Brassica REFERENCES PLS 221/Spring 2010
C. F. Quiros
Alix, Karine; Ryder, Carol D.; Moore, Jay, et al. (2005) The genomic organization of retrotransposons in Brassica oleracea Plant Mol Biol 59:839-851
Alix K et al. 2008 The CACTA transposon Bot1 played a major role in Brassica genome divergence and gene proliferation Plant J 56:1030-1044.
Allender, CJ, Allainguillaume, J, Lynn, J, King, GJ (2007) Simple sequence repeats reveal uneven distribution of genetic diversity in chloroplast genomes of Brassica oleracea L. and (n=9) wild relatives. Theor Appl Genet 114:609-618
http://www.springerlink.com/content/l7318616240x04j9/fulltext.pdf
Arumuganathan K & Earle ED (1991) Nuclear DNA content of some important plant species. Plant Molec Rpt 9:208-219
Arus P et al. (1982) Electrophoretic variation as a tool for determining seed purity and for breeding hybrid varieties of Brassica oleracea. Euphytica 31:417-428
Arus P & Orton T (1983) Inheritance and linkage relationships of isozyme loci in Brassica oleracea. J Hered 74:405-412
Attia T, Busso C & Robbelen G (1987) Digenomic triploids for an assessment of chromosome relationships in the cultivated diploid Brassica species. Genome 29:326-330
Babula, D, Kaczmarek, M, Barakat, A, Delseny M, Quiros, CF, Sadowski, J (2003) Chromosomal mapping of Brassica oleracea based on ESTs from Arabidopsis thaliana: complexity of the comparative map. Mol Gen Genomics 268: 656-665
http://www.springerlink.com/content/dnplt65a5e5ypa4t/fulltext.pdf
Banga SS (1988) C-genome chromosome substitution lines in Brassica juncea (L.) Coss. Genetica 77:81-84
Bauer R (1990) Protoplast manipulation in the genus Brassica. Biol Zeng bl 109:63-69
Bonhomme S et al. (1991) A 2.5 kb NcoI fragment of Ogura radish mitochondrial DNA is correlated with cytoplasmic male-sterility in Brassica cybrids. Curr Genet 19:121-127
Bouhon EJR, Keith DJ, Parkin IAP, Sharpe AG & Lydiate D (1996) Alignment of conserved C genomes of Brassica oleracea and B. napus. Theor Appl Genet 93:833-839
Boyes DC et al. (1991) Isolation of a second S-locus-related cDNA from Brassica oleracea: genetic relationships between the S locus and two related loci. Genetics 127:221-228
Brace J, Ockendon DJ & King GJ (1993) Development of a method for the identification of S-alleles in Brassica oleracea based on digestion of PCR-amplified DNA with restriction endonucleases. Sexual Plant Reproduction 6:133-138
Brown, G.G., Formanova, N., Jin, H., Wargachuk, R., Dendy, C., Patil, P., Laforest, M., Zhang, J., Cheung, W.Y. & Landry, B.S. (2005) The radish Rfo restorer gene of Ogura cytoplasmic male sterility encodes a protein with multiple pentatricopeptide repeats. Plant Journal 35:262-72
Brunel, D., Froger, N. and Pelletier, G. (1999) Development of amplifi ed consensus genetic markers (ACGM) in Brassica napus from Arabidopsis thaliana sequences of known
biological function Genome 42: 387-402
Budahn H et al 2007. Development of a complete set of disomic rape-radish chromosome-addition lines Euphytica 162:117-28.
Cabrillac, d. et al. (2001) The S-locus receptor kinase is inhibited by thioredoxins and activated by pollen coat proteins. Nature 410:220-223
Camargo LEA, Williams PH & Osborn TC (1995) Mapping of quantitative trait loci controlling resistance of Brassica oleracea to Xanthomonas campestris pv campestris in the field and greenhouse. Phytopath 85:1296-1300
Camargo LEA & Osborn (1996) Mapping loci controlling flowering time in Brassica oleracea. Theor Appl Genet 92:610-616
Campos de Quiros H & Mithen R (1996) Molecular markers for low-glucosinolate alleles in oilseed rape (Brassica napus L). Mol Breed 2:277-281
http://www.springerlink.com/content/k75482w0371q3575/fulltext.pdf
Cao, J, Shelton, AM, Earle, ED (2008) Sequential transformation to pyramid two BT genes in vegetable Indian mustard (Brassica juncea L.) and its potential for control of diamondback moth larvae. Plant Cell Rep 27:479-487
http://www.springerlink.com/content/817515m106777754/fulltext.pdf
Cardi, T and Earle, ED (1997) Production of new CMS Brassica oleracea by transfer of `Anand' cytoplasm from B. rapa through protoplast fusion, Theor Appl Genet (1997) 94:204-212
http://www.springerlink.com/media/3ajgwhlrxnu2jryxvcby/contributions/w/m/v/a/wmvawvhhrum86mna.pdf
Cavell, AC, Lydiate, DJ, Parkin, IAP, Dean, C, Trick, M (1998) Collinearity between a 30-centimorgan segment of Arabidopsis thaliana chromosome 4 and duplicated regions
within the Brassica napus genome. Genome 41:62-69
Cao, J. S.; Yu, X. L.; Ye, W. Z., et al. (2006) Functional analysis of a novel male fertility CYP86MF gene in Chinese cabbage (Brassica campestris L. ssp chinensis makino)
Plant Cell Reports 24:715-723
Catcheside DG (1934) The chromosomal relationship in the swede and turnip groups Brassica. Ann Bot Lond 601:33-56
Chang RY et al. (1987) Cytogenetic studies of aneuploids in rapeseed. II. Morphology, fertility, and cytology of self-pollinated progenies of monosomic plants of Brassica napus. Genome 29:174-179
Chen BY (1988) Resynthesis of Brassica napus through interspecific hybridization between B. alboglabra and B. campestris. Plant Breeding 101:52-59
Chen JL & Beversdorf WD (1990) A comparison of traditional and haploid-derived breeding populations of oilseed rape Brassica napus L. for fatty acid composition of the seed oil. Euphytica 51:59-65
Chen ZZ, Snyder S, Fan ZG & Loh WH (1994) Efficient production of doubled haploid plants through chromosome doubling of isolated microspores in Brassica napus. Plant Breeding 113:217-221
Cheng BF, Heneen WK & Chen BY (1994) Meiotic studies of a Brassica campestris alboglabra monosomic addition line and derived B. campestris primary trisomics . Genome 37:584-589
Chetrit P (1985) Mitochondrial DNA polymorphism induced by protoplast fusion in Cruciferae. Theor Appl Genet 69:361-366
Cheung WY, Champagne G, Hubert N & Landry BS (1997a) Comparison of the genetic maps of Brassica napus and Brassica oleracea. Theor Appl Genet 94:569-582
http://www.springerlink.com/content/0jbawdfp3e1yty8b/fulltext.pdf
Cheung WY, Friesen L, Rakow GFW, Seguin-Swartz G & Landry BS (1997b) A RFLP-based linkage map of mustard [Brassica juncea (L) Czern and Coss] Theor Appl Genet 94:841-851
Chevre AM, This P, Eber F, Renard M, Delseny M. & Quiros CF (1991) Characterization of disomic addition lines of Brassica napusBrassica nigra by isozyme, fatty acids and RFLP markers. Theor Appl Genet 81:43-49
http://www.springerlink.com/content/u03165427p37212j/fulltext.pdf
Chiang MS & Crete R (1983) Transfer of resistance to race 2 Plasmodiophora from B. napus to cabbage. Euphytica 32:479-483
Chookajorn, Thanat; Kachroo, Aardra; Ripoll, Daniel R., et al. (2004) Specificity determinants and diversification of the Brassica self-incompatibility pollen ligand. Proc Natl Acad Sci 101:911-917
Chyi Y S, Hoenecke M & Sernyk L (1992) A genetic linkage map of restriction fragment length polymorphism loci for Brassica rapa (syn. campestris). Genome 35:746-757
Conner, J. A et al. (1998) Comparative homology of the Brassica S locus region and its homeolog in Arabidopsis. The Plant Cell 10:801-812
Cui et al. (2000) The S locus glycoprotein and S receptor kinase are sufficient for self rejection in Brassica. Proc Natl Acad Sci 97:3713-3717
Delourme, R., Foisset, N., Horvais, R., Barret, P., Champagne, G., Cheung, W.Y., Landry, B.S. and Renard, M (1998) Characterisation of the radish introgression carrying the Rfo restorer gene for the Ogu-INRA cytoplasmic male sterility in rapeseed (Brassica napus L.). Theor Appl Genet 97:129-134
Delourme, R. and F. Budar (1999). Male sterility. In: The Biology of Brassica Coenospecies, by Gomez-Campo (ed). Elsevier.
Delseny M et al. (1990) Ribosomal RNA genes in diploid and amphidiploid Brassica and related species: organization, polymorphism and evolution. Genome 33:733-744
Deslauriers C et al. (1991) Flow cytometric characterization and sorting of cultured Brassica napus microspores. Biochem Biophys Acta 1091:165-172
Desloire et al. (2003) Identification of the fertility restoration locus Rfo in radish as a member of the pentatricopeptide-repeat protein family. EMBO Rep 4:588-94
Dion Y, Gugel RK, Rakow GF, Seguin-Swartz G & Landry BS (1995) RFLP mapping of resistance to the blackleg disease [causal agent, Leptosphaeria maculans(Desm)]Cas et de Not] in canola (Brassica napus L) Theor Appl Genet 91:1190-1194
Duclos DV and T Bjorkman 2008. Meristem identity gene expression during curd proliferation and flower initiation in B. oleracea. J. Exp. Bot 59:421-33.
Duroc, Yann; Gaillard, Catherine; Hiard, Sophie, et al. (2005) Biochemical and functional characterization of ORF138, a mitochondrial protein responsible for Ogura cytoplasmic male sterility in Brassiceae Biochimie (Paris) 87:1089-1100
Dwyer KG et al. (1989) The Brassica self-incompatibility multigene family. Genome 31:969-972
Dwyer KG et al. (1991) DNA sequences of self-incompatibility genes from Brassica campestris and B. oleracea: polymorphism predating speciation. Plant Molec Biol 16:481-486
Earle ED, Temple M & Walters TW (1992) Organelle assortment and mitochondrial DNA rearrangements in Brassica somatic hybrids and cybrids. Physiologia Plantarum 85:325-333
Ecke W, Uzunova M & Weissleder K (1995). Mapping the genome of rapeseed (Brassica napus L) 2. Localization of genes controlling erucic acid synthesis and seed oil content. Theor Appl Genet 91:972-977
Edh K et al. 2009. The evolution and diversification of S-locus haplotypes in the Brassicaceae family. Genetics 181:977-84.
Erickson LR, Straus NA & Beversdorf WD (1983) Restriction patterns reveal origins of chloroplast genomes in Brassica amphiploids. Theor Appl Genet 65:201-206
Erickson L, Grant I & Beversdorf WD (1986) Cytoplasmic male sterility in rapeseed. Theor Appl Genet 72:145-157
Fahey, J.W., Zhang, Y. and Talalay, P. (1997) Broccoli sprouts: An exceptionally rich source
of inducers of enzymes that protect against chemical carcinogens Proc Natl Acad Sci
94:10367-10372
Fan Z & Tai W (1985) A cytogenetic study of monosomics in B. napus. Can J Gen Cytol 27:683-688
Farnham, MW, Wilson, PE, Stephenson, MK, Fahey, JW (2004) Genetic and environmental effects on glucosinolate content and chemoprotective potency of broccoli. Plant Breeding 123:60-65
http://www.blackwell-synergy.com/doi/pdf/10.1046/j.0179-9541.2003.00912.x
Feng H et al 2009. SSR and SCAR mapping of a multiple-allele male-sterile gene in Chinese cabbage (Brassica rapa L.) TAG 119:333-339.
Ferreira ME, Williams PH & Osborn TC (1994) RFLP mapping of Brassica using doubled haploid lines. Theor Appl Genet 89:615-621
Ferreira ME, Satagopan J, Yandell BS, Williams PH & Osborn TC (1995a) Mapping loci controlling vernalization requirement and flowering time in Brassica napus. Theor Appl Genet 90:727-732
Ferreira ME, Rimmer SR, Williams PH & Osborn TC (1995b) Mapping loci controlling Brassica napus resistance to Leptosphaeria maculans under different screening conditions. Phytopath 85:213-217
Ferreira ME, Williams PH & Osborn TC (1995c) Mapping of a locus controlling resistance to Albugo candida in Brassica napus using molecular markers. Phytopath 85:218-220
Figdore SS et al. (1988) Assessment of the degree of restriction fragment length polymorphism in Brassica. Theor Appl Genet 75:833-840
Figdore SS, Ferriera ME, Slocum MK & Williams PH (1993) Association of RFLP markers with trait loci affecting clubroot resistance and morphological characters in Brassica oleracea L. Euphytica 69:33-44
Foisset N, Delourme R, Barret P, Hubert N, Landry BS & Renard M (1996) Molecular mapping analysis of Brassica napus using isozyme, RAPD and RFLP markers on double haploid progeny. Theor Appl Genet 93:1017-1025
Formanova N et al 2010 High resolution mapping of the B. napus Rfp restorer locus using A thaliana derived markers TAG 120:843-51.
Gaeta, RT, Pires, LC, Iniguez-Luy, F, Leon, E, Osborne, TC (2007) Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype. Plant Cell 19:3403-3417
http://www.plantcell.org/cgi/rapidpdf/tpc.107.054346v1
Gaeta RT et al 2009. Analysis of Gene Expression in Resynthesized Brassica napus Allopolyploids Using Arabidopsis 70mer Oligo Microarrays PLoS 4:
Gao, M, Li, G, McCombie, WR, Quiros, CF (2005) Comparative analysis of a transposon-rich Brassica oleracea BAC clone with its corresponding sequence in A. thaliana. Theor Appl Genet 111:949-955
http://www.springerlink.com/content/r10623678847271m/fulltext.pdf
Gao, M, Li, G, Potter, D, McCombie, WR, Quiros, CF (2006) Comparative analysis of methylthioalkylmalate synthase (MAM) gene family and flanking DNA sequences in Brassica oleracea and Arabidopsis thaliana. Plant Cell Rep 25:592-598
http://www.springerlink.com/content/f811n4jk7463k6p1/fulltext.pdf
Gao, M, Li, G, Yang, B, McCombie, WR, Quiros, CF (2004) Comparative analysis of a Brassica BAC clone containing several major aliphatic glucosinolate genes with its corresponding Arabidopsis sequence. Genome 47:666-679
http://article.pubs.nrc-cnrc.gc.ca/ppv/RPViewDoc?_handler_=HandleInitialGet&journal=gen&volume=47&calyLang=fra&articleFile=g04-021.pdf
Gao, M, Li, G, Yang, B, Qiu, D, Farnham, M, Quiros, C (2007) High-Density Brassica oleracea linkage map: identification of useful new linkages. Theor Appl Genet 115:277-287
http://www.springerlink.com/content/2288707k73322147/fulltext.pdf
Gaude, T. et al. (1993) Expression of a self-incompatibility gene in a self-compatible line of Brassica oleracea. The Plant Cell 5:75-86
Geddy, R., Mahe L. and Brown, G.G. (2005) Cell-specific regulation of a Brassica napus CMS-associated gene by a nuclear restorer with related effects on a floral homeotic gene promoter. Plant J. 41:333-345
Genet, T, Viljoen, CD, Labuschagne, MT (2005) Genetic analysis of Ethiopian mustard genotypes using amplified fragment length polymorphism (AFLP) markers African Journal of Biotechnology 4:891-897
Gland A et al. (1988) Genetic and exogenous factors affecting embryogenesis in isolated microspore cultures of Brassica napus. J Plant Physiol 132:613-617
Grandclement C, Laurent F & Thomas G (1996) Detection and analysis of QTLs based on RAPD markers for polygenic resistance to Plasmodiophora brassicae Woron in Brassica oleracea L. Theor Appl Genet 93:86-90
Gray AR (1982) Taxonomy and evolution of broccoli (Brassica oleracea var. italica). Econ Bot 36:397-410
Grelon M et al. (1994) Ogura cytoplasmic male-sterility (CMS)-associated orf138 is translated into a mitochondrial membrane polypeptide in male-sterile Brassica cybrids. Mol Gen Genet 243:540-547
Gomez-Campo, C. (1999) Biology of Brassica Coenospecies. Developments in Plant Genetics and Breeding, 4. Elsevier
Haga T (1938) Relationship of genome to secondary pairing in Brassica (a preliminary note). Jpn. J. Genet. 13:277-284
Hall et al. (2001) Biochemical genetics of glucosinolate modification in Arabidopsis and Brassica. Theor Appl Genet 102:369-374
http://www.springerlink.com/content/5ucbt7dtb6ddjfnv/fulltext.pdf
Hale, AL, Farnham, MW, Nzaramba, MN, Kimbeng, CA (2007) Heterosis for horticultural traits in Broccoli. Theor Appl Genet 115:351-360
http://www.springerlink.com/content/x03600h60jlqu577/fulltext.pdf
Halkier BA and J Gershenzon 2006. Biology and Biochemistry of glucosinolates. Ann. Rev. Plant Biol. 57:303-33.
Hanson M and Bentollila S (2004) Interactions of mitochondrial and nuclear genes affecting gametophyte development. The Plant Cell 16:S154
Harberd DJ (1972) A contribution to the cyto-taxonomy of Brassica (Cruciferae) and its allies. Bot J Linn Soc 65:1-23
Harrison GE & Heslop-Harrison (1995) Centromeric repetitive DNA sequences in the genus Brassica. Theor Appl Genet 90:157-165
Himelblau E et al 2009. Forward and reverse genetics of rapid-cycling B. oleracea. TAG 118:953-61
Hoffmann F, Thomas E & Wenzel G (1982) Anther culture as a breeding tool in rape. II. Progeny analysis of androgenic lines and induced mutants from haploid cultures. Theor Appl Genet 61:225-232
Hong, CP, Kwon, S, Kim, JS, Yang, T, Park, B, Lim, YP (2008) Progress in understanding and sequencing the genome of Brassica rapa. Intl J Plant Genomics 2008 Article ID 582837, 9 pages