Supplementary Table 1. Primers used in this study.
Primers / Sequence (5’-3’) / Product Size(bp) / Referencetdh-F / GTAAAGGTCTCTGACTTTTGGAC / 270 / Vongxay et al. (2006)
tdh-R / TGGAATAGAACCTTCATCTTCACC
trh-F / TTGGCTTCGATATTTTCAGTATCT / 486 / Vongxay et al. (2006)
trh-R / CATAACAAACATATGCCCATTTCCG
trh-1 / ATCCATACCTTTTCCTTCTCC / 285 / Vongxay et al. (2008)
trh-2 / TCTGATTTTGTGAAGACCGT
vcrD1-F / ACAACATCACGCGCTGCTTACCCCACTT / 408 / This study
vcrD1-R / ACTTCTCGCCCACGTTCGCCAATCAG
vcrD2-F / CGCAATAGAAAGCAACAAACGA / 244 / This study
vcrD2-R / GGCGAAGTTACGTAAATCATCAT
icmF1-F / AGTACCGCCTGCCAATAAGACAAC / 411 / This study
icmF1-R / GACGCATCGGCAAACTCAACAG
icmF2-F / TCAATGGCGCTATCGTAACAGTCA / 483 / This study
icmF2-R / GCAAGAAAACACCGCGAATAAGG
icmF1-A / AGAGCATGCCACAGATGAAGATGTG / This study
icmF1-B / ACAGGCTTTAACAATATAATAACCAGAATAGGCAG
icmF1-C / ATTGTTAAAGCCTGTAACTTCTTTACTTTTATTTATTG
icmF1-D / AGAGGATCCTCAAATCCTCCTTCA
icmF1-E / CAAGCATGCAAGGGAACAACTTAGG / 4855
1465(deleted)
icmF1-F / AGAGGATCCCGTCGTCCCCTAAAT
hcp1-A / AAAGGATCCGAATGGCTATGTTAGTGGGAAT / This study
hcp1-B / AAAGCAATCTGTTTTGTTTAAATCACCAAATCGCT
hcp1-C / AAAACAGATTGCTTTTTGCGTAAAGATTCA
hcp1-D / AAAGCATGCGGAAAATACGACAGTCTTGG
hcp1-E / GCGAGTGCTGCGGCATCTTCTAATG / 1514
1004(deleted)
hcp1-F / GTCACTGAACCATCATCAAGCACCTCT
icmF2-A / AAACTGCAGTTTGCTTCCTACCAACTCCACATT / This study
icmF2-B / CGGTTGGGCAAGGAACGCCTAAGTG
icmF2-C / TTCCTTGCCCAACCGTTAGTTGCCCAC
icmF2-D / GGAGGATCCTGCTCAGGTTTCGGAAC
icmF2-E / CCCATACCGTCAGCAACAACCCAT / 5027
1508(deleted)
icmF2-F / TCACATGGTCGCGGAGTACAGCAAGAG
hcp2-A / TTAGGATCCTTACTTCTTTACCCACGATTT / This study
hcp2-B / ATTAGCTTTATTGTGCGGAGGGGTTATCT
hcp2-C / CACAATAAAGCTAATCTCCTAGAGCATTATTA
hcp2-D / AAAGCATGCAAAGAAGTCCTAACGGA
hcp2-E / CTCCATTATGAGAATTCATCACTC / 1467
987(deleted)
hcp2-F / CACAGAAACCACAATGTCTCTCTATG
tdh-A / AAACTGCAGTGACGTAGAGTCTAATCCAT / This study
tdh-B / AAAAAAACCTCTGAATTGATTAATAACTTTGCCAG
tdh-C / TTCAGAGGTTTTTTTAAATAAAAAGCCACAGAATA
tdh-D / ACTGAATCCATATTTCCTCATCGTAA
tdh-E / AAGGTTATTTCTTTCCCCTAGCATC / 1793
1223(deleted)
tdh-F / TTTCGGCATGAGACTAGGGGAAT
vcrD1-A / AAAGGATCCTACCACGCAACACATCAAC / This study
vcrD1-B / TGAACGCAGCACTTGTACAATCGTTTGAAC
vcrD1-C / CAAGTGCTGCGTTCATATGTAAAGATTGCAGATA
vcrD1-D / AAAGCATGCTCGCACAGGAATCTGG
vcrD1-E / CAGTCGGCTTGTTGATCGTGGCTA / 2995
868(deleted)
vcrD1-F / CTGCTTCGTCCAGAAAAGTACCGCC
vcrD2-A / AAAGCATGCCTGACTAACTTTAAGAGTG / This study
vcrD2-B / ATGACTTTTAGGAGGATATGATGGCAGAAGAAT
vcrD2-C / CCTCCTAAAAGTCATATCGAGTCTAATCCTCTTTT
vcrD2-D / AAAGGATCCTGAGGAACAAGTGCTC
vcrD2-E / CCATCTTTAACCCCAACGATTCAG / 2764
880(deleted)
vcrD2-F / TTCGGAGTTAGCAACGTATCAGAAC
sacB-F / ACGGCACTGTCGCAAACTAT / 387bp / This study
sacB-R / TTCCGTCACCGTCAAAGAT
picmF1-F / GGGGAGCTCATGTTCAAACAAAAAATACTAAG / 3308bp / This study
picmF1-R / AAACCCGGGTCAAATCGACTCTGGGAG
picmF2-F / GGGGAGCTCATGAGTATTAAAGAAATAGGCAGAG / 3537bp / This study
picmF2-R / AAACCCGGGTTACAAGGTTTGCGGACATC
phcp1-F / AAAGAATTCATGCCAACTCCAGC / 528bp / This study
phcp1-R / AAAGAATTCATGCCAACTCCAGC
phcp2-F / CACGAATTCATGCAGTCTAATAC / 498bp / This study
phcp2-R / GAAGGATCCTTACATTTGTTGACCT
hcp1-F / AAAGGATCCATGCCAACTCCAGC / 528bp / This study
hcp1-R / AAACTCGAGTTATGCTTCGCGTGGA
hcp2-F / CACGGATCCATGCAGTCTAATAC / 498bp / This study
hcp2-R / GAACTCGAGTTACATTTGTTGACCT
QF-hcp1 / GGTGAAACTCAAGGTCACATTACTA / 136bp / This study
QR-hcp1 / TTTGTGGATCACGTGGAACAGT
QF-hcp2 / GGAGCAGAAGTGTTGTTTTTG / 129bp / This study
QR-hcp2 / TGATGCGATGATTTCTAACTACTC
QF-icmF1 / TGCCAAACAATGAGCGACGAG / 124bp / This study
QR-icmF1 / GAGCGATAAGCCGGATGTGGTAA
QF-icmF2 / TTGGTTTATAAGCACGGTCCTG / 133bp / This study
QR-icmF2 / TGCCCCATTCCCCTTCATAG