Bulgari et al. - Supplemental files for publication as Supplemental Information

Table S1.Operational Taxonomic Units (OTUs) identified in uninfected apple roots

OTU / Representative clone / Group / Family / GeneBank closest relative / % identity
1 / 1H47 / Alphaproteobacteria / Rhizobiaceae / Rhizobium giardinii (EU488750) / 99
2 / 1H91 / Bradirhizobiaceae / Uncultured Bradyrizobium sp. (HQ674794) / 99
3 / 1H90 / Caulobacteraceae / Uncultured Phenylobacterium (HM438573) / 96
4 / 1H70 / Sphingomonandaeae / Sphingomonas sp. (AB196253) / 98
5 / 1H58 / Uncultured soil bacterium (DQ297946) / 98
6 / 1H66 / Uncultured bacterium (GQ451197) / 98
7 / 1H84 / Uncultured bacterium (GQ128327) / 99
8 / 1H15 / Betaproteobacteria / Methylophilaceae / Methylovorus glucosetrophus (FR733702) / 98
9 / 1H54 / Comamonadaceae / Variovorax boronicumulans (AB300597) / 99
10 / 1H69 / Oxalobacteraceae / Massilia sp. (FR682709) / 99
11 / 1H95 / Herbaspirillum hiltneri (DQ150565) / 99
12 / 1H45 / Oxalobacteraceae bacterium (DQ337591) / 99
13 / 1H81 / Burkholderia incertae sedis / Methylibium sp. (AB609313) / 99
14 / 1H9 / Uncultured bacterium (AY917770) / 99
15 / 1H6 / Gammaproteobacteria / Pseudomonandaceae / Pseudomonas fluorescens (GU198113) / 99
16 / 1H63 / Sinobacteraceae / Steroidobacter sp. (AB548216) / 99
17 / 1H92 / Uncultured bacterium (GU391672) / 99
18 / 1H71 / Deltaproteobacteria / Haliangiaceae / Uncultured bacterium (EF492897) / 99
19 / 1H30 / Uncultured Myxococcales (EU440666) / 98
20 / 1H4 / Acidobacteria / Acidobacteriaceae / Uncultured Acidobacteria (HM061771) / 99
21 / 1H78 / Bacteroidetes / Chitinophagaceae / Uncultured bacterium (HQ323235) / 98
22 / 1H18 / Uncultured Niastella (FJ984473) / 99
23 / 1H75 / Sphingobacteriaceae / Mucilaginobacter sp. (HM204914) / 98
24 / 1H53 / Chlamydiae / Uncultured Chlamydiales bacterium (EU852559) / 94