ZARA AMANDA SANDS
PERSONAL DETAILS
Address:9 Stewart StreetPhone:+44 (0) 1865 453768 (home)
Oxford+44 (0) 1865 275273 (work)
UK
OX1 4RHE-mail:
Date of Birth:29th March 1975Nationality:British
ACADEMIC PURSUITS & ACHIEVEMENTS
2003-PresentUniversity of Oxford
Post-DoctoralResearch Associate funded by the Wellcome Trust
- The primary goal of my research project is to understand the processes that govern the gating of voltage-dependent ion channels. This is hoped to be achieved through the application of molecular modelling and molecular dynamics methods
- Supervisor: Prof. M. S. P. Sansom
2000-2003 University of Nottingham
Ph.D. studies in Computational Chemistry
- Title: In silico screening for gene targeting agents
- Supervisors: Prof. D. E. Thurston and Dr. C. A. Laughton
- Projects: Molecular Dynamic investigations probing the origins of DNA recognition by molecules ranging from small ligands (e.g. lexitropins) to large proteins (e.g. RecA); Detailed investigative studies evaluating the performance of the generalised Born continuum model as applied to MD simulations of DNA systems; Development and implementation of novel molecular descriptors to rapidly evaluate the isohelical and recognition attributes of large virtual compound libraries against gene targets; Design of compound libraries against selected DNA sequences.
- I conceptualized and developed SeleXagent, a virtual high throughput screening method that is currently being filed for patent by the University of Nottingham
- Awarded 1st place prize at the University of Nottingham 2002 postgraduate poster symposium
- Received runners up prize for poster presented at the 2001 MGMS international meeting
1994-1997University of Manchester
B.Sc. (Hons) Chemistry, First Class
- Specialist subjects: Synthetic organic chemistry, mechanistic organic chemistry, medicinal chemistry and inorganic chemistry
- Glaxo prize for 'the best theoretical and practical organic chemist’ graduating in 1997
- University of Manchester Scholarship for 2nd year examination performance
- University of Manchester Scholarship for 1st year examination performance
- Final year project entitled 'Herbicidin Glycoside Synthesis' (Dr. P. Quayle)
1986-1993St John Fisher RC High School, Dewsbury, West Yorkshire
- 3 A-levels: Chemistry (A); Biology (A); Physics (B)
- 9 GCSE's: 6 Grade 'A'; 3 Grade 'C'
PUBLICATIONS
- Sands, Z. A., Laughton, C. A. In silico screening for gene targeting agents. (2003) Patent No. 0322700.6
- Sands, Z. A., Laughton, C. A. Molecular Dynamics of DNA Using the Generalised Born Solvation Model. J. Phys. Chem. B. (2004) 108, 10113-10119
- Harris, S. A., Sands, Z. A., Laughton, C. A. Theoretical evidence for the importance of entropy in determining the biomechanical properties of DNA. Biophys. J. Accepted for publication
RESEARCH EXPERIENCE
Consultation for the University of Nottingham
- Prior to commencingmy current position, I was employed by the University of Nottingham to further develop SeleXagent technology for market release
Consultation for Spirogen Ltd
- During the second and third year of my PhD, Spirogen Ltd sought my advice on the design and development of targeted libraries against selected genes. Due to a strong background in organic chemistry, my creative suggestions were not only considered by the medicinal chemists, but realized
Supervision of final year projects
- Throughout my Ph.D. I was responsible for final year B.Sc. students. In each case this involved: assisting in project management, development and completion
Tutoring undergraduate general chemistry classes
- Duties involved: group coordination and motivation; facilitating communication; simplification of complex theories and methods
KEY SKILLS
Computational
- Programming experience in C, Fortran, and HTML code
- Extensive use of AMBER and Gromacs modelling packages
- Modelling software: MOLDEN, ISIS Draw, ChemDraw, MIDAS, Insight and WHATIF
- Familiarity with Gaussian 98 theoretical computational package
- Implementation and familiarity of Daylights chemoinformatic packages
- Extensive use of several UNIX, MS and Linux operating systems
- Web page design and development
Communication
- Presented research findings at conferences and industrial meetings in written, poster and oral form.
INTERESTS
- My hobbies include: mountaineering, canoeing, cycling, skiing and scuba-diving
- I thoroughly enjoy travel and have toured the USA and Europe on several occasions