Supplemental Table 1. pH-dependent differentially expressed protein-encoding ORFs
Mean log2 Expression Indices / Mean log2 Differential Expression RatiospH 5.0 / pH 7.0 / pH 8.7 / pH 5.0 vs pH 7.0 / pH 8.7 vs pH 7.0 / pH 8.7 vs pH 5.0
Gene name / ORF / Cluster
Function unknown / b1171 / 8.350 / 8.562 / 10.783 / -0.212 / 2.221 / 2.433 / BH
aceE / Pyruvate dehydrogenase / b0114 / 13.616 / 11.688 / 12.215 / 1.928 / 0.527 / -1.401 / NL
aceF / Pyruvate dehydrogenase / b0115 / 13.323 / 11.522 / 11.923 / 1.801 / 0.402 / -1.400 / NL
aceK / Isocitrate dehydrogenase kinase / b4016 / 9.457 / 8.790 / 8.828 / 0.667 / 0.038 / -0.629 / AH
acnA / Aconitase A / b1276 / 10.094 / 9.325 / 9.182 / 0.769 / -0.143 / -0.912 / AH
acnB / Aconitase B; / b0118 / 12.096 / 11.061 / 11.020 / 1.036 / -0.041 / -1.077 / NL
acpD / Azoreductase, NADH-dependent / b1412 / 9.528 / 8.833 / 8.558 / 0.696 / -0.275 / -0.970 / AH
acrR / Regulatory protein for acrA and acrB / b0464 / 7.443 / 8.315 / 8.479 / -0.873 / 0.164 / 1.037 / AL
add / Adenosine deaminase / b1623 / 10.644 / 10.261 / 9.815 / 0.383 / -0.445 / -0.828 / AH
adhE / Alcohol dehydrogenase / b1663 / 10.881 / 10.838 / 10.459 / 0.043 / -0.380 / -0.422 / BL
adk / Adenylate kinase / b0474 / 12.277 / 11.492 / 11.707 / 0.785 / 0.215 / -0.571 / NL
aer / Aerotaxis and redox taxis sensor / b3072 / 9.894 / 10.326 / 9.624 / -0.432 / -0.702 / -0.270 / BL
ahpC / Alkyl hydroperoxide reductase / b0605 / 13.060 / 12.057 / 12.492 / 1.003 / 0.436 / -0.568 / NL
ahpF / NAD(P)H:peroxiredoxin oxidoreductase / b0606 / 11.634 / 10.857 / 10.635 / 0.777 / -0.222 / -0.999 / AH
alaT / Alanine tRNA 1B; rrnA operon / b8353 / 12.549 / 12.306 / 12.160 / 0.244 / -0.146 / -0.390 / AH
alaU / Alanine tRNA 1B; rrnD operon / b3276 / 12.717 / 12.225 / 12.141 / 0.492 / -0.084 / -0.576 / AH
aldA / Aldehyde dehydrogenase / b1415 / 10.344 / 9.571 / 10.336 / 0.773 / 0.764 / -0.009 / NL
allA (ybbT) / Ureidoglycolate hydrolase / b0505 / 8.617 / 9.3218 / 8.970 / -0.705 / -0.352 / 0.353 / NH
alx (ygjT) / Function unknown; induced by alkali / b3088 / 8.291 / 9.608 / 10.300 / -1.317 / 0.692 / 2.009 / AL
apaG / function unknown / b0050 / 11.010 / 10.314 / 10.678 / 0.696 / 0.365 / -0.332 / NL
apbA / Ketopantoate reductase / b0425 / 9.760 / 9.566 / 9.349 / 0.194 / -0.217 / -0.411 / AH
argS / Arginine--tRNA ligase / b1876 / 10.497 / 9.900 / 10.441 / 0.598 / 0.541 / -0.057 / NL
aroA / 5-enolpyruvyl shikimate-3-phosphate synthase / b0908 / 10.489 / 10.159 / 10.113 / 0.329 / -0.047 / -0.376 / AH
aroH / 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase / b1704 / 9.299 / 8.589 / 8.513 / 0.710 / -0.077 / -0.787 / AH
aroP / General aromatic amino acid transport / b0112 / 8.653 / 8.371 / 8.275 / 0.283 / -0.095 / -0.378 / AH
artI / Arg transport system / b0863 / 10.235 / 9.948 / 10.604 / 0.286 / 0.655 / 0.369 / BH
artM / Arg periplasmic transport system / b0861 / 9.994 / 10.108 / 10.401 / -0.115 / 0.293 / 0.407 / BH
asnA / Asparagine synthase A / b3744 / 9.109 / 9.444 / 9.966 / -0.335 / 0.522 / 0.857 / BH
aspA / L-aspartase / b4139 / 10.528 / 11.120 / 11.890 / -0.592 / 0.770 / 1.362 / BH
aspC / Aspartate aminotransferase / b0928 / 11.611 / 10.693 / 11.458 / 0.917 / 0.765 / -0.153 / NL
atpA / ATP synthase subunit alpha / b3734 / 12.480 / 12.368 / 12.828 / 0.111 / 0.460 / 0.349 / BH
atpB / ATP synthase subunit a / b3738 / 12.511 / 12.635 / 13.120 / -0.125 / 0.484 / 0.609 / BH
atpC / ATP synthase subunit epsilon / b3731 / 11.649 / 11.383 / 12.388 / 0.266 / 1.005 / 0.739 / BH
atpD / ATP synthase subunit beta / b3732 / 11.699 / 11.157 / 12.329 / 0.542 / 1.172 / 0.630 / BH
atpE / ATP synthase subunit c / b3737 / 13.162 / 12.981 / 13.483 / 0.182 / 0.503 / 0.321 / BH
atpF / ATP synthase subunit b / b3736 / 13.132 / 13.187 / 13.509 / -0.055 / 0.321 / 0.377 / BH
atpG / ATP synthase subunit gamma / b3733 / 12.794 / 12.422 / 13.054 / 0.372 / 0.632 / 0.260 / BH
atpH / ATP synthase subunit delta / b3735 / 13.135 / 13.308 / 13.494 / -0.172 / 0.186 / 0.358 / AL
atpI / ATP synthase subunit / b3739 / 11.889 / 11.872 / 12.371 / 0.017 / 0.499 / 0.482 / BH
avtA / Alanine-alpha-ketoisovalerate transaminase / b3572 / 10.037 / 9.516 / 9.759 / 0.521 / 0.243 / -0.278 / NL
b0100 / function unknown / b0100 / 9.889 / 9.380 / 9.489 / 0.508 / 0.109 / -0.400 / NL
b0725 / function unknown / b0725 / 12.761 / 11.748 / 11.109 / 1.012 / -0.639 / -1.652 / AH
b1172 / function unknown / b1172 / 9.496 / 9.974 / 11.290 / -0.479 / 1.316 / 1.794 / BH
b1364 / function unknown / b1364 / 7.877 / 7.509 / 7.356 / 0.368 / -0.153 / -0.522 / AH
b3837 / function unknown / b3837 / 10.046 / 9.912 / 10.430 / 0.134 / 0.517 / 0.384 / BH
b3913 / function unknown / b3913 / 8.577 / 10.755 / 11.753 / -2.177 / 0.999 / 3.176 / AL
bax / function unknown / b3570 / 9.909 / 10.272 / 10.990 / -0.363 / 0.717 / 1.081 / AL
bcsE (yhjS) / Function unknown / b3536 / 8.893 / 8.254 / 8.382 / 0.639 / 0.128 / -0.511 / AH
bioB / Biotin synthase / b0775 / 8.861 / 9.017 / 9.560 / -0.156 / 0.544 / 0.699 / AL
borD (ybcU) / Bacteriophage open reading / b0557 / 8.519 / 11.897 / 11.607 / -3.378 / -0.290 / 3.088 / AL
btuB / B-12 transporter / b3966 / 8.831 / 9.498 / 9.535 / -0.667 / 0.037 / 0.704 / AL
cadA / Lysine decarboxylase, acid-inducible / b4131 / 9.519 / 8.495 / 8.632 / 1.024 / 0.137 / -0.887 / AH
can (yadF) / Carbonic anhydrase / b0126 / 12.430 / 11.446 / 11.341 / 0.984 / -0.105 / -1.088 / NL
carA / Carbamoyl phosphate synthase / b0032 / 9.202 / 9.173 / 10.232 / 0.029 / 1.059 / 1.030 / BH
cca / tRNA nucleotidyltransferase / b3056 / 9.503 / 9.483 / 9.195 / 0.020 / -0.287 / -0.307 / BL
cdd / Cytidine deaminase / b2143 / 9.383 / 9.825 / 8.533 / -0.442 / -1.292 / -0.849 / BL
cdh / CDP-diglyceride hydrolase / b3918 / 8.633 / 8.9204 / 8.710 / -0.288 / -0.210 / 0.077 / NH
cfa / Cyclopropane fatty acid synthase / b1661 / 10.272 / 8.198 / 7.717 / 2.075 / -0.480 / -2.555 / AH
cheA / Autophosphorylating histidine sensor kinase of chemotactic response / b1888 / 10.494 / 11.619 / 8.420 / -1.125 / -3.199 / -2.074 / BL
cheB / Protein methylesterase; flagellar regulon / b1883 / 9.917 / 10.967 / 9.389 / -1.050 / -1.578 / -0.528 / BL
cheR / Chemotaxis MCP protein methyltransferase / b1884 / 9.997 / 10.562 / 9.549 / -0.564 / -1.013 / -0.448 / BL
cheW / Chemotaxis signal transducer / b1887 / 10.043 / 11.379 / 8.594 / -1.336 / -2.785 / -1.449 / BL
cheY / Response regulator for chemotactic signal transduction / b1882 / 10.683 / 11.772 / 10.462 / -1.089 / -1.310 / -0.221 / BL
cheZ / CheY-P phosphatase / b1881 / 9.281 / 10.786 / 7.587 / -1.505 / -3.199 / -1.694 / BL
cirA / Colicin I receptor production / b2155 / 9.816 / 10.701 / 10.961 / -0.885 / 0.260 / 1.145 / AL
cld (wzzB) / Regulator of LPS O-chain length / b2707 / 11.536 / 11.126 / 11.166 / 0.410 / 0.040 / -0.370 / NL
clpB / protein disaggregation chaperone / b2592 / 10.438 / 10.657 / 8.694 / -0.219 / -1.963 / -1.744 / BL
clpX / ATPase subunit of ClpXP protease / b0438 / 11.487 / 11.848 / 11.223 / -0.361 / -0.625 / -0.264 / BL
coaA / Pantothenate kinase / b3974 / 9.307 / 9.335 / 9.814 / -0.028 / 0.479 / 0.508 / BH
codB / Cytosine transport / b0336 / 8.444 / 8.469 / 9.062 / -0.025 / 0.593 / 0.617 / BH
cpxA / Membrane sensor kinase / b3911 / 9.658 / 10.118 / 10.348 / -0.461 / 0.230 / 0.691 / AL
cpxP / CpxAR-regulated periplasmic / b3914 / 7.477 / 10.709 / 11.711 / -3.232 / 1.002 / 4.234 / AL
cpxR / Response regulator / b3912 / 9.471 / 10.133 / 10.723 / -0.662 / 0.590 / 1.251 / AL
cspD / Inhibitor of DNA replication / b0880 / 8.412 / 8.811 / 9.885 / -0.398 / 1.074 / 1.473 / BH
cvpA / Affects Col V production; member of purF operon / b2313 / 9.397 / 9.049 / 10.442 / 0.348 / 1.393 / 1.045 / BH
cyaA / Adenylate cyclase / b3806 / 9.183 / 8.492 / 8.337 / 0.691 / -0.156 / -0.846 / AH
cydA / Cytochrome d (bd-I) terminal oxidase subunit I / b0733 / 10.678 / 10.946 / 11.818 / -0.268 / 0.872 / 1.140 / BH
cydB / Cytochrome d (bd-I) terminal oxidase subunit II / b0734 / 11.332 / 11.429 / 12.206 / -0.097 / 0.777 / 0.874 / BH
cydC / Cysteine exporter to periplasm required for cytochrome assembly / b0886 / 10.053 / 9.918 / 10.408 / 0.135 / 0.490 / 0.355 / BH
cydD / Cysteine exporter to periplasm required for cytochrome assembly / b0887 / 9.726 / 9.494 / 10.068 / 0.232 / 0.574 / 0.342 / BH
cyoA / Cytochrome o oxidase subunit II / b0432 / 13.525 / 12.365 / 12.582 / 1.160 / 0.217 / -0.943 / NL
cyoB / Cytochrome o oxidase subunit I / b0431 / 13.399 / 12.587 / 12.383 / 0.812 / -0.204 / -1.016 / AH
cyoC / Cytochrome o oxidase subunit III / b0430 / 13.222 / 12.196 / 12.215 / 1.026 / 0.019 / -1.007 / NL
cyoD / Cytochrome o oxidase subunit IV / b0429 / 13.278 / 12.449 / 12.257 / 0.829 / -0.192 / -1.021 / NL
cyoE / Cytochrome o oxidase subunit / b0428 / 12.056 / 10.962 / 11.187 / 1.094 / 0.225 / -0.869 / NL
cysK / Cysteine synthase,alkali-inducible / b2414 / 10.947 / 9.742 / 11.093 / 1.204 / 1.351 / 0.147 / NL
cysZ / ORF upstream of cysK / b2413 / 8.816 / 8.376 / 8.588 / 0.440 / 0.212 / -0.228 / NL
dadA / D-amino acid dehydrogenase / b1189 / 11.619 / 10.347 / 10.118 / 1.273 / -0.229 / -1.501 / AH
dadX / Alanine racemase; homodimeric / b1190 / 10.748 / 10.065 / 9.672 / 0.683 / -0.393 / -1.076 / AH
dapB / Dihydrodipicolinate reductase / b0031 / 10.740 / 10.156 / 10.033 / 0.585 / -0.123 / -0.707 / AH
dcuR (yjdG) / C4-dicarboxylate regulation of anaerobic fumurate respiratory system / b4028 / 8.010 / 8.230 / 8.285 / -0.220 / 0.055 / 0.275 / AL
dcuS (yjdH) / C4-dicarboxylate regulation of anaerobic fumurate respiratory system / b4029 / 8.283 / 8.608 / 8.673 / -0.324 / 0.065 / 0.390 / AL
dcyD (yedO) / D-cysteine desulfhydrase / b1919 / 10.080 / 9.408 / 9.259 / 0.672 / -0.149 / -0.821 / AH
dedA / function unknown / b2317 / 10.324 / 10.278 / 10.876 / 0.046 / 0.599 / 0.553 / BH
deoA / Thymidine phosphorylase / b4382 / 10.034 / 11.065 / 9.062 / -1.031 / -2.003 / -0.972 / BL
deoB / Phosphopentomutase, deoxyribouratase / b4383 / 10.889 / 11.620 / 10.118 / -0.731 / -1.502 / -0.771 / BL
deoC / Deoxyribose-phosphate aldolase / b4381 / 10.372 / 11.278 / 9.011 / -0.906 / -2.267 / -1.360 / BL
deoD / Purine nucleoside phosphorylase / b4384 / 11.903 / 12.640 / 11.307 / -0.737 / -1.333 / -0.596 / BL
dhaH (ycgC) / dihydroxyacetone-specific PTS protein / b1198 / 10.246 / 8.699 / 8.172 / 1.547 / -0.527 / -2.074 / AH
dhaK (ycgT) / Dihydroxyacetone kinase, subunit I / b1200 / 10.676 / 9.635 / 9.256 / 1.041 / -0.379 / -1.420 / AH
dhaL (ycgS) / Dihydroxyacetone kinase, subunit II / b1099 / 10.887 / 10.145 / 9.760 / 0.742 / -0.385 / -1.127 / AH
dinI / Inhibits RecA co-protease / b1061 / 9.236 / 9.104 / 9.672 / 0.132 / 0.568 / 0.436 / BH
dinJ / Induced by DNA damage / b0226 / 10.091 / 9.408 / 10.599 / 0.683 / 1.192 / 0.508 / BH
dksA / High copy suppresses mukB and TS growth and filamentation of dnaK mutant / b0145 / 10.806 / 11.362 / 11.533 / -0.556 / 0.171 / 0.727 / AL
dld / D-lactate dehydrogenase / b2133 / 9.646 / 8.728 / 9.293 / 0.919 / 0.566 / -0.353 / NL
dnaA / Initiator protein for DNA synthesis & global transcription regulator / b3702 / 10.81 / 11.382 / 10.979 / -0.573 / -0.403 / 0.170 / NH
dnaJ / DnaK co-chaperone / b0015 / 11.510 / 12.418 / 10.263 / -0.908 / -2.155 / -1.247 / BL
dnaK / HSP-70-type molecular chaperone / b0014 / 12.652 / 13.546 / 11.296 / -0.894 / -2.249 / -1.356 / BL
dnaN / DNA polymerase III beta subunit / b3701 / 11.05 / 11.502 / 11.019 / -0.455 / -0.483 / -0.029 / NH
dnaX / DNA polymerase III holoenzyme / b0470 / 10.531 / 11.048 / 11.126 / -0.517 / 0.078 / 0.940 / AL
dniR / Membrane-bound lytic transglycosylase MltD / b0211 / 9.527 / 10.721 / 11.608 / -1.194 / 0.887 / 2.081 / AL
dppC / Uptake of dipeptides and 5-aminolevulinic acid / b3542 / 9.375 / 9.722 / 9.690 / -0.346 / -0.032 / 0.315 / AL
dps / Stress response DNA-binding protein / b0812 / 10.888 / 9.757 / 9.863 / 1.130 / 0.105 / -1.025 / NL
dsbA / Thiol:disulfide interchange protein / b3860 / 10.883 / 10.797 / 11.914 / 0.086 / 1.117 / 1.031 / BH
dsbB / Disulfide oxidoreductase / b1185 / 9.867 / 9.505 / 10.016 / 0.362 / 0.511 / 0.149 / NL
dsbC / Disulfide bond isomerase / b2893 / 10.864 / 11.152 / 10.618 / -0.288 / -0.534 / -0.246 / BL
dusA (yjbN) / tRNA-dihydrouridine synthase A / b4049 / 9.779 / 10.351 / 10.273 / -0.572 / -0.078 / 0.494 / AL
eco / Ecotin, serine protease inhibitor / b2209 / 10.643 / 11.046 / 11.519 / -0.403 / 0.474 / 0.877 / AL
edd / Phosphogluconate dehydratase / b1851 / 11.057 / 10.897 / 10.510 / 0.160 / -0.387 / -0.547 / AH
emrA / EmrAB-TolC multidrug resistance pump / b2685 / 10.107 / 9.560 / 9.711 / 0.548 / 0.151 / -0.396 / NL
emrR / emrAB repressor, also regulates microcin synthesis / b2684 / 11.247 / 11.110 / 11.535 / 0.136 / 0.425 / 0.288 / BH
eno / Enolase; phosphoprotein / b2779 / 13.155 / 12.856 / 12.908 / 0.299 / 0.052 / -0.247 / AH
entE / Enterochelin synthase / b0594 / 9.434 / 10.517 / 10.132 / -1.083 / -0.386 / 0.698 / NH
eptB (yhjW) / KDO phosphoethanolamine transferase / b3546 / 8.872 / 8.774 / 9.390 / 0.098 / 0.616 / 0.518 / BH
fabI / Enoyl-ACP reductase, NADH dependent / b1288 / 11.861 / 10.772 / 11.611 / 1.088 / 0.839 / -0.250 / NL
fadL / Fatty acid transport protein / b2344 / 8.882 / 9.743 / 10.812 / -0.861 / 1.069 / 1.931 / BH
fadR / Repressor for fad regulon / b1187 / 10.262 / 9.689 / 10.180 / 0.573 / 0.491 / -0.082 / NL
fdhD / Required for formate dehydrogenase activity / b3895 / 9.558 / 10.279 / 10.703 / -0.721 / 0.424 / 1.145 / AL
fdoG / Formate dehydrogenase-O, aerobic / b3894 / 12.348 / 11.995 / 11.857 / 0.353 / -0.138 / -0.491 / AH
fdoH / Formate dehydrogenase-O Fe-S subunit / b3893 / 11.964 / 11.962 / 11.548 / 0.003 / -0.414 / -0.416 / BL
fdx / Ferredoxin / b2525 / 11.827 / 11.411 / 11.581 / 0.416 / 0.170 / -0.246 / NL
fecA / Ferric citrate uptake, outer membrane / b4291 / 9.007 / 11.614 / 10.487 / -2.608 / -1.128 / 1.480 / NH
fecB / Ferric citrate uptake, periplasmic / b4290 / 8.208 / 11.05 / 9.512 / -2.842 / -1.538 / 1.304 / NH
fecC / Ferric citrate transport membrane permease / b4289 / 9.765 / 10.969 / 10.452 / -1.204 / -0.518 / 0.687 / NH
fecD / Ferric citrate transport membrane permease / b4288 / 9.322 / 10.352 / 9.769 / -1.030 / -0.583 / 0.447 / NH
fecE / Ferric citrate ATP-binding / b4287 / 8.377 / 10.476 / 9.367 / -2.098 / -1.108 / 0.990 / NH
fepA / Ferrienterobactin outer membrane receptor / b0584 / 9.534 / 10.5 / 10.210 / -0.966 / -0.289 / 0.676 / NH
fhuC / Hydroxamate-dependent iron uptake / b0151 / 10.4 / 11.097 / 10.666 / -0.693 / -0.432 / 0.261 / NH
fhuD / Ferric hydroxamate binding protein / b0152 / 9.021 / 9.788 / 9.608 / -0.767 / -0.180 / 0.587 / AL
fimA / Fimbrin type 1, major structural subunit / b4314 / 12.228 / 10.636 / 9.649 / 1.592 / -0.987 / -2.579 / AH
fimC / Periplasmic chaperone for type 1 fimbriae / b4316 / 10.108 / 9.769 / 8.242 / 0.339 / -1.527 / -1.866 / AH
fimI / Required for pilus biosynthesis / b4315 / 10.210 / 9.039 / 8.334 / 1.171 / -0.704 / -1.876 / AH
flgA / Flagellar synthesis / b1072 / 11.364 / 11.625 / 10.569 / -0.261 / -1.056 / -0.795 / BL
flgB / Flagellar basal body rod subunit / b1073 / 12.525 / 12.717 / 11.598 / -0.192 / -1.120 / -0.928 / BL
flgC / Flagellar basal body rod subunit / b1074 / 12.912 / 13.169 / 11.928 / -0.257 / -1.241 / -0.984 / BL
flgD / Flagellar basal body rod modification / b1075 / 12.687 / 12.553 / 11.580 / 0.133 / -0.974 / -1.107 / BL
flgE / Flagellar hook subunit / b1076 / 13.046 / 12.774 / 11.918 / 0.272 / -0.856 / -1.128 / BL
flgF / Flagellar basal body rod subunit / b1077 / 12.611 / 12.502 / 11.263 / 0.109 / -1.239 / -1.348 / BL
flgG / Flagellar basal body rod major subunit / b1078 / 12.887 / 12.668 / 11.552 / 0.220 / -1.116 / -1.335 / BL
flgH / Flagellar synthesis, basal body L-ring / b1079 / 11.742 / 11.088 / 10.464 / 0.654 / -0.623 / -1.277 / AH
flgI / Basal body P-ring flagellar / b1079 / 11.474 / 11.485 / 10.267 / -0.011 / -1.218 / -1.207 / BL
flgJ / Flagellum-specific muramidase / b1080 / 10.846 / 10.817 / 9.960 / 0.030 / -0.857 / -0.886 / BL
flgK / hook-associated protein I / b1081 / 11.372 / 11.583 / 9.708 / -0.211 / -1.875 / -1.664 / BL
flgL / hook-associated protein / b1082 / 10.910 / 10.799 / 9.634 / 0.111 / -1.165 / -1.276 / BL
flgM / Anti-sigma 28 (FliA) factor / b1071 / 11.325 / 11.617 / 10.193 / -0.292 / -1.424 / -1.132 / BL
flgN / FlgN flagellar synthesis / b1070 / 11.399 / 11.694 / 10.128 / -0.295 / -1.567 / -1.272 / BL
flhA / Flagellar export pore protein / b1879 / 10.151 / 9.818 / 9.290 / 0.333 / -0.528 / -0.861 / AH
flhE / Function unknown / b1878 / 10.229 / 9.736 / 9.282 / 0.492 / -0.454 / -0.946 / AH
fliA / Transcription factor sigma 28 for class III flagellar operons / b1922 / 12.301 / 12.451 / 11.325 / -0.150 / -1.127 / -0.976 / BL
fliC / Flagellin, structural gene, H-antigen / b1923 / 12.118 / 13.284 / 8.722 / -1.165 / -4.561 / -3.396 / BL
fliD / Hook-associated protein 2 / b1924 / 11.200 / 11.511 / 9.558 / -0.311 / -1.953 / -1.641 / BL
fliE / Flagellar synthesis; basal body component / b1937 / 10.989 / 11.467 / 9.786 / -0.478 / -1.681 / -1.203 / BL
fliF / Flagellar basal body M-ring protein / b1938 / 11.989 / 12.147 / 10.932 / -0.159 / -1.216 / -1.057 / BL
fliG / Motor switching and energizing / b1939 / 11.877 / 11.696 / 10.383 / 0.182 / -1.313 / -1.495 / BL
fliH / Negative regulator of FliI ATPase y involved in flagellar assembly and export / b1940 / 11.158 / 10.769 / 9.524 / 0.389 / -1.245 / -1.634 / BL
fliI / Cytoplasmic membrane ATPase involved in flagellar assembly / b1941 / 10.662 / 10.391 / 9.153 / 0.270 / -1.238 / -1.508 / BL
fliJ / Flagellar biosynthesis / b1942 / 11.170 / 11.239 / 9.835 / -0.068 / -1.404 / -1.336 / BL
fliK / Hook filament junction; controls hook length / b1943 / 10.575 / 10.297 / 9.111 / 0.278 / -1.186 / -1.464 / BL
fliL / Affects rotational direction of flagella during chemotaxis / b1944 / 12.056 / 12.159 / 11.076 / -0.102 / -1.083 / -0.981 / BL
fliM / motor switching and energizing / b1945 / 11.706 / 11.678 / 10.624 / 0.029 / -1.053 / -1.082 / BL
fliN / Flagellar switch protein / b1946 / 11.746 / 11.473 / 10.598 / 0.273 / -0.875 / -1.148 / BL
fliO / Flagellar synthesis / b1947 / 11.229 / 11.038 / 10.117 / 0.191 / -0.921 / -1.112 / BL
fliP / Flagellar synthesis / b1948 / 10.997 / 10.578 / 9.910 / 0.419 / -0.669 / -1.087 / AH
fliQ / Flagellar synthesis / b1949 / 10.809 / 10.346 / 9.365 / 0.463 / -0.980 / -1.444 / AH
fliR / Flagellar synthesis / b1950 / 9.939 / 9.015 / 8.116 / 0.924 / -0.899 / -1.822 / AH
fliS / cytosolic chaperone / b1925 / 10.718 / 10.892 / 8.945 / -0.174 / -1.947 / -1.772 / BL
fliT / Flagellar synthesis / b1926 / 10.946 / 11.269 / 10.248 / -0.323 / -1.021 / -0.698 / BL
fliY / Cystine-binding protein / b1920 / 10.678 / 10.445 / 10.194 / 0.233 / -0.252 / -0.484 / AH
fliZ / may regulate FliA (sigma 28) / b1921 / 11.757 / 11.613 / 10.448 / 0.144 / -1.165 / -1.309 / BL
flxA / function unknown / b1566 / 9.888 / 10.939 / 7.932 / -1.051 / -3.007 / -1.956 / BL
fnr / Global transcription factor for anaerobic growth / b1334 / 11.613 / 11.237 / 11.675 / 0.376 / 0.438 / 0.063 / NL
folD / Methenyltetrahydrofolate dehydrogenase / b0529 / 10.486 / 10.020 / 10.839 / 0.466 / 0.819 / 0.353 / BH
folE / GTP cyclohydrolase I / b2153 / 10.976 / 10.024 / 10.723 / 0.952 / 0.699 / -0.253 / NL
folP / Dihydropteroate synthase / b3177 / 10.129 / 10.673 / 10.506 / -0.545 / -0.168 / 0.377 / AL
fpr / Ferredoxin NADP+ reductase / b3924 / 9.610 / 9.045 / 9.321 / 0.565 / 0.275 / -0.289 / NL
frdA / Fumarate reductase / b4154 / 9.609 / 9.914 / 9.960 / -0.305 / 0.046 / 0.351 / AL
frdC / Fumarate reductase membrane anchor polypeptide / b4152 / 8.726 / 9.104 / 9.097 / -0.378 / -0.008 / 0.370 / AL
fre / NAD(P)H-flavin oxidoreductase / b3844 / 11.335 / 10.557 / 10.971 / 0.778 / 0.414 / -0.364 / NL
frwB / Putative fructose-like PTS system enzyme IIB / b3950 / 7.652 / 8.4073 / 7.927 / -0.755 / -0.480 / 0.275 / NH
ftnB( yecI) / Ferritin-like protein, function unknown / b1902 / 8.353 / 9.042 / 9.501 / -0.690 / 0.459 / 1.148 / AL
ftsA / Cell division and septation protein / b0094 / 11.4 / 12.143 / 11.704 / -0.740 / -0.440 / 0.300 / NH
ftsQ / Cell division and growth of wall at septum / b0093 / 11.13 / 11.688 / 11.106 / -0.556 / -0.582 / -0.025 / NH
fucI / L-Fucose isomerase / b2802 / 8.615 / 9.308 / 9.135 / -0.693 / -0.173 / 0.520 / AL
fucK / L-Fuculose kinase / b2803 / 7.63 / 8.8888 / 8.370 / -1.259 / -0.519 / 0.740 / NH
fucR / Positive regulatory protein for fuc regulon / b2805 / 8.251 / 8.296 / 8.791 / -0.046 / 0.495 / 0.541 / BH
fumA / Fumarase A / b1612 / 11.213 / 10.618 / 9.971 / 0.595 / -0.647 / -1.242 / AH
galF / Putative regulatory subunit for GalU / b2042 / 11.292 / 10.708 / 11.334 / 0.584 / 0.627 / 0.042 / NL
galK / Galactokinase / b0757 / 10.88 / 11.499 / 10.936 / -0.616 / -0.562 / 0.053 / NH
galM / Galactose mutarotase / b0756 / 10.273 / 10.892 / 10.245 / -0.619 / -0.647 / -0.028 / BL
gapA / Glyceraldehyde 3-P dehydrogenase A / b1779 / 13.730 / 13.638 / 12.886 / 0.093 / -0.752 / -0.844 / BL
gapC / Glyceraldehyde 3-phosphate dehydrogenase C / b1416 / 10.243 / 9.550 / 9.686 / 0.693 / 0.136 / -0.557 / AH
gatA / Galactitol-specific enzyme IIA of PTS / b0294 / 13.485 / 12.556 / 11.930 / 0.929 / -0.626 / -1.555 / AH
gatB / Galactitol-specific enzyme IIB of PTS / b0293 / 13.290 / 12.658 / 11.763 / 0.632 / -0.895 / -1.528 / AH
gatC / Galactitol-specific enzyme IIC of PTS / b0292 / 12.038 / 11.065 / 10.116 / 0.973 / -0.949 / -1.922 / AH
gatD / Galactitol-1-phosphate dehydrogenase / b0291 / 10.947 / 9.910 / 9.017 / 1.037 / -0.893 / -1.930 / AH
gatY / D-Tagatose-1,6-bisphosphate aldolase / b0296 / 13.558 / 12.712 / 12.229 / 0.846 / -0.483 / -1.329 / AH
gatZ / required for full activity and stabilty of GatY / b0295 / 13.656 / 12.882 / 12.276 / 0.774 / -0.605 / -1.380 / AH
gcvH / Glycine cleavage / b2904 / 11.175 / 12.045 / 12.309 / -0.870 / 0.264 / 1.134 / AL
gcvT / Aminomethyl transferase / b2905 / 10.822 / 11.356 / 12.062 / -0.534 / 0.706 / 1.240 / AL
gdhA / Glutamate dehydrogenase / b1761 / 10.150 / 10.230 / 9.735 / -0.080 / -0.496 / -0.416 / BL
ghrA (ycdW) / Putative 2-hydroxyacid dehydrogenase / b1033 / 10.169 / 9.541 / 10.141 / 0.628 / 0.600 / -0.028 / NL
glcC / Regulatory gene for glc operon / b2890 / 8.878 / 8.405 / 8.107 / 0.473 / -0.298 / -0.771 / AH
glf / UDP-galactopyranose mutase / b2036 / 10.449 / 9.649 / 10.858 / 0.800 / 1.209 / 0.409 / NL
glgS / Glycogen synthesis protein / b3049 / 7.703 / 8.479 / 8.649 / -0.776 / 0.170 / 0.945 / AL
glmU / Bifunctional glucosamine-1-phosphate acetyltransferase / b3730 / 11.575 / 11.773 / 12.063 / -0.198 / 0.290 / 0.488 / BH
gloA / Glyoxalase I / b1651 / 12.056 / 10.922 / 11.258 / 1.134 / 0.336 / -0.798 / NL
glpA / Glycerol-3-phosphate dehydrogenase / b2241 / 9.807 / 10.007 / 10.565 / -0.200 / 0.558 / 0.758 / AL
glpB / sn-Glycerol-3-phosphate dehydrogenase / b2242 / 10.120 / 10.245 / 10.682 / -0.124 / 0.437 / 0.562 / BH
glpC / sn-Glycerol-3-phosphate dehydrogenase / b2243 / 9.694 / 9.862 / 10.331 / -0.169 / 0.469 / 0.638 / BH
glpX / Fructose 1,6 bisphosphatase / b3925 / 9.973 / 10.135 / 10.510 / -0.162 / 0.375 / 0.537 / BH
gltA / Citrate synthase / b0720 / 12.410 / 12.122 / 11.563 / 0.288 / -0.559 / -0.846 / AH
gltB / Glutamate synthase, large subunit / b3212 / 11.225 / 10.379 / 8.954 / 0.846 / -1.425 / -2.271 / AH
gltD / Glutamate synthase, small subunit / b3213 / 11.282 / 10.832 / 10.102 / 0.451 / -0.729 / -1.180 / AH
gltX / Glutamate--tRNA ligase / b2400 / 11.849 / 10.955 / 11.269 / 0.894 / 0.314 / -0.580 / NL
glyA / Serine hydroxymethyltransferase / b2551 / 10.572 / 10.248 / 11.376 / 0.324 / 1.128 / 0.804 / BH
gmhA / D-sedoheptulose 7-phosphate isomerase / b0222 / 10.329 / 9.684 / 10.168 / 0.645 / 0.484 / -0.161 / NL
gnd / Gluconate-6-phosphate dehydrogenase / b2029 / 12.547 / 11.652 / 12.003 / 0.895 / 0.351 / -0.544 / NL
gntT / High-affinity gluconate transport / b3415 / 9.254 / 9.8672 / 9.505 / -0.613 / -0.362 / 0.251 / NH
gntX (yhgH) / Unknown role in gluconate metabolism / b3413 / 10.369 / 10.980 / 10.304 / -0.611 / -0.676 / -0.065 / BL
gpmA / Phosphoglycerate mutase / b0755 / 12.073 / 11.771 / 11.653 / 0.303 / -0.118 / -0.421 / AH
gpmB / Function unknown / b4395 / 9.666 / 9.706 / 10.026 / -0.040 / 0.320 / 0.360 / BH
gpmM (yibO) / Phosphoglycerate mutase / b3612 / 9.868 / 10.444 / 9.986 / -0.577 / -0.459 / 0.118 / NH
gppA / Guanosine pentaphosphatase / b3779 / 9.850 / 9.357 / 9.833 / 0.493 / 0.476 / -0.017 / NL
gpsA / sn-Glycerol-3-phosphate dehydrogenase / b3608 / 11.46 / 11.95 / 11.417 / -0.492 / -0.534 / -0.041 / NH
gpt / Guanine-xanthine phosphoribosyltransferase / b0238 / 11.404 / 10.797 / 11.144 / 0.606 / 0.347 / -0.259 / NL
groL (mopA) / Chaperonin Cpn60 / b4143 / 11.927 / 12.698 / 10.864 / -0.770 / -1.833 / -1.063 / BL
groS (mopB) / Chaperonin Cpn10 / b4142 / 13.064 / 13.930 / 12.217 / -0.866 / -1.713 / -0.847 / BL
grpE / Nucleotide exchange factor for the DnaKJ chaperone / b2614 / 11.750 / 12.242 / 11.101 / -0.491 / -1.141 / -0.650 / BL
grxA / Glutaredoxin 1 / b0849 / 11.119 / 9.453 / 9.347 / 1.666 / -0.106 / -1.772 / AH
grxB / Glutaredoxin 2 / b1064 / 9.812 / 9.042 / 9.706 / 0.771 / 0.665 / -0.106 / NL
gshA / gamma-Glutamylcysteine synthase / b2688 / 11.616 / 11.462 / 11.303 / 0.154 / -0.159 / -0.313 / AH
gshB / Glutathione synthase / b2947 / 11.089 / 10.321 / 10.241 / 0.768 / -0.081 / -0.848 / AH
guaA / GMP synthase / b2507 / 11.082 / 9.916 / 11.317 / 1.166 / 1.402 / 0.235 / NL
guaB / Inosine-5'-monophosphate (IMP) dehydrogenase / b2508 / 11.596 / 10.330 / 11.737 / 1.267 / 1.407 / 0.141 / NL
hdeA / Periplasmic chaperone of acid-denatured proteins / b3510 / 9.187 / 8.346 / 8.020 / 0.841 / -0.326 / -1.167 / AH
hdeB / Periplasmic protein / b3509 / 8.140 / 7.358 / 6.737 / 0.782 / -0.622 / -1.404 / AH
hemB / 5-aminolevulinate dehydratase / b0369 / 10.696 / 9.712 / 9.802 / 0.984 / 0.090 / -0.894 / AH
hemM / OM lipoprotein / b1209 / 10.645 / 10.200 / 10.677 / 0.444 / 0.477 / 0.032 / NL
hflB / regulate a cII-specific protease / b3178 / 11.568 / 12.178 / 12.080 / -0.610 / -0.098 / 0.512 / AL
hflC / regulate a cII-specific protease / b4175 / 11.428 / 11.904 / 12.003 / -0.476 / 0.099 / 0.575 / AL
hflK / regulates lysogeny / b4174 / 11.516 / 12.155 / 12.278 / -0.639 / 0.122 / 0.762 / AL
hflX / putative GTPase in hflA operon / b4173 / 11.443 / 12.497 / 12.366 / -1.054 / -0.130 / 0.924 / AL
hha / Histone-like / b0460 / 11.268 / 10.723 / 11.371 / 0.546 / 0.648 / 0.103 / NL
himD / Integration Host Factor / b0912 / 11.504 / 11.258 / 11.634 / 0.246 / 0.376 / 0.130 / BH
hisC / Histidinol-phosphate aminotransferase / b2021 / 9.342 / 9.088 / 10.073 / 0.253 / 0.984 / 0.731 / BH
hisF / Cyclase component of imidazole glycerol phosphate (IGP) synthase / b2025 / 9.700 / 9.550 / 10.253 / 0.150 / 0.703 / 0.553 / BH
hisH / Amidotransferase component of imidazole glycerol phosphate (IGP) synthase / b2023 / 9.813 / 9.779 / 10.171 / 0.034 / 0.393 / 0.359 / BH
hisI / PR-ATP pyrophosphatase and PR-AMP cyclohydrolase / b2026 / 9.590 / 9.356 / 9.997 / 0.234 / 0.641 / 0.407 / BH
hisJ / high-affinity histidine transport system / b3209 / 9.811 / 9.960 / 10.360 / -0.149 / 0.400 / 0.549 / BH
hlpA / molecular chaperone / b1078 / 12.636 / 12.537 / 11.876 / 0.099 / -0.661 / -0.759 / BL
hpt / Hypoxanthine-guanine phosphoribosyltransferase / b3666 / 11.323 / 10.937 / 11.288 / 0.386 / 0.350 / -0.035 / NL
hrpB / ATP-dependent helicase / b0148 / 9.774 / 10.268 / 9.842 / -0.495 / -0.426 / 0.068 / NH
hsdR / Endonuclease R, / b4350 / 9.058 / 8.800 / 8.597 / 0.258 / -0.203 / -0.461 / AH
hsdS / Specificity determinant for HsdM and HsdR / b4348 / 9.713 / 8.844 / 8.618 / 0.870 / -0.226 / -1.096 / AH
hslJ / novobiocin resistance / b1379 / 10.185 / 9.817 / 9.141 / 0.368 / -0.676 / -1.044 / AH
hslO (yrfI) / cytoplasmic heat shock chaperone / b3401 / 10.63 / 12.078 / 10.341 / -1.453 / -1.737 / -0.284 / BL
hslR (yrfH) / an abundant heat shock protein / b3400 / 11.01 / 12.781 / 10.841 / -1.773 / -1.940 / -0.168 / NH
hslU / ATP-dependent protease HslVU / b3931 / 11.762 / 12.503 / 10.815 / -0.742 / -1.688 / -0.946 / BL
hslV / ATP-dependent protease HslVU / b3932 / 11.656 / 12.781 / 10.868 / -1.125 / -1.913 / -0.788 / BL
htpG / Heat shock chaperone / b0473 / 10.726 / 12.212 / 9.773 / -1.486 / -2.439 / -0.953 / BL
htpX / function Unknown / b1829 / 9.587 / 10.599 / 11.182 / -1.012 / 0.582 / 1.595 / AL
htrG (ygiM) / Function unknown / b3055 / 10.541 / 10.423 / 9.809 / 0.118 / -0.614 / -0.732 / BL
hupA / Histone-like protein HU-beta / b4000 / 12.43 / 13.164 / 12.688 / -0.733 / -0.476 / 0.257 / NH
hybA / Hydrogenase 2 component / b2996 / 9.363 / 9.812 / 9.577 / -0.449 / -0.235 / 0.214 / NH
iadA / Isoaspartyl dipeptidase / b4328 / 9.393 / 8.932 / 9.051 / 0.461 / 0.119 / -0.342 / NL
iap / Aminopeptidase / b2753 / 8.420 / 8.103 / 7.779 / 0.317 / -0.324 / -0.641 / AH
ibpB / Chaperone / b3686 / 8.906 / 10.597 / 7.978 / -1.691 / -2.618 / -0.928 / BL
icdA / Isocitrate dehydrogenase / b1136 / 13.230 / 12.019 / 11.958 / 1.211 / -0.061 / -1.272 / AH
idi / isopentenyl diphosphate isomerase / b2889 / 9.258 / 8.608 / 8.364 / 0.651 / -0.243 / -0.894 / AH
idnT / L-idonate transporter / b4265 / 8.88 / 9.521 / 9.077 / -0.641 / -0.444 / 0.197 / NH
ilvB / Acetohydroxy acid synthase I / b3671 / 9.688 / 10.169 / 10.484 / -0.481 / 0.315 / 0.796 / AL
ilvG / Acetohydroxy acid synthase II / b3767 / 9.098 / 9.560 / 9.689 / -0.462 / 0.129 / 0.590 / AL
ilvN / Acetohydroxy acid synthase I / b3670 / 8.300 / 9.213 / 9.987 / -0.913 / 0.774 / 1.687 / AL
insA1 / function Unknown / b0022 / 10.274 / 9.085 / 10.040 / 1.190 / 0.956 / -0.234 / NL
insA2 / function Unknown / b0265 / 10.393 / 9.542 / 10.150 / 0.851 / 0.608 / -0.242 / NL
ispE (ychB) / isopentenyl phosphate kinase / b1208 / 11.198 / 11.146 / 11.722 / 0.052 / 0.575 / 0.524 / BH
ispF (ygbB) / 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase / b2746 / 11.061 / 10.562 / 10.491 / 0.499 / -0.071 / -0.570 / AH
ivbL / ilvB operon leader peptide / b3672 / 10.274 / 10.953 / 11.909 / -0.679 / 0.956 / 1.635 / AL
katG / Catalase-hydrogen peroxidase I / b3942 / 10.273 / 10.851 / 10.537 / -0.578 / -0.313 / 0.265 / AL
kdsA / 3-deoxy-D-manno-octulosonate 8-phosphate synthase / b1215 / 11.070 / 9.949 / 10.534 / 1.120 / 0.585 / -0.535 / NL
kdsB / 3-deoxy-manno-octulosonate cytidylyltransferase / b0918 / 10.397 / 9.923 / 10.514 / 0.474 / 0.591 / 0.117 / NL
kdtA / 3-deoxy-D-manno-octulosonate(Kdo)-lipid A transferase / b3633 / 10.027 / 10.238 / 10.442 / -0.211 / 0.204 / 0.415 / AL
kgtP / Alpha-ketoglutarate permease / b2587 / 12.409 / 10.785 / 10.567 / 1.624 / -0.217 / -1.841 / AH
lamB / Maltoporin / b4036 / 8.481 / 13.362 / 9.626 / -4.881 / -3.735 / 1.146 / NH
lgt / diacylglycerol transferase / b2828 / 11.056 / 10.627 / 11.044 / 0.429 / 0.417 / -0.012 / NL
lipA / Lipoic acid synthase / b0628 / 11.168 / 10.614 / 10.289 / 0.555 / -0.325 / -0.880 / AH
lipB / Lipoyl-protein ligase / b0630 / 10.199 / 10.326 / 9.836 / -0.127 / -0.490 / -0.363 / BL
lldD / L-lactate dehydrogenase / b3605 / 12.021 / 11.407 / 10.853 / 0.613 / -0.554 / -1.167 / AH
lldP / L-lactate permease / b3603 / 11.740 / 10.213 / 10.432 / 1.527 / 0.219 / -1.307 / NL
lnt / Apolipoprotein N-acetyltransferase / b0657 / 10.04 / 10.441 / 10.155 / -0.401 / -0.286 / 0.114 / NH
lon / ATP-dependent protease LA / b0439 / 11.564 / 12.165 / 10.499 / -0.600 / -1.666 / -1.065 / BL
lpdA / Lipoamide dehydrogenase / b0116 / 13.570 / 12.062 / 12.344 / 1.507 / 0.281 / -1.226 / NL
lpxB / Lipid A disaccharide synthase / b0182 / 10.66 / 11.102 / 10.917 / -0.441 / -0.185 / 0.256 / NH
lpxD / Lipid A biosynthesis / b0179 / 11.985 / 11.668 / 11.519 / 0.318 / -0.148 / -0.466 / AH
luxS (ygaG) / Production of autoinducer 2 (AI-2), / b2687 / 11.044 / 10.323 / 10.530 / 0.721 / 0.207 / -0.514 / NL
lysC / Aspartokinase III / b4024 / 9.838 / 8.374 / 8.148 / 1.464 / -0.226 / -1.690 / AH
lysP / Lysine permease / b2156 / 11.214 / 8.553 / 9.516 / 2.662 / 0.963 / -1.698 / NL
lysU / Lysine--tRNA ligase / b4129 / 11.250 / 10.706 / 10.629 / 0.544 / -0.077 / -0.621 / AH
maa (ylaD) / Maltose O-acetyltransferase / b0459 / 9.150 / 9.649 / 9.893 / -0.499 / 0.243 / 0.743 / AL
malE / Maltose-binding protein / b4034 / 9.637 / 13.061 / 10.128 / -3.425 / -2.933 / 0.491 / NH
malF / Maltose transport complex / b4033 / 10.22 / 11.234 / 10.299 / -1.016 / -0.935 / 0.082 / NH
malG / Maltose transport complex / b4032 / 9.269 / 10.846 / 9.344 / -1.577 / -1.502 / 0.075 / NH
malK / Maltose transport complex / b4035 / 7.888 / 12.677 / 8.929 / -4.790 / -3.748 / 1.041 / NH
malM / Periplasmic protein / b4037 / 7.619 / 12.262 / 8.482 / -4.643 / -3.780 / 0.863 / NH
malP / Maltodextrin phosphorylase / b3417 / 8.29 / 12.29 / 8.917 / -4.000 / -3.373 / 0.627 / NH
malQ / Amylomaltase / b3416 / 8.647 / 11.969 / 9.086 / -3.322 / -2.883 / 0.439 / NH
malT / Positive regulator for mal regulon / b3418 / 9.037 / 9.140 / 9.757 / -0.103 / 0.617 / 0.720 / BH
manX / Mannose phosphotransferase system / b1817 / 10.993 / 10.993 / 11.510 / 0.000 / 0.517 / 0.517 / AL
map / methionine aminopeptidase / b0168 / 11.758 / 11.248 / 11.304 / 0.510 / 0.056 / -0.454 / AH
marA / Transcription activator of multiple antibiotic resistance (Mar) locus / b1531 / 11.493 / 10.172 / 9.656 / 1.321 / -0.516 / -1.836 / AH
marB / Function unknown / b1532 / 9.825 / 8.931 / 8.759 / 0.894 / -0.172 / -1.066 / AH
marR / Transcription repressor of multiple antibiotic resistance (Mar) locus / b1530 / 11.178 / 10.826 / 10.389 / 0.352 / -0.437 / -0.789 / AH
mdaB / Probable nitroreductase / b3028 / 11.179 / 10.735 / 10.512 / 0.444 / -0.223 / -0.667 / AH
mdlB / Multidrug resistance-like protein / b0449 / 9.877 / 10.689 / 9.857 / -0.812 / -0.832 / -0.020 / NH
mdoB / Phosphoglycerol transferase I activity / b4359 / 10.139 / 10.308 / 10.641 / -0.169 / 0.333 / 0.502 / BH
mdtG (yceE) / Multidrug transporter / b1053 / 8.992 / 8.350 / 8.361 / 0.641 / 0.011 / -0.630 / AH
mdtI / Multidrug resistance efflux protein / b1599 / 9.911 / 9.069 / 9.282 / 0.842 / 0.214 / -0.629 / NL
mdtJ / Multidrug resistance efflux protein / b1600 / 11.001 / 9.618 / 10.068 / 1.383 / 0.450 / -0.933 / NL
menA / 1, 4-dihydroxy-2-naphthoic acid (DHNA)-octaprenyltransferase / b3930 / 9.37 / 9.8572 / 9.411 / -0.487 / -0.446 / 0.041 / NH
menB / 1,4-Dihydroxy-2-naphthoate synthase / b2262 / 10.331 / 9.543 / 10.085 / 0.788 / 0.542 / -0.246 / NL
menF / Isochorismate synthase / b2265 / 10.458 / 9.649 / 9.405 / 0.809 / -0.244 / -1.053 / AH
mepA / Murein DD-endopeptidase / b2328 / 9.839 / 8.935 / 9.219 / 0.904 / 0.284 / -0.620 / NL
metG / Methionine--tRNA liga / b2114 / 10.379 / 9.893 / 10.345 / 0.486 / 0.452 / -0.034 / NL
metK / S-adenosylmethionine synthase / b2942 / 10.952 / 10.130 / 9.881 / 0.823 / -0.248 / -1.071 / NL
metN (abc) / D- and L-methionine ABC transporter / b0199 / 9.902 / 9.765 / 9.411 / 0.137 / -0.354 / -0.491 / AH
mhpC / Dihydroxyphenylpropionate-ring-fission-product hydrolase / b0349 / 8.738 / 9.616 / 9.457 / -0.878 / -0.159 / 0.719 / AL
miaA / dimethylallyl diphosphate:tRNA dimethylallyltransferase / b4171 / 12.067 / 13.300 / 12.893 / -1.234 / -0.408 / 0.826 / AL
miaB (yleA) / Function unknown / b0661 / 11.281 / 10.435 / 10.830 / 0.846 / 0.395 / -0.451 / NL
mipA (yeaF) / MltA-interacting protein / b1782 / 12.224 / 11.619 / 12.309 / 0.605 / 0.690 / 0.085 / NL
mltB / Membrane-bound lytic transglycosylase / b2701 / 10.11 / 10.847 / 10.427 / -0.739 / -0.419 / 0.320 / NH
mltC / Membrane-bound lytic transglycosylase / b2963 / 10.203 / 10.011 / 9.750 / 0.192 / -0.261 / -0.453 / AH
modB / Molybdate uptake / b0764 / 9.115 / 9.358 / 8.878 / -0.243 / -0.480 / -0.237 / BL
modC / Molybdate uptake / b0765 / 9.604 / 9.9484 / 9.539 / -0.344 / -0.409 / -0.065 / NH
motA / Flagellar-regulon member / b1890 / 9.849 / 10.531 / 8.683 / -0.682 / -1.847 / -1.166 / BL
motB / Flagellar-regulon member / b1889 / 10.584 / 11.826 / 8.587 / -1.241 / -3.238 / -1.997 / BL
mqo (yojH) / Malate oxidoreductase / b2210 / 11.622 / 9.761 / 9.547 / 1.861 / -0.213 / -2.075 / AH
mreB / MreB filaments participate in directional chromosome movement and segregation / b3251 / 11.705 / 11.447 / 11.755 / 0.258 / 0.308 / 0.050 / NL
mrp / Function unknown / b2113 / 10.957 / 10.345 / 10.569 / 0.612 / 0.224 / -0.388 / NL
mtn (pfs) / 5'-Methylthioadenosine/S-adenosylhomocysteine (SAH) nucleosidase / b0159 / 10.349 / 9.834 / 10.101 / 0.515 / 0.267 / -0.247 / NL
murE / meso-diaminopimelate adding enzyme / b0085 / 11.208 / 10.934 / 10.635 / 0.274 / -0.299 / -0.574 / AH
murF / D-alanyl:D-alanine adding enzyme / b0086 / 11.147 / 10.931 / 10.761 / 0.216 / -0.170 / -0.386 / AH
murG / N-acetylglucosaminyl transferase / b0090 / 10.21 / 10.533 / 10.169 / -0.319 / -0.364 / -0.045 / NH
mutL / Methyl-directed mismatch repair / b4170 / 9.481 / 11.184 / 11.481 / -1.702 / 0.298 / 2.000 / AL
nadA / Quinolinate synthase / b0750 / 8.260 / 9.252 / 8.849 / -0.992 / -0.403 / 0.589 / AL
nadE / NAD synthase / b1740 / 10.223 / 9.529 / 9.796 / 0.694 / 0.267 / -0.427 / NL
napC / Cytochrome electron source for NapAB / b2202 / 9.167 / 9.9646 / 9.583 / -0.797 / -0.382 / 0.416 / NH
narY / Nitrate reductase II / b1467 / 8.342 / 8.6032 / 8.300 / -0.261 / -0.303 / -0.042 / NH
ndh / Respiratory NADH dehydrogenase II / b1109 / 10.404 / 9.616 / 9.777 / 0.789 / 0.161 / -0.628 / NL
ndk / Nucleoside diphosphate kinase / b2518 / 11.987 / 11.244 / 11.600 / 0.743 / 0.356 / -0.387 / NL
nemA / N-Ethylmaleimide reductase / b1650 / 12.009 / 9.949 / 10.351 / 2.060 / 0.402 / -1.657 / NL
nfnB / Nitroreductase B / b0578 / 12.006 / 11.187 / 10.984 / 0.818 / -0.204 / -1.022 / AH
nfsA (mdaA) / Nitroreductase A / b0851 / 11.416 / 10.854 / 10.436 / 0.561 / -0.419 / -0.980 / AH
nhaB / Na+/H+ antiporter 2 / b1186 / 10.043 / 9.866 / 9.021 / 0.177 / -0.845 / -1.022 / BL
nlpA / Lipoprotein in outer membrane vesicles / b3661 / 7.602 / 7.520 / 6.963 / 0.081 / -0.558 / -0.639 / BL
nmpC / Outer membrane porin / b0553 / 8.968 / 12.980 / 12.929 / -4.012 / -0.051 / 3.961 / AL
nrdD / Ribonucleoside triphosphate reductase, class III / b4238 / 7.999 / 9.411 / 10.181 / -1.412 / 0.770 / 2.182 / AL
nrdF / Ribonucleoside diphosphate reductase 2 / b2676 / 8.663 / 9.4504 / 8.617 / -0.787 / -0.834 / -0.046 / NH
nrdG / Ribonucleotide reductase activating enzyme / b4237 / 7.836 / 8.524 / 9.030 / -0.688 / 0.506 / 1.194 / AL
nudH (ygdP) / Di-adenosine pentaphosphate pyrophosphatase / b2830 / 11.153 / 11.445 / 11.461 / -0.292 / 0.015 / 0.307 / AL
nuoC / NADH:ubiquinone oxidoreductase subunit C / b2286 / 12.849 / 12.409 / 12.325 / 0.440 / -0.084 / -0.524 / AH
nuoG / NADH:ubiquinone oxidoreductase subunit G / b2283 / 12.409 / 11.884 / 11.987 / 0.525 / 0.103 / -0.422 / NL
nuoH / NADH:ubiquinone oxidoreductase subunit H / b2282 / 12.534 / 11.970 / 12.155 / 0.564 / 0.185 / -0.379 / NL
nuoI / NADH:ubiquinone oxidoreductase subunit I / b2281 / 12.473 / 11.682 / 11.992 / 0.792 / 0.310 / -0.481 / NL
nuoJ / NADH:ubiquinone oxidoreductase subunit J / b2280 / 11.994 / 11.526 / 11.760 / 0.468 / 0.234 / -0.234 / NL
nuoK / NADH:ubiquinone oxidoreductase subunit K / b2279 / 11.972 / 11.206 / 11.666 / 0.766 / 0.460 / -0.306 / NL
nuoL / NADH:ubiquinone oxidoreductase subunit L / b2278 / 12.307 / 11.996 / 12.074 / 0.311 / 0.078 / -0.233 / NL
nuoN / NADH:ubiquinone oxidoreductase subunit N / b2276 / 11.804 / 11.678 / 11.468 / 0.126 / -0.210 / -0.336 / AH
nupG / Transport of nucleosides / b2964 / 8.696 / 9.256 / 8.506 / -0.561 / -0.751 / -0.190 / BL
ompF / Outer membrane porin protein 1a / b0929 / 10.459 / 13.294 / 12.401 / -2.834 / -0.892 / 1.942 / AL
ompR / Response regulator for osmoregulation / b3405 / 10.762 / 10.156 / 10.459 / 0.605 / 0.303 / -0.302 / NL
ompT / Outer membrane protease VII / b0565 / 12.438 / 13.253 / 12.049 / -0.815 / -1.204 / -0.389 / BL
ompX / Outer membrane protein / b0814 / 13.547 / 12.025 / 12.464 / 1.523 / 0.439 / -1.083 / NL
oppA / Oligopeptide permease / b1243 / 11.177 / 9.819 / 10.224 / 1.358 / 0.406 / -0.953 / NL
oppB / Oligopeptide transport / b1244 / 10.860 / 9.340 / 9.798 / 1.519 / 0.457 / -1.062 / NL
oppC / Oligopeptide transport / b1245 / 11.161 / 10.138 / 10.458 / 1.024 / 0.320 / -0.703 / NL
oppD / Oligopeptide transport / b1246 / 10.879 / 9.726 / 10.205 / 1.153 / 0.479 / -0.674 / NL
oppF / Oligopeptide transport / b1247 / 10.574 / 9.269 / 9.833 / 1.305 / 0.564 / -0.741 / NL
osmB / OsmB lipoprotein / b1283 / 8.863 / 8.579 / 9.468 / 0.284 / 0.889 / 0.606 / BH
pal / Lipoprotein associated with peptidoglycan / b0741 / 12.603 / 12.070 / 12.450 / 0.532 / 0.379 / -0.153 / NL
pdhR / Pyruvate dehydrogenase operon (pdhR-aceEF-lpd) repressor / b0113 / 10.570 / 9.815 / 9.706 / 0.755 / -0.109 / -0.863 / AH
pdxH / Pyridoxine/pyridoxamine phosphate oxidase; / b1638 / 10.808 / 9.595 / 9.815 / 1.213 / 0.220 / -0.992 / NL
pdxK / B6-vitamer kinase / b4218 / 9.104 / 9.092 / 8.301 / 0.012 / -0.791 / -0.803 / BL
pdxY / Pyridoxal kinase / b1636 / 10.833 / 10.047 / 10.007 / 0.786 / -0.040 / -0.826 / AH
pepB / Peptidase B / b2523 / 11.057 / 10.681 / 10.812 / 0.376 / 0.130 / -0.246 / NL
pepN / Aminopeptidase N / b0932 / 11.013 / 10.342 / 10.460 / 0.671 / 0.118 / -0.553 / NL
pepP / Proline (X-Pro) aminopeptidase / b2908 / 10.860 / 10.363 / 10.648 / 0.496 / 0.285 / -0.212 / NL
pfkB / 6-phosphofructokinase-2 / b1723 / 10.136 / 9.774 / 9.868 / 0.363 / 0.095 / -0.268 / NL
pflA / Pyruvate formate lyase I activase / b0902 / 9.573 / 8.608 / 9.276 / 0.964 / 0.667 / -0.297 / NL
pflB / Pyruvate formate lyase I / b0903 / 12.021 / 11.210 / 11.788 / 0.812 / 0.578 / -0.234 / NL
pflC / Putative pyruvate formate lyase II activase / b3952 / 8.828 / 9.3472 / 8.853 / -0.519 / -0.494 / 0.025 / NH
pgi / Glucosephosphate isomerase / b4025 / 11.292 / 10.638 / 10.815 / 0.654 / 0.177 / -0.477 / NL
pheA / chorismate mutase and prephenate dehydratase / b2599 / 9.305 / 9.8134 / 9.516 / -0.509 / -0.297 / 0.211 / NH
pheM / pheST operon regulatory leader peptide / b1715 / 8.144 / 6.716 / 7.400 / 1.428 / 0.685 / -0.743 / NL
phnA(yjdM) / Function unknown / b4108 / 10.058 / 10.718 / 11.072 / -0.660 / 0.354 / 1.014 / AL
phoB / Positive response regulator for pho regulon / b0399 / 9.508 / 10.337 / 9.674 / -0.828 / -0.662 / 0.166 / NH
phoU / high-affinity P-specific transport system / b3724 / 9.833 / 10.554 / 10.120 / -0.721 / -0.434 / 0.287 / NH
pinO(pioO) / Part of gsp divergon involved in type II protein secretion / b3322 / 8.458 / 9.0792 / 8.449 / -0.621 / -0.630 / -0.009 / NH
pitA / Low-affinity Pi transport protein / b4393 / 10.046 / 10.752 / 11.319 / -0.707 / 0.567 / 1.273 / AL
pmrD / Polymyxin B resistance / b2259 / 10 / 10.876 / 10.480 / -0.877 / -0.396 / 0.481 / NH
pncB / Nicotinate phosphoribosyltransferase / b0931 / 10.244 / 9.641 / 9.911 / 0.603 / 0.270 / -0.333 / NL
pntA / Nicotinamide nucleotide transhydrogenase / b1603 / 10.559 / 11.161 / 11.138 / -0.601 / -0.023 / 0.578 / AL
potD / Spermidine-binding membrane protein / b1123 / 10.911 / 10.858 / 11.367 / 0.053 / 0.509 / 0.456 / BH
ppiA / peptidylprolyl-cis-trans-isomerase A / b3363 / 10.555 / 11.081 / 11.312 / -0.526 / 0.231 / 0.757 / AL
pppA / Prepilin protein peptidase / b2972 / 8.673 / 10.250 / 10.126 / -1.577 / -0.124 / 1.453 / AL
pps (ppsA) / Phosphoenolpyruvate synthase / b1702 / 11.744 / 10.517 / 11.103 / 1.227 / 0.586 / -0.640 / NL
ppx / Exopolyphosphatase / b2502 / 9.814 / 9.254 / 9.349 / 0.560 / 0.095 / -0.465 / NL
prlC / Oligopeptidase A / b3498 / 10.149 / 10.803 / 9.933 / -0.653 / -0.870 / -0.216 / BL
proC / Pyrroline-5-carboxylate reductase / b0386 / 10.172 / 9.824 / 9.826 / 0.348 / 0.002 / -0.346 / NL
proP / Proline/betaine permease / b4111 / 11.357 / 10.567 / 9.878 / 0.790 / -0.689 / -1.479 / AH
proV / High-affinity transport for glycine / b2677 / 10.664 / 10.973 / 11.429 / -0.309 / 0.456 / 0.764 / AL
prs (prsA) / Phosphoribosylpyrophosphate synthase / b1207 / 11.282 / 10.835 / 11.731 / 0.447 / 0.896 / 0.449 / BH
psiF / pho regulon member / b0384 / 8.41 / 8.9754 / 8.520 / -0.566 / -0.455 / 0.111 / NH
pstA / Phosphate transport / b3726 / 9.976 / 11.065 / 10.078 / -1.090 / -0.988 / 0.102 / NH
pstB / Phosphate transport / b3725 / 10.9 / 11.962 / 11.075 / -1.061 / -0.887 / 0.173 / NH
pstC / Phosphate transport, inner membrane permease / b3727 / 9.2 / 10.692 / 9.237 / -1.491 / -1.455 / 0.037 / NH
pstS / periplasmic phosphate binding protein / b3728 / 9.134 / 11.613 / 9.352 / -2.479 / -2.262 / 0.217 / NH
pta / Phosphotransacetylase / b2297 / 10.702 / 9.535 / 10.174 / 1.167 / 0.639 / -0.528 / NL
ptsG / Glucose phophotransferase / b1101 / 10.506 / 9.665 / 10.219 / 0.841 / 0.554 / -0.287 / NL
ptsH / PTS system histidine phosphocarrier protein Hpr / b2415 / 12.311 / 11.942 / 12.506 / 0.369 / 0.564 / 0.195 / NL
ptsI / Phosphotransferase system enzyme I / b2416 / 12.211 / 11.970 / 12.308 / 0.241 / 0.339 / 0.098 / NL
ptsO / NPr, N-regulated HPr-like protein / b3206 / 9.968 / 9.330 / 9.498 / 0.639 / 0.168 / -0.470 / NL
purA / Adenylosuccinate synthase / b4177 / 11.009 / 11.045 / 11.822 / -0.037 / 0.777 / 0.814 / BH
purC / Phosphoribosylaminoimidazole-succinocarboxamide synthase / b2476 / 9.890 / 9.858 / 10.373 / 0.033 / 0.515 / 0.483 / BH
purD / Phosphoribosylamine-glycine ligase / b4005 / 9.483 / 9.958 / 9.979 / -0.475 / 0.021 / 0.497 / AL
purH / Phosphoribosylaminoimidazolecarboxamide formyltransferase / b4006 / 8.251 / 8.165 / 9.374 / 0.085 / 1.208 / 1.123 / BH
purK / Phosphoribosylaminoimidazole carboxylase / b0522 / 9.342 / 9.380 / 9.745 / -0.038 / 0.365 / 0.403 / BH
purL / Phosphoribosylformylglycinamide synthase / b2557 / 8.125 / 8.582 / 9.097 / -0.457 / 0.514 / 0.971 / AL
purM / Phosphoribosyl-aminoimidazole (AIR) synthase / b4299 / 8.888 / 8.895 / 10.020 / -0.007 / 1.125 / 1.132 / BH
purN / Glycinamide ribonucleotide transformylase (GART) 1 / b2500 / 10.459 / 10.633 / 10.894 / -0.174 / 0.261 / 0.435 / AL
purU / Formyltetrahydrofolate hydrolase / b1232 / 10.614 / 10.058 / 10.214 / 0.556 / 0.156 / -0.401 / NL
putA / Proline dehydrogenase / b1014 / 9.605 / 10.666 / 10.313 / -1.062 / -0.353 / 0.708 / AL
pyrB / Aspartate transcarbamylase / b4245 / 9.195 / 9.062 / 9.670 / 0.133 / 0.608 / 0.475 / BH
pyrC / Dihydro-orotase / b1062 / 9.364 / 8.306 / 10.036 / 1.058 / 1.730 / 0.672 / BH
pyrG / CTP synthase / b2780 / 11.872 / 11.250 / 11.713 / 0.622 / 0.464 / -0.158 / NL
pyrL / pyrBI operon regulatory leader peptide / b4246 / 6.043 / 5.801 / 7.026 / 0.242 / 1.225 / 0.983 / BH
rbsA / D-ribose high-affinity transport system / b3749 / 10.011 / 8.669 / 8.616 / 1.342 / -0.053 / -1.395 / AH
rbsB / D-ribose binding protein / b3751 / 11.771 / 12.520 / 11.370 / -0.749 / -1.150 / -0.401 / BL
rbsC / D-ribose high-affinity transport system / b3750 / 10.608 / 10.095 / 9.229 / 0.513 / -0.866 / -1.379 / AH
rbsD / Putative cytoplasmic sugar-binding protein / b3748 / 12.092 / 12.307 / 10.987 / -0.214 / -1.319 / -1.105 / BL
rbsK / Ribokinase / b3752 / 10.811 / 10.837 / 10.488 / -0.026 / -0.349 / -0.323 / BL
rcsA / Positive regulatory gene for capsule synthesis / b1591 / 8.968 / 8.037 / 7.883 / 0.930 / -0.154 / -1.084 / AH
rcsB / Positive regulatory gene for capsule synthesis / b2217 / 11.380 / 10.982 / 11.215 / 0.399 / 0.233 / -0.165 / NL
rdoA (yihE) / Function unknown / b3859 / 10.456 / 10.796 / 11.702 / -0.339 / 0.906 / 1.246 / BH
recA / General recombination and DNA repair / b2699 / 11.203 / 10.913 / 11.444 / 0.290 / 0.531 / 0.241 / BH
recR / Recombination and DNA repair / b0472 / 11.595 / 12.010 / 11.967 / -0.415 / -0.043 / 0.371 / AL
relA / ATP:GTP 3'-pyrophosphotransferase / b2784 / 9.796 / 9.277 / 9.555 / 0.519 / 0.277 / -0.241 / NL
rfbC / dTDP-4-deoxyrhamnose-3,5-epimerase / b2038 / 10.621 / 9.868 / 10.837 / 0.753 / 0.969 / 0.216 / NL
rfbD / dTDP-L-rhamnose synthase / b2040 / 11.147 / 10.810 / 11.355 / 0.337 / 0.545 / 0.208 / NL
rfe / UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-P transferase / b3784 / 10.277 / 9.711 / 10.042 / 0.566 / 0.331 / -0.235 / NL
rhlB / ATP-dependent RNA helicase / b3780 / 11.095 / 10.546 / 11.248 / 0.550 / 0.703 / 0.153 / NL
rho (sun) / Transcription termination factor Rho / b3289 / 10.660 / 9.984 / 10.233 / 0.677 / 0.249 / -0.428 / NL
ribA / GTP cyclohydrolase II / b1277 / 10.524 / 10.062 / 10.394 / 0.462 / 0.332 / -0.130 / NL
rimI / Modification of 30S ribosomal subunit protein S18 / b4373 / 11.082 / 10.803 / 10.608 / 0.278 / -0.195 / -0.474 / AH
rmf / Ribosome modulation factor / b0953 / 9.834 / 8.677 / 10.043 / 1.157 / 1.366 / 0.209 / NL
rnb / RNase II / b1286 / 10.610 / 10.109 / 10.585 / 0.501 / 0.476 / -0.025 / NL
rne / RNase E / b1084 / 10.82 / 11.657 / 11.320 / -0.833 / -0.337 / 0.496 / NH
rnk / Regulator nucleoside-diP kinase / b0610 / 9.795 / 9.789 / 10.846 / 0.007 / 1.058 / 1.051 / BH
rnt / RNase T / b1652 / 10.434 / 9.691 / 10.010 / 0.743 / 0.319 / -0.424 / NL
rpiA / Ribose-5-phosphate isomerase A / b2914 / 10.620 / 10.441 / 10.804 / 0.180 / 0.364 / 0.184 / BH
rpoE / RNAP sigma E envelope heat stress / b2573 / 11.386 / 11.076 / 10.648 / 0.310 / -0.427 / -0.738 / AH
rpoH / RNAP sigma 32 heat shock / b4361 / 10.387 / 10.764 / 10.849 / -0.378 / 0.084 / 0.462 / AL
rsd (yjaE) / Stationary phase protein, binds major sigma-subunit / b3995 / 9.007 / 8.708 / 9.136 / 0.298 / 0.427 / 0.129 / NL
rseA / Anti-RpoE sigma factor / b2572 / 11.781 / 11.362 / 11.203 / 0.419 / -0.159 / -0.578 / AH
rseB / enhances RpoE-RseA cytoplasmic complex formation / b2571 / 10.740 / 10.109 / 10.004 / 0.631 / -0.105 / -0.736 / AH
rsuA / 16S RNA pseudouridine 516 synthase / b2183 / 10.561 / 9.946 / 10.173 / 0.615 / 0.227 / -0.388 / NL
rzpD (ybcT) / Homolog to lambda Rz gene in prophage DLP12 / b0556 / 5.958 / 6.685 / 7.025 / -0.728 / 0.340 / 1.067 / AL
sdaA / L-Serine deaminase / b1814 / 9.415 / 9.824 / 10.462 / -0.409 / 0.638 / 1.048 / BH
sdaB / L-Serine deaminase, L-SD2 / b2797 / 10.543 / 11.654 / 11.221 / -1.111 / -0.434 / 0.678 / AL
sdaC / H+/serine symporter; regulator of L-SD2 / b2796 / 11.864 / 13.069 / 12.658 / -1.205 / -0.410 / 0.794 / AL
sdhA / Succinate dehydrogenase / b0723 / 13.100 / 11.662 / 11.643 / 1.438 / -0.019 / -1.458 / AH
sdhB / Succinate dehydrogenase / b0724 / 12.258 / 10.425 / 10.754 / 1.833 / 0.329 / -1.505 / AH
sdhC / Succinate dehydrogenase / b0721 / 12.464 / 9.736 / 10.626 / 2.728 / 0.890 / -1.838 / NL
sdhD / Succinate dehydrogenase / b0722 / 12.602 / 10.253 / 10.848 / 2.349 / 0.595 / -1.754 / NL
secD / SecDFyajC secretion trimeric complex / b0408 / 10.859 / 11.024 / 11.312 / -0.165 / 0.287 / 0.452 / AL
serC / Phosphoserine aminotransferase / b0907 / 10.212 / 9.647 / 9.820 / 0.565 / 0.173 / -0.392 / NL
serU / Serine tRNA2 / b1975 / 10.515 / 10.629 / 10.930 / -0.113 / 0.301 / 0.415 / BH
serV / Serine tRNA3 / b2695 / 12.461 / 12.065 / 12.047 / 0.396 / -0.018 / -0.413 / AH
sfa (ymcE) / function unknown / b0991 / 8.614 / 8.652 / 8.143 / -0.038 / -0.509 / -0.471 / BL
sfcA / Putative malic enzyme / b1479 / 10.786 / 10.422 / 10.361 / 0.364 / -0.061 / -0.425 / AH
sfsB (nlp) / Ner-like regulatory protein / b3188 / 8.590 / 7.836 / 8.011 / 0.754 / 0.175 / -0.579 / NL
sirA (yhhP) / Required for cell growth; affects sigma S stability / b3470 / 10.309 / 9.805 / 9.604 / 0.504 / -0.202 / -0.705 / AH
slt / Soluble lytic murein transglycosylase / b4392 / 8.105 / 8.515 / 9.076 / -0.410 / 0.561 / 0.970 / BH
sodB / Superoxide dismutase / b1656 / 12.568 / 11.816 / 12.097 / 0.752 / 0.280 / -0.472 / NL