / 30S ribosomal protein S9 / -3.30
Pfl_4694 / 50S ribosomal protein L13 / -3.61
Pfl_4698 / AFG1-like ATPase / -2.71
Pfl_4727 / hypoxanthine-guanine phosphoribosyltransferase / -5.76
Pfl_4752 / 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase / -2.40
Pfl_4754 / 50S ribosomal protein L25/general stress protein Ctc / -2.40
Pfl_4787 / acetolactate synthase 3 regulatory subunit / -2.66
Pfl_4788 / acetolactate synthase 3 catalytic subunit / -4.85
Pfl_4804 / Transcriptional regulators, TraR/DksA family / -3.85
Pfl_4811 / 3-methyl-2-oxobutanoate hydroxymethyltransferase / -3.94
Pfl_4818 / Transport-associated / -10.6
Pfl_4855 / 30S ribosomal protein S20 / -5.44
Pfl_4860 / 50S ribosomal protein L21 / -2.63
Pfl_4861 / Polyprenyl synthetase / -2.07
Pfl_4877 / serine hydroxymethyltransferase / -3.05
Pfl_4994 / DedA / -3.59
Pfl_5005 / exodeoxyribonuclease VII small subunit / -3.01
Pfl_5040 / hypothetical protein / -3.60
Pfl_5050 / General substrate transporter / -2.99
Pfl_5065 / 30S ribosomal protein S8 / -2.65
Pfl_5079 / 50S ribosomal protein L3 / -2.16
Pfl_5080 / 30S ribosomal protein S10 / -3.30
Pfl_5084 / 30S ribosomal protein S12 / -2.40
Pfl_5091 / transcription antitermination protein NusG / -6.11
Pfl_5092 / preprotein translocase subunit SecE / -9.61
Pfl_5109 / S-adenosylmethionine decarboxylase / -3.02
Pfl_5147 / 30S ribosomal protein S21 / -2.95
Pfl_5170 / Acyl-CoA dehydrogenase-like / -8.24
Pfl_5387 / D-3-phosphoglycerate dehydrogenase / -2.22
Pfl_5416 / Peroxidase / -8.37
Pfl_5417 / outer membrane porin / -3.35
Pfl_5439 / hypothetical protein / -2.68
Pfl_5456 / transcription termination factor Rho / -4.01
Pfl_5505 / Ammonium transporter / -7.76
Pfl_5506 / Nitrogen regulatory protein P-II (GlnB, GlnK) / -3.13
Pfl_5536 / 50S ribosomal protein L33 / -3.45
Pfl_5537 / 50S ribosomal protein L28 / -5.16
Pfl_5621 / phosphoribosylaminoimidazole carboxylase ATPase subunit / -2.95
Pfl_5622 / Phosphoribosylaminoimidazole carboxylase / -7.43
Pfl_5626 / Sodium:alanine symporter / -4.14
Pfl_5639 / pyruvate carboxylase subunit B / -5.01
Pfl_5640 / acetyl-CoA carboxylase / -12.3
Pfl_5745 / ribonuclease P / -3.44