Supplemental Table 1.Annotation of mitochondrial genomes of the 1c clade species of Phytophthora.
SpeciesP. infestansIba / P. phaseoli / P.
andina Ic / P.
andina Ia / P. ipomoeae / P. mirabilis / Location
Start / 26 / 26 / 26 / 26 / 26 / 24 / rnl
End / 2679 / 2679 / 2679 / 2679 / 2679 / 2677 / rnl
Start / 2686 / 2686 / 2686 / 2686 / 2686 / 2684 / trnN (guu)
End / 2757 / 2757 / 2757 / 2757 / 2757 / 2755 / trnN (guu)
Start / 2770 / 2770 / 2770 / 2770 / 2770 / 2768 / trnS (gcu)
End / 2858 / 2858 / 2858 / 2858 / 2858 / 2856 / trnS (gcu)
Start / 2879 / 2879 / 2879 / 2879 / 2879 / 2877 / trnM (cau)
End / 2950 / 2950 / 2950 / 2950 / 2950 / 2948 / trnM (cau)
Start / 2994 / 2994 / 2994 / 2994 / 2994 / 2992 / trnP (ugg)
End / 3068 / 3068 / 3068 / 3068 / 3068 / 3066 / trnP (ugg)
Start / 3082 / 3082 / 3082 / 3082 / 3082 / 3080 / trnM(caa)
End / 3153 / 3153 / 3153 / 3153 / 3153 / 3151 / trnM(caa)
Start / 3171 / 3171 / 3171 / 3171 / 3171 / 3169 / rpl14
End / 3542 / 3542 / 3542 / 3542 / 3542 / 3540 / rpl14
Start / 3549 / 3549 / 3549 / 3549 / 3549 / 3547 / rpl5
End / 4082 / 4082 / 4082 / 4082 / 4082 / 4080 / rpl5
Start / 4090 / 4090 / 4090 / 4090 / 4090 / 4088 / trnG (gcc)
End / 4161 / 4161 / 4161 / 4161 / 4161 / 4159 / trnG (gcc)
Start / 4253 / 4253 / 4253 / 4253 / 4253 / 4251 / trnG (ucc)
End / 4324 / 4324 / 4324 / 4324 / 4324 / 4322 / trnG (ucc)
Start / 4330 / 4330 / 4330 / 4330 / 4330 / 4328 / trnY (gua)
End / 4413 / 4413 / 4413 / 4413 / 4413 / 4411 / trnY (gua)
Start / 5199 / 5210 / 5194 / 5194 / 5187 / 5209 / rns
End / 6701 / 6712 / 6696 / 6696 / 6689 / 6711 / rns
Start / 6736 / 6747 / 6731 / 6731 / 6724 / 6746 / trnW (cca)
End / 6807 / 6818 / 6802 / 6802 / 6795 / 6817 / trnW (caa)
Start / 7002 / 7013 / 6983 / 6984 / 6988 / 7000 / orf79
End / 7241 / 7252 / 7210 / 7211 / 7227 / 7239 / orf79
Start / 7661 / 7651 / 7617 / 7618 / 7631 / 7596 / cox2
End / 8437 / 8427 / 8393 / 8394 / 8407 / 8372 / cox2
Species
P. infestans / P. phaseoli / P.
andina Ic / P.
andina Ia / P. ipomoeae / P. mirabilis / Location
Start / 8453 / 8443 / 8409 / 8410 / 8423 / 8388 / orf32
End / 8551 / 8541 / 8507 / 8508 / 8521 / 8486 / orf32
Start / 8639 / 8624 / 8591 / 8596 / 8605 / 8572 / cox1
End / 10117 / 10102 / 10069 / 10074 / 10083 / 10050 / cox1
Start / 10266 / 10248 / 10215 / 10222 / 10230 / 10198 / atp9
End / 10493 / 10475 / 10442 / 10449 / 10457 / 10425 / atp9
Start / 10655 / 10633 / 10601 / 10609 / 10615 / 10586 / nad9
End / 11221 / 11199 / 11167 / 11175 / 11181 / 11152 / nad9
Start / 11282 / 11260 / 11228 / 11236 / 11242 / 11213 / cob
End / 12433 / 12411 / 12379 / 12387 / 12393 / 12364 / cob
Start / 12572 / 12542 / 12506 / 12513 / 12528 / 12496 / atp1
End / 14101 / 14071 / 14035 / 14042 / 14057 / 14025 / atp1
Start / 14182 / 14152 / 14166 / 14123 / 14137 / 14106 / trnE (uuc)
End / 14253 / 14223 / 14187 / 14194 / 14208 / 14177 / trnE (uuc)
Start / 14283 / 14253 / 14217 / 14224 / 14238 / 14207 / nad4
End / 15758 / 15728 / 15692 / 15699 / 15713 / 15682 / nad4
Start / 15781 / 15751 / 15715 / 15722 / 15736 / 15705 / trnH (gug)
End / 15853 / 15823 / 15787 / 15794 / 15808 / 15777 / trnH (gug)
Start / 15857 / 15827 / 15791 / 15798 / 15812 / 15781 / orf142
End / 16285 / 16255 / 16219 / 16226 / 16240 / 16209 / orf142
Start / 16295 / 16265 / 16229 / 16236 / 16250 / 16219 / nad7
End / 17473 / 17443 / 17407 / 17414 / 17428 / 17397 / nad7
Start / 17591 / 17559 / 17523 / 17530 / 17544 / 17515 / nad2
End / 19084 / 19052 / 19016 / 19023 / 19037 / 19008 / nad2
Start / 19091 / 19059 / 19023 / 19030 / 19044 / 19015 / trnF (gaa)
End / 19164 / 19132 / 19096 / 19103 / 19117 / 19088 / trnF (gaa)
Start / 19183 / 19151 / 19115 / 19122 / 19136 / 19107 / rps10
End / 19509 / 19477 / 19441 / 19448 / 19462 / 19433 / rps10
Start / 19514 / 19482 / 19446 / 19453 / 19467 / 19438 / trnR (gcg)
End / 19587 / 19555 / 19519 / 19526 / 19540 / 19511 / trnR (gcg)
Start / 19598 / 19566 / 19530 / 19537 / 19551 / 19522 / trnQ (uug)
End / 19669 / 19637 / 19601 / 19608 / 19622 / 19593 / trnQ (uug)
Species
P. infestans / P. phaseoli / P.
andinaIc / P.
andina Ia / P. ipomoeae / P. mirabilis / Location
Start / 19671 / 19639 / 19603 / 19610 / 19624 / 19595 / trnI (gau)
End / 19744 / 19712 / 19676 / 19683 / 19697 / 19668 / trnI (gau)
Start / 19747 / 19715 / 19679 / 19686 / 19700 / 19671 / trnV (uac)
End / 19819 / 19787 / 19751 / 19758 / 19772 / 19743 / trnV (uac)
Start / 19836 / 19804 / 19768 / 19775 / 19789 / 19760 / rps12
End / 20216 / 20184 / 20148 / 20155 / 20169 / 20140 / rps12
Start / 20146 / 20114 / 20078 / 20085 / 20099 / 20070 / rps7
End / 20619 / 20587 / 20551 / 20558 / 20572 / 20543 / rps7
Start / 20675 / 20643 / 20607 / 20614 / 20628 / 20599 / cox3
End / 21592 / 21560 / 21524 / 21531 / 21545 / 21516 / cox3
Start / 21620 / 21588 / 21552 / 21559 / 21573 / 21544 / atp6
End / 22339 / 22307 / 22271 / 22278 / 22292 / 22263 / atp6
Start / 22370 / 22338 / 22302 / 22309 / 22322 / 22294 / trnD (guc)
End / 22443 / 22411 / 22375 / 22382 / 22395 / 22367 / trnD (guc)
Start / 22480 / 22448 / 22412 / 22419 / 22432 / 22404 / nad3
End / 22833 / 22801 / 22765 / 22772 / 22785 / 22757 / nad3
Start / 23053 / 23031 / 22983 / 22989 / 22995 / 22877 / nad5
End / 25047 / 25025 / 24977 / 24983 / 24989 / 24871 / nad5
Start / 25091 / 25069 / 25021 / 25027 / 25033 / 24915 / nad6
End / 25801 / 25779 / 27531 / 25737 / 25743 / 25625 / nad6
Start / 25827 / 25804 / 25747 / 25753 / 25769 / 25651 / trnR (ucu)
End / 25899 / 25876 / 25819 / 25825 / 25841 / 25723 / trnR (ucu)
Start / 26064 / 26025 / 25985 / 25991 / 25985 / 25887 / nad4L
End / 26367 / 26327 / 26287 / 26293 / 26287 / 26189 / nad4L
Start / 26370 / 26330 / 26290 / 26296 / 26290 / 26192 / nad1
End / 27350 / 27310 / 27270 / 27276 / 27270 / 27172 / nad1
Start / 27347 / 27307 / 27267 / 27273 / 27267 / 27169 / nad11
End / 29353 / 29313 / 29273 / 29279 / 29273 / 29175 / nad11
Start / 29438 / 29396 / 29356 / 29363 / 29356 / 29260 / trnL (uag)
End / 29520 / 29478 / 29438 / 29445 / 29438 / 29342 / trnL (uag)
Start / 29530 / 29488 / 29448 / 29455 / 29448 / 29352 / trnL (uaa)
End / 29613 / 29571 / 29531 / 29538 / 29531 / 29435 / trnL (uaa)
Species
P. infestans / P. phaseoli / P.
andinaIc / P.
andina Ia / P. ipomoeae / P. mirabilis / Location
Start / 29633 / 29591 / 29551 / 29559 / 29551 / 29455 / ymf16
End / 30379 / 30337 / 30297 / 30305 / 30297 / 30201 / ymf16
Start / 30570 / 30526 / 30486 / 30496 / 30486 / 30390 / trnC (gca)
End / 30640 / 30596 / 30556 / 30566 / 30556 / 30460 / trnC (gca)
Start / 30652 / 30608 / 30568 / 30578 / 30568 / 30472 / trnS (uga)
End / 30736 / 30692 / 30652 / 30662 / 30652 / 30556 / trnS (uga)
Start / 30758 / 30712 / 30673 / 30684 / 30673 / 30577 / rps11
End / 31174 / 31128 / 31089 / 31100 / 31089 / 30993 / rps11
Start / 31187 / 31141 / 31102 / 31113 / 31102 / 31006 / rps13
End / 31600 / 31554 / 31515 / 31526 / 31515 / 31419 / rps13
Start / 31629 / 31583 / 31544 / 31555 / 31544 / 31448 / rpl2
End / 32435 / 32389 / 32350 / 32361 / 32350 / 32254 / rpl2
Start / 32439 / 32393 / 32354 / 32365 / 32354 / 32258 / rps19
End / 32672 / 32626 / 32587 / 32598 / 32587 / 32491 / rps19
Start / 32676 / 32630 / 32591 / 32602 / 32591 / 32495 / rps3
End / 33479 / 33433 / 33394 / 33405 / 33394 / 33298 / rps3
Start / 33482 / 33436 / 33397 / 33408 / 33397 / 33301 / rpl16
End / 33886 / 3384 / 33801 / 33812 / 33801 / 33705 / rpl16
Start / 33889 / 33843 / 33804 / 33815 / 33804 / 33708 / trnI (cau)
End / 33962 / 33916 / 33877 / 33888 / 33877 / 33781 / trnI (cau)
Start / 33983 / 33937 / 33898 / 33909 / 33898 / 33802 / orf217
End / 34636 / 34590 / 34551 / 34562 / 34551 / 34455 / orf217
Start / 34698 / 34652 / 34613 / 34624 / 34613 / 34517 / atp8
End / 35090 / 35044 / 35005 / 35016 / 35005 / 34909 / atp8
Start / 35111 / 35066 / 35027 / 35037 / 35027 / 34931 / trnK (uuu)
End / 35183 / 35138 / 35099 / 35109 / 35099 / 35003 / trnK (uuu)
Start / 35187 / 35142 / 35103 / 35113 / 35103 / 35007 / trnA (ugc)
End / 35259 / 35214 / 35175 / 35185 / 35175 / 35079 / trnA (ugc)
Start / 35278 / 35233 / 35194 / 35204 / 35194 / 35098 / rps14
End / 35577 / 35532 / 35493 / 35503 / 35493 / 35397 / rps14
Start / 35591 / 35546 / 35509 / 35517 / 35507 / 35411 / rps8
End / 35971 / 35926 / 35889 / 35897 / 35887 / 35791 / rps8
Species
P. infestans / P. phaseoli / P.
andina Ic / P.
andina Ia / P. ipomoeae / P. mirabilis / Location
Start / 35979 / 35934 / 35896 / 35905 / 35984 / 35799 / rpl6
End / 36584 / 36539 / 36501 / 36510 / 36499 / 36404 / rpl6
Start / 36591 / 36546 / 36508 / 36517 / 36506 / 36411 / rps2
End / 37181 / 37136 / 37098 / 37107 / 37096 / 37001 / rps2
Start / 37191 / 37146 / 37108 / 37117 / 37106 / 37011 / rps4
End / 37652 / 37607 / 37569 / 37578 / 37567 / 37472 / rps4
Start / 37655 / 37610 / 37572 / 37581 / 37570 / 37475 / orf100
End / 37957 / 37912 / 37874 / 37883 / 37872 / 37777 / orf100
a Location of start and stop of each gene annotated in comparison to P.infestanIb mitochondrial genome as a reference (Paquin et al. 1997).
Supplemental Table 2. Locations of the polymorphisms within the mitochondrial genomes betweenP. infestans Ib mitochondrial genome and the other 1c clade Phytophthora species.
Polymorphism mutationa / P. infestans / P. phaseoli / P.andinaIc / P.
andina Ia / P. ipomoeae / P. mirabilis / Gene
CCTCCC / 174 / 174 / 174 / 174 / 174 / 172 / rnl
GGAGGG / 200 / 200 / 200 / 200 / 200 / 198 / rnl
GGAGGG / 226 / 226 / 226 / 226 / 226 / 224 / rnl
GGGGGA / 353 / 353 / 353 / 353 / 353 / 351 / rnl
TTTTCT / 373 / 373 / 373 / 373 / 373 / 371 / rnl
TTTTTA / 514 / 514 / 514 / 514 / 514 / 512 / rnl
GGAGGG / 1002 / 1002 / 1002 / 1002 / 1002 / 1000 / rnl
CCTCCC / 1090 / 1090 / 1090 / 1090 / 1090 / 1088 / rnl
AAGAAA / 1114 / 1114 / 1114 / 1114 / 1114 / 1112 / rnl
TTATAT / 1140 / 1140 / 1140 / 1140 / 1140 / 1138 / rnl
CCCCCT / 1272 / 1272 / 1272 / 1272 / 1272 / 1270 / rnl
TAATTT / 1548 / 1548 / 1548 / 1548 / 1548 / 1546 / rnl
ATTAAA / 1551 / 1551 / 1551 / 1551 / 1551 / 1549 / rnl
TAATTT / 1554 / 1554 / 1554 / 1554 / 1554 / 1552 / rnl
GTTGTG / 2022 / 2022 / 2022 / 2022 / 2022 / 2020 / rnl
CCCCCT / 2089 / 2089 / 2089 / 2089 / 2089 / 2087 / rnl
GGGGGA / 2105 / 2105 / 2105 / 2105 / 2105 / 2103 / rnl
AGAAAA / 2111 / 2111 / 2111 / 2111 / 2111 / 2109 / rnl
ATAAAA / 2572 / 2572 / 2572 / 2572 / 2572 / 2570 / rnl
TCCTCT / 2701 / 2701 / 2701 / 2701 / 2701 / 2699 / trnN
CAACAA / 2728 / 2728 / 2728 / 2728 / 2728 / 2726 / trnN
GGAGGG / 3000 / 3000 / 3000 / 3000 / 3000 / 2998 / trnP
CCTCCC / 3203 / 3203 / 3203 / 3203 / 3203 / 3201 / rpl14
AAAAAC / 3340 / 3340 / 3340 / 3340 / 3340 / 3338 / rpl14
CTTCTT / 3365 / 3365 / 3365 / 3365 / 3365 / 3363 / rpl14
TAATAA / 3404 / 3404 / 3404 / 3404 / 3404 / 3402 / rpl14
CCTCCT / 3470 / 3470 / 3470 / 3470 / 3470 / 3468 / rpl14
GGAGGG / 3594 / 3594 / 3594 / 3594 / 3594 / 3592 / rpl5
CCCCCT / 3615 / 3615 / 3615 / 3615 / 3615 / 3613 / rpl5
AAAAGA / 3791 / 3791 / 3791 / 3791 / 3791 / 3789 / rpl5
CAACCA / 3853 / 3853 / 3853 / 3853 / 3853 / 3851 / rpl5
AAAAAG / 3912 / 3912 / 3912 / 3912 / 3912 / 3910 / rpl5
AAAAAG / 3913 / 3913 / 3913 / 3913 / 3913 / 3911 / rpl5
TTTTCT / 3917 / 3917 / 3917 / 3917 / 3917 / 3915 / rpl5
CCCCTT / 3944 / 3944 / 3944 / 3944 / 3944 / 3942 / rpl5
CCCCCT / 3974 / 3974 / 3974 / 3974 / 3974 / 3972 / rpl5
TTTTTC / 3995 / 3995 / 3995 / 3995 / 3995 / 3993 / rpl5
AAAAGG / 4147 / 4147 / 4147 / 4147 / 4147 / 4145 / trnG
GAGGGG / 4397 / 4397 / 4397 / 4397 / 4397 / 4395 / trnY
AGAAAG / 5283 / 5294 / 5278 / 5278 / 5271 / 5293 / rns
CCCCCT / 5337 / 5348 / 5332 / 5332 / 5325 / 5347 / rns
ACCACC / 5427 / 5438 / 5422 / 5422 / 5415 / 5437 / rns
TTGTTT / 5778 / 5789 / 5773 / 5773 / 5766 / 5788 / rns
AACAAA / 5853 / 5864 / 5848 / 5848 / 5841 / 5863 / rns
Polymorphism mutationa / P. infestans / P. phaseoli / P. andina Ic / P.
andina
Ia / P. ipomoeae / P. mirabilis / Gene
CTTTTT / 6086 / 6097 / 6081 / 6081 / 6074 / 6096 / rns
AAAAAG / 6146 / 6157 / 6141 / 6141 / 6134 / 6156 / rns
AAAAAG / 6248 / 6259 / 6243 / 6243 / 6236 / 6258 / rns
ATAAAA / 6250 / 6261 / 6245 / 6245 / 6238 / 6260 / rns
CCCCCT / 6265 / 6276 / 6260 / 6260 / 6253 / 6275 / rns
AAAAGA / 6363 / 6374 / 6358 / 6358 / 6351 / 6373 / rns
GGAGGG / 6148 / 6429 / 6413 / 6413 / 6406 / 6428 / rns
AAAAAG / 6596 / 6607 / 6591 / 6591 / 6584 / 6606 / rns
CCCCCT / 6629 / 6640 / 6624 / 6624 / 6617 / 6639 / rns
AAAAAG / 6762 / 6773 / 6757 / 6757 / 6750 / 6772 / trnW
TATTTT / 7023 / 7034 / 7004 / 7005 / 7009 / 7021 / orf79
CTTTTC / 7028 / 7039 / 7009 / 7010 / 7014 / 7026 / orf79
TTCCAT / 7034 / 7045 / 7015 / 7016 / 7020 / 7032 / orf79
CCTCCC / 7052 / 7063 / 7021 / 7022 / 7038 / 7050 / orf79
AAAAAC / 7055 / 7066 / 7024 / 7025 / 7041 / 7053 / orf79
CTTCTT / 7062 / 7073 / 7031 / 7032 / 7048 / 7060 / orf79
TTTTAT / 7101 / 7112 / 7070 / 7071 / 7087 / 7099 / orf79
TCCTCC / 7169 / 7180 / 7138 / 7139 / 7155 / 7167 / orf79
TTTTTC / 7184 / 7195 / 7153 / 7154 / 7170 / 7182 / orf79
AAGAGA / 7190 / 7201 / 7159 / 7160 / 7176 / 7188 / orf79
CCTCTC / 7216 / 7227 / 7185 / 7186 / 7202 / 7214 / orf79
GGGGGA / 7217 / 7228 / 7186 / 7187 / 7203 / 7215 / orf79
GAARAG / 7226 / 7237 / 7195 / 7196 / 7212 / 7224 / orf79
CCCCTC / 7777 / 7767 / 7733 / 7734 / 7747 / 7712 / cox2
GAAGAA / 7813 / 7803 / 7769 / 7770 / 7783 / 7748 / cox2
GGGGAG / 7853 / 7843 / 7809 / 7810 / 7823 / 7788 / cox2
CCCCCT / 7874 / 7864 / 7830 / 7831 / 7844 / 7809 / cox2
TCCTCC / 7944 / 7934 / 7900 / 7901 / 7914 / 7879 / cox2
CCCCTC / 7963 / 7953 / 7919 / 7920 / 7933 / 7898 / cox2
GGGGGA / 7966 / 7956 / 7922 / 7923 / 7936 / 7901 / cox2
GGGGAG / 8149 / 8139 / 8105 / 8106 / 8119 / 8084 / cox2
TTTTTC / 8158 / 8148 / 8114 / 8115 / 8128 / 8093 / cox2
GGAGGG / 8189 / 8179 / 8145 / 8146 / 8159 / 8124 / cox2
AGGAGG / 8206 / 8196 / 8162 / 8163 / 8176 / 8141 / cox2
ATAAAA / 8221 / 8211 / 8177 / 8178 / 8191 / 8156 / cox2
GAAGAA / 8233 / 8223 / 8189 / 8190 / 8203 / 8168 / cox2
TCTTTT / 8260 / 8250 / 8216 / 8217 / 8230 / 8195 / cox2
TTTTCT / 8266 / 8256 / 8222 / 8223 / 8236 / 8201 / cox2
GAGGGG / 8423 / 8413 / 8379 / 8380 / 8393 / 8358 / cox2
GAGGGG / 8432 / 8422 / 8388 / 8389 / 8402 / 8367 / cox2
TTTTGT / 8487 / 8477 / 8443 / 8444 / 8457 / 8422 / orf32
CCACCC / 8542 / 8532 / 8498 / 8499 / 8512 / 8477 / orf32
TTTTTA / 8659 / 8644 / 8611 / 8616 / 8625 / 8592 / cox1
AAAAAC / 8660 / 8645 / 8612 / 8617 / 8626 / 8593 / cox1
AAAAGA / 8779 / 8764 / 8731 / 8736 / 8745 / 8712 / cox1
CCCCAC / 8890 / 8875 / 8842 / 8847 / 8856 / 8823 / cox1
Polymorphism mutationa / P. infestans / P. phaseoli / P. andina
Ic / P.
andina
Ia / P. ipomoeae / P. mirabilis / Gene
AGGAGG / 8912 / 8897 / 8864 / 8869 / 8878 / 8845 / cox1
TTTTTG / 8935 / 8920 / 8887 / 8892 / 8901 / 8868 / cox1
AAAAAG / 8980 / 8965 / 8932 / 8937 / 8946 / 8913 / cox1
AAAAGA / 9046 / 9031 / 8998 / 9003 / 9012 / 8979 / cox1
TTTTGT / 9191 / 9076 / 9043 / 9048 / 9057 / 9024 / cox1
TTCTTT / 9206 / 9191 / 9158 / 9163 / 9172 / 9139 / cox1
CCCCTC / 9269 / 9254 / 9221 / 9226 / 9235 / 9202 / cox1
AGAAAA / 9271 / 9256 / 9223 / 9228 / 9237 / 9204 / cox1
CCCCCT / 9313 / 9298 / 9265 / 9270 / 9279 / 9246 / cox1
TCTTTT / 9325 / 9310 / 9277 / 9282 / 9291 / 9258 / cox1
AAAACA / 9349 / 9334 / 9301 / 9306 / 9315 / 9282 / cox1
CTTCTT / 9365 / 9350 / 9317 / 9322 / 9331 / 9298 / cox1
AAAAAG / 9412 / 9397 / 9364 / 9369 / 9378 / 9345 / cox1
CTTCTT / 9427 / 9412 / 9379 / 9384 / 9393 / 9360 / cox1
ACAAAA / 9502 / 9487 / 9454 / 9459 / 9468 / 9435 / cox1
CCCCCT / 9509 / 9494 / 9461 / 9466 / 9475 / 9442 / cox1
AAAACA / 9517 / 9502 / 9469 / 9474 / 9483 / 9450 / cox1
GGAGGG / 9601 / 9586 / 9553 / 9558 / 9567 / 9534 / cox1
ACAAAA / 9607 / 9592 / 9559 / 9564 / 9573 / 9540 / cox1
GGGGAG / 9610 / 9595 / 9562 / 9567 / 9576 / 9543 / cox1
CCCCTC / 9715 / 9700 / 9667 / 9672 / 9681 / 9648 / cox1
CCCCCT / 9732 / 9717 / 9684 / 9689 / 9698 / 9665 / cox1
GTTGTT / 9739 / 9724 / 9691 / 9696 / 9705 / 9672 / cox1
AAAAAG / 9760 / 9745 / 9712 / 9717 / 9726 / 9693 / cox1
CCCCCT / 9772 / 9757 / 9724 / 9729 / 9738 / 9705 / cox1
TTTTAT / 9814 / 9799 / 9766 / 9771 / 9780 / 9747 / cox1
TTCTCC / 9898 / 9883 / 9850 / 9855 / 9864 / 9831 / cox1
CCCCCA / 9933 / 9918 / 9885 / 9890 / 9899 / 9866 / cox1
CTTCTC / 9934 / 9919 / 9886 / 9891 / 9900 / 9867 / cox1
GAAGAG / 9964 / 9949 / 9916 / 9921 / 9930 / 9897 / cox1
AAAAAC / 9974 / 9959 / 9926 / 9931 / 9940 / 9907 / cox1
TATTTC / 9985 / 9970 / 9937 / 9942 / 9951 / 9918 / cox1
TTTTCT / 9991 / 9976 / 9943 / 9948 / 9957 / 9924 / cox1
TTTCTT / 10366 / 10348 / 10315 / 10322 / 10330 / 10298 / atp9
CCCTCC / 10454 / 10436 / 10403 / 10410 / 10418 / 10386 / atp9
TTTTTC / 10772 / 10750 / 10718 / 10726 / 10732 / 10703 / nad9
TTTTTA / 10783 / 10761 / 10729 / 10737 / 10743 / 10714 / nad9
GGAGGG / 10909 / 10887 / 10855 / 10863 / 10869 / 10840 / nad9
CCCCCT / 10920 / 10898 / 10866 / 10874 / 10880 / 10851 / nad9
AAAACA / 10921 / 10899 / 10867 / 10875 / 10881 / 10852 / nad9
GGTGGG / 10970 / 10948 / 10916 / 10924 / 10930 / 10901 / nad9
AAAAGG / 10987 / 10965 / 10933 / 10941 / 10947 / 10918 / nad9
TTTTTC / 11146 / 11124 / 11092 / 11100 / 11106 / 11077 / nad9
GAGGGG / 11402 / 11380 / 11348 / 11356 / 11362 / 11333 / cob
CCTCCC / 11452 / 11430 / 11398 / 11406 / 11412 / 11383 / cob
ACAAAA / 11513 / 11491 / 11459 / 11467 / 11473 / 11444 / cob
Polymorphism mutationa / P. infestans / P. phaseoli / P. andina
Ic / P.
andina
Ia / P. ipomoeae / P. mirabilis / Gene
TTTTCT / 11544 / 11522 / 11490 / 11498 / 11504 / 11475 / cob
GGGGGA / 11552 / 11530 / 11498 / 11506 / 11512 / 11483 / cob
AGCAGG / 11561 / 11539 / 11507 / 11515 / 11521 / 11492 / cob
AAAACA / 11563 / 11541 / 11509 / 11517 / 11523 / 11494 / cob
CCCCTC / 11601 / 11579 / 11547 / 11555 / 11561 / 11532 / cob
AGGGGG / 11605 / 11583 / 11551 / 11559 / 11565 / 11536 / cob
AAAAAC / 11615 / 11593 / 11561 / 11569 / 11575 / 11546 / cob
TTTTCT / 11725 / 11703 / 11671 / 11679 / 11685 / 11656 / cob
CCCCCT / 11740 / 11718 / 11686 / 11694 / 11700 / 11671 / cob
TTTTTC / 11839 / 11817 / 11785 / 11793 / 11799 / 11770 / cob
AAAAGA / 11881 / 11859 / 11827 / 11835 / 11841 / 11812 / cob
CCCCTC / 11971 / 11949 / 11917 / 11925 / 11931 / 11902 / cob
CTTCTT / 11998 / 11976 / 11944 / 11952 / 11958 / 11929 / cob
AAAATA / 12058 / 12036 / 12004 / 12012 / 12018 / 11989 / cob
CTTCTT / 12166 / 12144 / 12112 / 12120 / 12126 / 12097 / cob
TTTTGT / 12170 / 12148 / 12116 / 12124 / 12130 / 12101 / cob
CCCCCT / 12205 / 12183 / 12151 / 12159 / 12165 / 12136 / cob
TCTTCT / 12217 / 12195 / 12163 / 12171 / 12177 / 12148 / cob
TTTTAT / 12331 / 12309 / 12277 / 12285 / 12291 / 12262 / cob
TTCTTT / 12343 / 12321 / 12289 / 12297 / 12303 / 12274 / cob
AAAAAG / 12886 / 12656 / 12620 / 12627 / 12642 / 12610 / atp1
GGGGGA / 12698 / 12668 / 12632 / 12639 / 12654 / 12622 / atp1
CTTCTT / 12722 / 12692 / 12656 / 12663 / 12678 / 12646 / atp1
GGAGGG / 12723 / 12693 / 12657 / 12664 / 12679 / 12647 / atp1
CCCCTC / 12790 / 12760 / 12724 / 12731 / 12746 / 12714 / atp1
TTTTTC / 12848 / 12818 / 12782 / 12789 / 12804 / 12772 / atp1
CTTCTT / 12896 / 12866 / 12830 / 12837 / 12852 / 12820 / atp1
GGAGGA / 12899 / 12869 / 12833 / 12840 / 12855 / 12823 / atp1
GAAGAA / 13067 / 13037 / 13001 / 13008 / 13023 / 12991 / atp1
AAAACA / 13103 / 13073 / 13037 / 13044 / 13059 / 13027 / atp1
AAAAAG / 13109 / 13079 / 13043 / 13050 / 13065 / 13033 / atp1
GGGGGA / 13202 / 13172 / 13136 / 13143 / 13158 / 13126 / atp1
TTTTTC / 13325 / 13295 / 13259 / 13266 / 13281 / 13249 / atp1
AAAAGA / 13328 / 13298 / 13262 / 13269 / 13284 / 13252 / atp1
TTTTTC / 13388 / 13358 / 13322 / 13329 / 13344 / 13312 / atp1
TCCTCA / 13391 / 13361 / 13325 / 13332 / 13347 / 13315 / atp1
TCTTTT / 13445 / 13415 / 13379 / 13386 / 13401 / 13369 / atp1
AGGAGG / 13508 / 13478 / 13442 / 13449 / 13464 / 13432 / atp1
GAGGGG / 13524 / 13494 / 13458 / 13465 / 13480 / 13448 / atp1
GGGGTG / 13589 / 13559 / 13523 / 13530 / 13545 / 13513 / atp1
TAATAA / 13601 / 13571 / 13535 / 13542 / 13557 / 13525 / atp1
GAGGAA / 13631 / 13601 / 13565 / 13572 / 13587 / 13555 / atp1
ATGATT / 13706 / 13676 / 13640 / 13647 / 13662 / 13630 / atp1
AAAAGA / 13777 / 13747 / 13711 / 13718 / 13733 / 13701 / atp1
AGGAGA / 13835 / 13805 / 13769 / 13776 / 13791 / 13759 / atp1
CCTCCC / 13842 / 13812 / 13776 / 13783 / 13798 / 13766 / atp1
Polymorphism mutationa / P. infestans / P. phaseoli / P. andina
Ic / P.
andina
Ia / P. ipomoeae / P. mirabilis / Gene
TTCTTT / 13935 / 13905 / 13869 / 13876 / 13891 / 13859 / atp1
GGGGAG / 13964 / 13934 / 13898 / 13905 / 13920 / 13888 / atp1
AAAACA / 13994 / 13964 / 13928 / 13935 / 13950 / 13918 / atp1
AAAAAG / 14003 / 13973 / 13937 / 13944 / 13959 / 13927 / atp1
GGGGAG / 14223 / 14193 / 14157 / 14164 / 14178 / 14147 / trnE
GGGGGA / 14304 / 14274 / 14238 / 14245 / 14259 / 14228 / nad4
GGGGGA / 14379 / 14349 / 14313 / 14320 / 14334 / 14303 / nad4
TTTTCT / 14475 / 14445 / 14409 / 14416 / 14430 / 14399 / nad4
CCACCC / 14504 / 14474 / 14438 / 14445 / 14459 / 14428 / nad4
GGGGGA / 14529 / 14499 / 14463 / 14470 / 14484 / 14453 / nad4
TTCTTT / 14583 / 14553 / 14517 / 14524 / 14538 / 14507 / nad4
CTTTTT / 14605 / 14574 / 14538 / 14545 / 14559 / 14528 / nad4
GGGGTT / 14676 / 14646 / 14610 / 14617 / 14631 / 14600 / nad4
AAAAAG / 14742 / 14712 / 14676 / 14683 / 14697 / 14666 / nad4
TTGTTT / 14910 / 14880 / 14844 / 14851 / 14865 / 14834 / nad4
TCTTTT / 14954 / 14924 / 14888 / 14895 / 14909 / 14878 / nad4
CTCCCA / 14955 / 14925 / 14889 / 14896 / 14910 / 14879 / nad4
AAAAGA / 14994 / 14964 / 14928 / 14925 / 14949 / 14918 / nad4
TTTTTC / 15024 / 14994 / 14958 / 14965 / 14979 / 14948 / nad4
AACAAA / 15036 / 15006 / 14970 / 14977 / 14991 / 14960 / nad4
CCCCCA / 15084 / 15054 / 15018 / 15025 / 15039 / 15008 / nad4
GGAGGG / 15150 / 15120 / 15084 / 15091 / 15105 / 15074 / nad4
TTCTTT / 15283 / 15253 / 15217 / 15224 / 15238 / 15207 / nad4
TTTTCT / 15315 / 15285 / 15249 / 15256 / 15270 / 15239 / nad4
GGGGGA / 15363 / 15333 / 15297 / 15304 / 15318 / 15287 / nad4
TTTTGT / 15407 / 15377 / 15341 / 15348 / 15362 / 15331 / nad4
AGGAGA / 15477 / 15447 / 15411 / 15418 / 15432 / 15401 / nad4
CCCCCT / 15707 / 15677 / 15641 / 15648 / 15662 / 15631 / nad4
CCCCCT / 15795 / 15765 / 15729 / 15736 / 15750 / 15719 / trnH
CTTCTT / 15896 / 15866 / 15830 / 15837 / 15851 / 15820 / orf142
GAAGAA / 15998 / 15968 / 15932 / 15939 / 15953 / 15922 / orf142
CCCCCT / 16039 / 16009 / 15973 / 15980 / 15994 / 15963 / orf142
AGGAGG / 16098 / 16068 / 16032 / 16039 / 16053 / 16022 / orf142
CCCCCT / 16142 / 16112 / 16076 / 16083 / 16097 / 16066 / orf142
AAAAAT / 16162 / 16132 / 16096 / 16103 / 16117 / 16086 / orf142
GAGGGG / 16172 / 16142 / 16106 / 16113 / 16127 / 16096 / orf142
CCTCCC / 16280 / 16250 / 16214 / 16221 / 16235 / 16204 / orf142
AAAACA / 16493 / 16463 / 16427 / 16434 / 16448 / 16417 / nad7
ATAAAA / 16529 / 16499 / 16463 / 16470 / 16484 / 16453 / nad7
GGGGGA / 16598 / 16568 / 16532 / 16539 / 16553 / 16522 / nad7
ACAAAA / 16683 / 16655 / 16619 / 16626 / 16640 / 16609 / nad7
TTTTCT / 16760 / 16730 / 16694 / 16701 / 16715 / 16684 / nad7
AAAAGA / 16793 / 16763 / 16727 / 16734 / 16748 / 16717 / nad7
CTTCTC / 16844 / 16814 / 16778 / 16785 / 16799 / 16768 / nad7
CCCCCT / 16910 / 16880 / 16844 / 16851 / 16865 / 16834 / nad7
AGGAGT / 16928 / 16898 / 16862 / 16869 / 16883 / 16852 / nad7
Polymorphism mutationa / P. infestans / P. phaseoli / P. andina Ic / P.
andina
Ia / P. ipomoeae / P. mirabilis / Gene
TTGTTT / 16955 / 16925 / 16889 / 16896 / 16910 / 16879 / nad7
CCCCCA / 16994 / 16964 / 16928 / 16935 / 16949 / 16918 / nad7
TTTTTC / 17000 / 16970 / 16934 / 16941 / 16955 / 16924 / nad7
TTTTTG / 17015 / 16985 / 16949 / 16956 / 16970 / 16939 / nad7
TTTTCT / 17078 / 17048 / 17012 / 17019 / 17033 / 17002 / nad7
GGGGGT / 17176 / 17146 / 17110 / 17117 / 17131 / 17100 / nad7
AAAAAC / 17186 / 17156 / 17120 / 17127 / 17141 / 17110 / nad7
TTTTTC / 17192 / 17162 / 17126 / 17133 / 17147 / 17116 / nad7
AGAAAA / 17195 / 17165 / 17129 / 17136 / 17150 / 17119 / nad7
GGGGGA / 17198 / 17168 / 17132 / 17139 / 17153 / 17122 / nad7
AACAAA / 17354 / 17324 / 17288 / 17295 / 17309 / 17278 / nad7
TGTTTT / 17372 / 17342 / 17306 / 17313 / 17327 / 17296 / nad7
AAAAAG / 17386 / 17356 / 17320 / 17327 / 17341 / 17310 / nad7
AAGAAA / 17423 / 17393 / 17357 / 17364 / 17378 / 17347 / nad7
AGGGGG / 17882 / 17850 / 17814 / 17821 / 17835 / 17806 / nad2
GGGGTG / 18017 / 17985 / 17949 / 17956 / 17970 / 17941 / nad2
TTTTCT / 18082 / 18050 / 18014 / 18021 / 18035 / 18006 / nad2
GGGGGA / 18161 / 18129 / 18093 / 18100 / 18114 / 18085 / nad2
GGTGGG / 18293 / 18261 / 18225 / 18232 / 18246 / 18217 / nad2
GGGGGA / 18304 / 18272 / 18236 / 18243 / 18257 / 18228 / nad2
GTTGTT / 18379 / 18347 / 18311 / 18318 / 18332 / 18303 / nad2
AATAAA / 18431 / 18399 / 18363 / 18370 / 18384 / 18355 / nad2
AAAAGA / 18487 / 18455 / 18419 / 18426 / 18440 / 18411 / nad2
CCTCCC / 18502 / 18470 / 18434 / 18441 / 18455 / 18426 / nad2
GAAGAA / 18511 / 18479 / 18443 / 18450 / 18464 / 18435 / nad2
AAAAAG / 18520 / 18488 / 18452 / 18459 / 18473 / 18444 / nad2
TCTTTT / 18547 / 18515 / 18479 / 18486 / 18500 / 18471 / nad2
CCTCCC / 18626 / 18594 / 18558 / 18565 / 18579 / 18550 / nad2
AAAAGA / 18694 / 18662 / 18626 / 18633 / 18647 / 18618 / nad2
CTACCC / 18787 / 18755 / 18719 / 18726 / 18740 / 18711 / nad2
CAACAA / 18823 / 18791 / 18755 / 18762 / 18776 / 18747 / nad2
CTTCTT / 18865 / 18833 / 18797 / 18804 / 18818 / 18789 / nad2
GGGGGA / 18988 / 18956 / 18920 / 18927 / 18941 / 18912 / nad2
TTTTTC / 18996 / 18964 / 18928 / 18935 / 18949 / 18920 / nad2
TTTTTA / 19003 / 18971 / 18935 / 18942 / 18956 / 18927 / nad2
TTTTTC / 19019 / 18987 / 18951 / 18958 / 18972 / 18943 / nad2
ACCACC / 19029 / 18997 / 18961 / 18968 / 18982 / 18953 / nad2
GGGGGA / 19046 / 19014 / 18978 / 18985 / 18999 / 18970 / nad2
AGAAAA / 19061 / 19029 / 18993 / 19000 / 19014 / 18985 / nad2
TCCTCC / 19093 / 19061 / 19025 / 19032 / 19046 / 19017 / trnF
AAAACA / 19259 / 19227 / 19191 / 19198 / 19212 / 19183 / rps10
CCCCCT / 19304 / 19272 / 19236 / 19243 / 19257 / 19228 / rps10
AGAAAA / 19435 / 19403 / 19367 / 19374 / 19388 / 19359 / rps10
GAGGGG / 19540 / 19508 / 19472 / 19479 / 19493 / 19464 / trnR
GGGGGA / 19571 / 19539 / 19503 / 19510 / 19524 / 19495 / trnR
TTTTTA / 19847 / 19815 / 19779 / 19786 / 19800 / 19771 / rps12
Polymorphism mutationa / P. infestans / P. phaseoli / P. andina Ic / P.
andina
Ia / P. ipomoeae / P. mirabilis / Gene
CTTCTT / 19910 / 19878 / 19842 / 19849 / 19863 / 19834 / rps12
AACAAA / 19967 / 19935 / 19899 / 19906 / 19920 / 19891 / rps12
GGGGGA / 19976 / 19944 / 19908 / 19915 / 19929 / 19900 / rps12
TTCTTT / 20009 / 19977 / 19941 / 19948 / 19962 / 19933 / rps12
TTTTTC / 20010 / 19978 / 19942 / 19949 / 19963 / 19934 / rps12
TTTTTA / 20015 / 19983 / 19947 / 19954 / 19968 / 19939 / rps12
TCCTCT / 20018 / 19986 / 19950 / 19957 / 19971 / 19942 / rps12
GAAGAA / 20021 / 19989 / 19953 / 19960 / 19974 / 19945 / rps12
GAAGAA / 20027 / 19995 / 19959 / 19966 / 19980 / 19951 / rps12
AGAAGA / 20036 / 20004 / 19968 / 19975 / 19989 / 19960 / rps12
TTTTCT / 20042 / 20010 / 19974 / 19981 / 19995 / 19966 / rps12
GGAGGG / 20045 / 20013 / 19977 / 19984 / 19998 / 19969 / rps12
AAAAAT / 20054 / 20022 / 19986 / 19993 / 20007 / 19978 / rps12
GGGGGA / 20069 / 20037 / 20001 / 20008 / 20022 / 19993 / rps12
AGGAGG / 20090 / 20058 / 20022 / 20029 / 20043 / 20014 / rps12
CCCCCA / 20136 / 20104 / 20068 / 20075 / 20089 / 20060 / rps12
CCCCCT / 20171 / 20139 / 20103 / 20110 / 20124 / 20095 / rps12
AAAAAG / 20180 / 20148 / 20112 / 20119 / 20133 / 20104 / rps12
CCCCCT / 20171 / 20139 / 20103 / 20110 / 20124 / 20095 / rps7
AAAAAG / 20180 / 20148 / 20112 / 20119 / 20133 / 20104 / rps7
TTTTTG / 20367 / 20335 / 20299 / 20306 / 20320 / 20291 / rps7
CCCCCT / 20388 / 20356 / 20320 / 20327 / 20341 / 20312 / rps7
GGAGGG / 20422 / 20390 / 20354 / 20361 / 20375 / 20346 / rps7
GGGGGA / 20516 / 20484 / 20448 / 20455 / 20469 / 20440 / rps7
CCCCAC / 20711 / 20679 / 20643 / 20650 / 20664 / 20635 / cox3
CCCCTC / 20785 / 20753 / 20717 / 20724 / 20738 / 20709 / cox3
GGGGAG / 20800 / 20768 / 20732 / 20739 / 20753 / 20724 / cox3
TTTTTG / 20818 / 20786 / 20750 / 20757 / 20771 / 20742 / cox3
AAAAAC / 20878 / 20846 / 20810 / 20817 / 20831 / 20802 / cox3
GGGGGA / 20888 / 20856 / 20820 / 20827 / 20841 / 20812 / cox3
ACCACT / 20902 / 20870 / 20834 / 20841 / 20855 / 20826 / cox3
TCCTCC / 21109 / 21077 / 21041 / 21048 / 21062 / 21033 / cox3
CAACAA / 21127 / 21095 / 21059 / 21066 / 21080 / 21051 / cox3
GGGGGA / 21169 / 21137 / 21101 / 21108 / 21122 / 21093 / cox3
TTTTTC / 21256 / 21224 / 21188 / 21195 / 21209 / 21180 / cox3
AAGAAA / 21493 / 21461 / 21425 / 21432 / 21446 / 21417 / cox3
CCCCCT / 21496 / 21464 / 21428 / 21435 / 21449 / 21420 / cox3
CCTCCT / 21502 / 21470 / 21434 / 21441 / 21455 / 21426 / cox3
AACAAA / 21565 / 21533 / 21497 / 21504 / 21518 / 21489 / cox3
TTTTCT / 21631 / 21599 / 21563 / 21570 / 21584 / 21555 / atp6
GGGGGA / 21674 / 21642 / 21606 / 21613 / 21627 / 21598 / atp6
GGAGGG / 21707 / 21675 / 21639 / 21646 / 21660 / 21631 / atp6
TTTTTC / 21790 / 21758 / 21722 / 21729 / 21743 / 21714 / atp6
TTTTTA / 21823 / 21791 / 21755 / 21762 / 21776 / 21747 / atp6
CCCCCT / 21831 / 21799 / 21763 / 21770 / 21784 / 21755 / atp6
CCCCCT / 21910 / 21878 / 21842 / 21849 / 21863 / 21834 / atp6
Polymorphism mutationa / P. infestans / P. phaseoli / P. andina Ic / P.
andina
Ia / P. ipomoeae / P. mirabilis / Gene
TCTTTT / 21925 / 21893 / 21857 / 21864 / 21878 / 21849 / atp6
CCTCCC / 21960 / 21928 / 21892 / 21899 / 21913 / 21884 / atp6
AGAAAA / 22063 / 22031 / 21995 / 22002 / 22016 / 21987 / atp6
TTTTCT / 22093 / 22061 / 22025 / 22032 / 22046 / 22017 / atp6
TGGTTG / 22111 / 22079 / 22043 / 22050 / 22064 / 22035 / atp6
ACCACC / 22115 / 22083 / 22047 / 22054 / 22068 / 22039 / atp6
CCTCCT / 22198 / 22166 / 22130 / 22137 / 22151 / 22122 / atp6
GGGGGA / 22309 / 22277 / 22241 / 22248 / 22262 / 22233 / atp6
GGGGGA / 22427 / 22395 / 22359 / 22366 / 22379 / 22351 / trnD
CCCCCT / 22496 / 22464 / 22428 / 22435 / 22448 / 22420 / nad3
AAAAAG / 22596 / 22564 / 22528 / 22535 / 22548 / 22520 / nad3
GGAGGG / 22630 / 22598 / 22562 / 22569 / 22582 / 22554 / nad3
CCCCCT / 22689 / 22657 / 22621 / 22628 / 22641 / 22613 / nad3
AAAAAG / 22695 / 22663 / 22627 / 22634 / 22647 / 22619 / nad3
GGGGGA / 22708 / 22676 / 22640 / 22647 / 22660 / 22632 / nad3
TTTTTA / 22761 / 22729 / 22693 / 22700 / 22713 / 22685 / nad3
AAAAAG / 23065 / 23043 / 22995 / 23001 / 23007 / 22889 / nad5
CCTCCC / 23066 / 23044 / 22996 / 23002 / 23008 / 22890 / nad5
GGTGGG / 23139 / 23117 / 23069 / 23075 / 23081 / 22963 / nad5
AAAAAC / 23176 / 23154 / 23106 / 23112 / 23118 / 23000 / nad5
ACAAAA / 23230 / 23208 / 23160 / 23166 / 23172 / 23054 / nad5
TCCTCC / 23292 / 23270 / 23222 / 23228 / 23234 / 23116 / nad5
GTTGTT / 23325 / 23303 / 23255 / 23261 / 23267 / 23149 / nad5
CCTCCC / 23373 / 23351 / 23303 / 23309 / 23315 / 23197 / nad5
TAATAG / 23388 / 23366 / 23318 / 23324 / 23330 / 23212 / nad5
AGAAAA / 23472 / 23450 / 23402 / 23408 / 23414 / 23296 / nad5
TTTTCT / 23514 / 23492 / 23444 / 23450 / 23456 / 23338 / nad5
AGAAAA / 23532 / 23510 / 23462 / 23468 / 23474 / 23356 / nad5
GGAGGG / 23570 / 23548 / 23500 / 23506 / 23512 / 23394 / nad5
CTTCTC / 23581 / 23559 / 23511 / 23517 / 23523 / 23405 / nad5
TTTTTC / 23637 / 23615 / 23567 / 23573 / 23579 / 23461 / nad5
AAAAAG / 23668 / 23646 / 23598 / 23604 / 23610 / 23492 / nad5
GAAGAA / 23742 / 23720 / 23672 / 23678 / 23684 / 23566 / nad5
CCCCCT / 23782 / 23760 / 23712 / 23718 / 23724 / 23606 / nad5
ACAAAA / 23832 / 23810 / 23762 / 23768 / 23774 / 23656 / nad5
GGGGGT / 23883 / 23861 / 23813 / 23819 / 23825 / 23707 / nad5
AAGAAA / 23889 / 23867 / 23819 / 23825 / 23831 / 23713 / nad5
GGGGAA / 23956 / 23934 / 23886 / 23892 / 23898 / 23780 / nad5
AAAAAG / 23961 / 23939 / 23891 / 23897 / 23903 / 23785 / nad5
TTTTTC / 24006 / 23984 / 23936 / 23942 / 23948 / 23830 / nad5
AAAAAG / 24060 / 24038 / 23990 / 23996 / 24002 / 23884 / nad5
GGGGAA / 24165 / 24143 / 24095 / 24101 / 24107 / 23989 / nad5
ACAAAA / 24172 / 24150 / 24102 / 24108 / 24114 / 23996 / nad5
ACCACC / 24180 / 24158 / 24110 / 24116 / 24122 / 24004 / nad5
CCCCCT / 24264 / 24242 / 24194 / 24200 / 24206 / 24088 / nad5
ACAAAA / 24279 / 24257 / 24209 / 24215 / 24221 / 24103 / nad5
Polymorphism mutationa / P. infestans / P. phaseoli / P. andina Ic / P.
andina
Ia / P. ipomoeae / P. mirabilis / Gene
TTTTCT / 24613 / 24591 / 24543 / 24549 / 24555 / 24437 / nad5
TTTTCT / 24708 / 24686 / 24638 / 24644 / 24650 / 24532 / nad5
AAAAAC / 24736 / 24714 / 24666 / 24672 / 24678 / 24560 / nad5
AGAAAA / 24772 / 24750 / 24702 / 24708 / 24714 / 24596 / nad5
AAAAGA / 24793 / 24771 / 24723 / 24729 / 24735 / 24617 / nad5
TCCTCC / 24846 / 24824 / 24776 / 27482 / 24788 / 24670 / nad5
TTTTCT / 24874 / 24852 / 24804 / 24810 / 24816 / 24698 / nad5
TTTTTC / 25020 / 24998 / 24950 / 24956 / 24962 / 24844 / nad5
CCTCCC / 25185 / 25163 / 25115 / 25121 / 25127 / 25009 / nad6
CCTCCC / 25209 / 25187 / 25139 / 25145 / 25151 / 25033 / nad6
TATTTT / 25235 / 25213 / 25165 / 25171 / 25177 / 25059 / nad6
AAGAAA / 25282 / 25260 / 25212 / 25218 / 25224 / 25106 / nad6
CCTCCC / 25285 / 25263 / 25215 / 25221 / 25227 / 25109 / nad6
GGAGGG / 25331 / 25309 / 25261 / 25267 / 25273 / 25155 / nad6
AAGAAA / 25447 / 25425 / 25377 / 25383 / 25389 / 25271 / nad6
GTTGTC / 25525 / 25503 / 25455 / 25461 / 25467 / 25349 / nad6
AAAACA / 25609 / 25587 / 25539 / 25545 / 25551 / 25433 / nad6
CCCCCT / 25675 / 25653 / 25605 / 25611 / 25617 / 25499 / nad6
GGAGGG / 26119 / 26079 / 26039 / 26045 / 26039 / 25941 / nad4L
TTTTTA / 26200 / 26160 / 26120 / 26126 / 26120 / 26022 / nad4L
AAAAAG / 26253 / 26213 / 26173 / 26179 / 26173 / 26075 / nad4L
TTTTAT / 26346 / 26306 / 26266 / 26272 / 26266 / 26168 / nad4L
AAAAAG / 26403 / 26363 / 26323 / 26329 / 26323 / 26225 / nad1
CCCCCA / 26484 / 26444 / 26404 / 26410 / 26404 / 26306 / nad1
CCCCCT / 26531 / 26491 / 26451 / 26457 / 26451 / 26353 / nad1
TTTTCT / 26532 / 26492 / 26452 / 26458 / 26452 / 26354 / nad1
TTTTTA / 26556 / 26516 / 26476 / 26482 / 26476 / 26378 / nad1
CCTCTT / 26691 / 26651 / 26611 / 26617 / 26611 / 26513 / nad1
ACCACG / 26712 / 26672 / 26632 / 26638 / 26632 / 26534 / nad1
AAAACA / 26730 / 26690 / 26650 / 26656 / 26650 / 26552 / nad1
TTCTTT / 26859 / 26819 / 26779 / 26785 / 26779 / 26681 / nad1
GGGGGA / 26874 / 26834 / 26794 / 26800 / 26794 / 26696 / nad1
TTTTAT / 26898 / 26858 / 26818 / 26824 / 26818 / 26720 / nad1
AAAAAG / 26901 / 26861 / 26821 / 26827 / 26821 / 26723 / nad1
TTTTGT / 26955 / 26915 / 26875 / 26881 / 26875 / 26777 / nad1
AAAAGA / 26982 / 26942 / 26902 / 26908 / 26902 / 26804 / nad1
CCCCCT / 27038 / 26998 / 26958 / 26964 / 26958 / 26860 / nad1
AGAAAA / 27051 / 27011 / 26971 / 26977 / 26971 / 26873 / nad1
AAAAGA / 27066 / 27026 / 26986 / 26992 / 26986 / 26888 / nad1
CTTCTT / 27201 / 27161 / 27121 / 27127 / 27121 / 27023 / nad1
CCTCCT / 27266 / 27226 / 27186 / 27192 / 27186 / 27088 / nad1
TTTTGT / 27315 / 27275 / 27235 / 27241 / 27235 / 27137 / nad1
TTTTCT / 27359 / 27319 / 27279 / 27285 / 27279 / 27181 / nad11
TTCTTT / 27443 / 27403 / 27363 / 27369 / 27363 / 27265 / nad11
AAAAAG / 27542 / 27502 / 27462 / 27468 / 27462 / 27364 / nad11
CCCCCT / 27585 / 27545 / 27505 / 27511 / 27505 / 27407 / nad11
Polymorphism mutationa / P. infestans / P. phaseoli / P. andina Ic / P.
andina
Ia / P. ipomoeae / P. mirabilis / Gene
GGGGAG / 27639 / 27598 / 27558 / 27564 / 27558 / 27460 / nad11
AAATAA / 27672 / 27632 / 27592 / 27598 / 27592 / 27494 / nad11
AAAATA / 27685 / 27645 / 27605 / 27611 / 27605 / 27507 / nad11
AAAAGA / 27763 / 27723 / 27683 / 27869 / 27683 / 27585 / nad11
GGAGGG / 27798 / 27758 / 27718 / 27724 / 27718 / 27620 / nad11
TTTTGT / 27810 / 27770 / 27730 / 27736 / 27730 / 27632 / nad11
AGGAGG / 27844 / 27804 / 27764 / 27770 / 27764 / 27666 / nad11
GTGGGG / 27868 / 27828 / 27788 / 27794 / 27788 / 27690 / nad11
AAAAAG / 27924 / 27884 / 27844 / 27850 / 27844 / 27746 / nad11
CCACCC / 28033 / 27993 / 27953 / 27959 / 27953 / 27855 / nad11
GAGGGA / 28124 / 28084 / 28044 / 28050 / 28044 / 27946 / nad11
CTCCCC / 28163 / 28123 / 28083 / 28089 / 28083 / 27985 / nad11
CTCCCC / 28222 / 28182 / 28142 / 28148 / 28142 / 28044 / nad11
CCCCCT / 28228 / 28188 / 28148 / 28154 / 28148 / 28050 / nad11
AAAGAA / 28229 / 28189 / 28149 / 28155 / 28149 / 28051 / nad11
TTTTTC / 28231 / 28191 / 28151 / 28157 / 28151 / 28053 / nad11
TTTTTG / 28262 / 28222 / 28182 / 28188 / 28182 / 28084 / nad11
AAAAAG / 28308 / 28268 / 28228 / 28234 / 28228 / 28130 / nad11
AAAAAG / 28353 / 28313 / 28273 / 28279 / 28273 / 28175 / nad11
TTTTTG / 28394 / 28354 / 28314 / 28320 / 28314 / 28216 / nad11
AAAAAG / 28418 / 28378 / 28338 / 28344 / 28338 / 28240 / nad11
TTCTTT / 28497 / 28457 / 28417 / 28423 / 28417 / 28319 / nad11
TTTTCT / 28512 / 28472 / 28432 / 28438 / 28432 / 28334 / nad11
CCCCCT / 28516 / 28476 / 28436 / 28442 / 28436 / 28338 / nad11
AAAAAG / 28532 / 28492 / 28452 / 28458 / 28452 / 28354 / nad11
AGAAAA / 28565 / 28525 / 28485 / 28491 / 28485 / 28387 / nad11
AGGAGA / 28640 / 28600 / 28560 / 28566 / 28560 / 28462 / nad11
AGGAGA / 28679 / 28639 / 28599 / 28605 / 28599 / 28501 / nad11
CTCCCC / 28748 / 28708 / 28668 / 28674 / 28668 / 28570 / nad11
AGGATA / 28805 / 28765 / 28725 / 28731 / 28725 / 28627 / nad11
AAAAGA / 28826 / 28786 / 28746 / 28752 / 28746 / 28648 / nad11
TGTTGT / 28850 / 28810 / 28770 / 28776 / 28770 / 28672 / nad11
GGGGGA / 28887 / 28847 / 28807 / 28813 / 28807 / 28709 / nad11
AAAAGA / 28910 / 28870 / 28830 / 28836 / 28830 / 28732 / nad11
GGGGAG / 28952 / 28912 / 28872 / 28878 / 28872 / 28774 / nad11
CCTCCC / 28969 / 28929 / 28889 / 28895 / 28889 / 28791 / nad11
AAAAAG / 29068 / 29028 / 28988 / 28994 / 28988 / 28890 / nad11
GGGGGA / 29083 / 29043 / 29003 / 29009 / 29003 / 28905 / nad11
GGGGGA / 29152 / 29112 / 29072 / 29078 / 29072 / 28974 / nad11
TTTTTG / 29180 / 29140 / 29100 / 29106 / 29100 / 29002 / nad11
AGGAGG / 29204 / 29164 / 29124 / 29130 / 29124 / 29026 / nad11
TTTTCT / 29228 / 29188 / 29148 / 29154 / 29148 / 29050 / nad11
TTTTAT / 29272 / 29232 / 29192 / 29198 / 29192 / 29094 / nad11
AAAACA / 29278 / 29238 / 29198 / 29204 / 29198 / 29100 / nad11
TTTTGT / 29280 / 29240 / 29200 / 29206 / 29200 / 29102 / nad11
GGAGGG / 29289 / 29249 / 29209 / 29215 / 29209 / 29111 / nad11
Polymorphism mutationa / P. infestans / P. phaseoli / P. andina Ic / P.
andina
Ia / P. ipomoeae / P. mirabilis / Gene
TCTTTT / 29454 / 29412 / 29372 / 29379 / 29372 / 29276 / trnL(uag)
TCTTTT / 29491 / 29449 / 29409 / 29416 / 29409 / 29313 / trnL(uag)
CCCCCT / 29494 / 29452 / 29412 / 29419 / 29412 / 29316 / trnL(uag)
AAAAAG / 29505 / 29463 / 29423 / 29430 / 29423 / 29327 / trnL(uag)
GTTGTT / 29560 / 29518 / 29478 / 29485 / 29478 / 29382 / trnL(uaa)
CTTCTT / 29660 / 29618 / 29578 / 29586 / 29578 / 29482 / ymf16
ACCACC / 29729 / 29687 / 29647 / 29655 / 29647 / 29551 / ymf16
TCTTTT / 29836 / 29794 / 29754 / 29762 / 29754 / 29658 / ymf16
TATTTT / 29973 / 29931 / 29891 / 29899 / 29891 / 29795 / ymf16
TTTTTC / 30002 / 29960 / 29920 / 29928 / 29920 / 29824 / ymf16
CACCCC / 30012 / 29970 / 29930 / 29938 / 29930 / 29834 / ymf16
GAAGAA / 30017 / 29975 / 29935 / 29943 / 29935 / 29839 / ymf16
GGGGGA / 30035 / 29993 / 29953 / 29961 / 29953 / 29857 / ymf16
TAATAA / 30061 / 30019 / 29979 / 29987 / 29979 / 29883 / ymf16
AAAAAG / 30067 / 30025 / 29985 / 29993 / 29985 / 29889 / ymf16
CCCCCT / 30100 / 30058 / 30018 / 30026 / 30018 / 29922 / ymf16
CAACAA / 30142 / 30100 / 30060 / 30068 / 30060 / 29964 / ymf16
GAAGAA / 30355 / 30313 / 30273 / 30281 / 30273 / 30177 / ymf16
TTTTTC / 30375 / 30333 / 30293 / 30301 / 30293 / 31097 / ymf16
TTTTTC / 30585 / 30541 / 30501 / 30511 / 30501 / 30405 / trnC
CCCCCT / 30730 / 30686 / 30646 / 30656 / 30646 / 30550 / trnS
AAGAAA / 30835 / 30787 / 30748 / 30759 / 30748 / 30652 / rps11
CTTCTT / 30851 / 30805 / 30766 / 30777 / 30766 / 30670 / rps11
GACGGG / 30878 / 30832 / 30793 / 30804 / 30793 / 30697 / rps11
CCCCCT / 31001 / 30955 / 30916 / 30927 / 30916 / 30820 / rps11
GGTGGG / 31024 / 30978 / 30939 / 30950 / 30939 / 30843 / rps11
AAAAAT / 31103 / 31057 / 31018 / 31029 / 31018 / 30922 / rps11
TTTTAT / 31122 / 31076 / 31037 / 31048 / 31037 / 30941 / rps11
CTCCCC / 31129 / 31083 / 31044 / 31055 / 31044 / 30948 / rps11
GGGGGA / 31231 / 31185 / 31146 / 31157 / 31146 / 31050 / rps13
CTTCTT / 31244 / 31198 / 31159 / 31170 / 31159 / 31063 / rps13
ACCACC / 31274 / 31228 / 31189 / 31200 / 31189 / 31093 / rps13
TGTTTT / 31279 / 31233 / 31194 / 31205 / 31194 / 31098 / rps13
TTCTTT / 31304 / 31258 / 31219 / 31230 / 31219 / 31123 / rps13
GGGGGA / 31310 / 31264 / 31225 / 31236 / 31225 / 31129 / rps13
ACAAAA / 31382 / 31336 / 31297 / 31308 / 31297 / 31201 / rps13
GTGGGG / 31383 / 31337 / 31298 / 31309 / 31298 / 31202 / rps13
CCACCC / 31397 / 31351 / 31312 / 31323 / 31312 / 31216 / rps13
CCTCCC / 31520 / 31474 / 31435 / 31446 / 31435 / 31339 / rps13
GGAGAA / 31532 / 31486 / 31447 / 31458 / 31447 / 31351 / rps13
CCACTT / 31540 / 31494 / 31455 / 31466 / 31455 / 31359 / rps13
AGAAAA / 31555 / 31509 / 31470 / 31481 / 31470 / 31374 / rps13
AAAAAC / 31635 / 31588 / 31549 / 31560 / 31549 / 31453 / rpl2
AAGAAA / 31694 / 31648 / 31609 / 31620 / 31609 / 31513 / rpl2
GGGGGA / 31783 / 31737 / 31698 / 31709 / 31698 / 31602 / rpl2
CAACAA / 31925 / 31879 / 31840 / 31851 / 31840 / 31744 / rpl2
Polymorphism mutationa / P. infestans / P. phaseoli / P. andina Ic / P.
andina
Ia / P. ipomoeae / P. mirabilis / Gene
GATGGG / 32009 / 31963 / 31924 / 31935 / 31924 / 31828 / rpl2
CCTCTT / 32027 / 31981 / 31942 / 31953 / 31942 / 31846 / rpl2
CCCCCT / 32033 / 31987 / 31948 / 31959 / 31948 / 31852 / rpl2
TCTTTT / 32054 / 32008 / 31969 / 31980 / 31969 / 31873 / rpl2
CCCCCT / 32067 / 32021 / 31982 / 31993 / 31982 / 31886 / rpl2
CAACAA / 32096 / 32050 / 32011 / 32022 / 32011 / 31915 / rpl2
AAAACA / 32141 / 32095 / 32056 / 32067 / 32056 / 31960 / rpl2
CCCCCA / 32162 / 32116 / 32077 / 32088 / 32077 / 31981 / rpl2
TTTTTC / 32186 / 32140 / 32101 / 32112 / 32101 / 32005 / rpl2
CCCCCT / 32249 / 32203 / 32164 / 32175 / 32164 / 32068 / rpl2
TCTTTT / 32303 / 32257 / 32218 / 32229 / 32218 / 32122 / rpl2
GGGGAG / 32378 / 32332 / 32293 / 32304 / 32293 / 32197 / rpl2
AAAAGA / 32603 / 32557 / 32518 / 32529 / 32518 / 32422 / rps19
CCTCCC / 32633 / 32587 / 32548 / 32559 / 32548 / 32452 / rps19
TTTTGT / 32750 / 32704 / 32665 / 32676 / 32665 / 32569 / rps3
TTTTTC / 32756 / 32710 / 32671 / 32682 / 32671 / 32575 / rps3
GGGGCG / 32805 / 32759 / 32720 / 32731 / 32720 / 32624 / rps3
TTTTCT / 32960 / 32914 / 32875 / 32886 / 32875 / 32779 / rps3
TTTTTC / 32963 / 32917 / 32878 / 32889 / 32878 / 32782 / rps3
ACAAAA / 32968 / 32922 / 32883 / 32894 / 32883 / 32787 / rps3
CCTCCC / 32979 / 32933 / 32894 / 32905 / 32894 / 32798 / rps3
CTTCTT / 33002 / 32956 / 32917 / 32928 / 32917 / 32821 / rps3
CCCCAC / 33053 / 33007 / 32968 / 32979 / 32968 / 32872 / rps3
TTTTTA / 33065 / 33019 / 32980 / 32991 / 32980 / 32884 / rps3
GGGGGA / 33067 / 33021 / 32982 / 32993 / 32982 / 32886 / rps3
CCACCC / 33239 / 33193 / 33154 / 33165 / 33154 / 33058 / rps3
CCTCCC / 33258 / 33212 / 33173 / 33184 / 33173 / 33077 / rps3
ATTATT / 33307 / 33261 / 33222 / 33233 / 33222 / 33126 / rps3
AAAAAG / 33341 / 33295 / 33256 / 33267 / 33256 / 33160 / rps3
CAACAA / 33344 / 33298 / 33259 / 33270 / 33359 / 33163 / rps3
GGGGGA / 33587 / 33541 / 33502 / 33513 / 33502 / 33406 / rpl16
GAAGAA / 33664 / 33618 / 33579 / 33590 / 33579 / 33483 / rpl16
GAAGAA / 33682 / 33636 / 33597 / 33608 / 33597 / 33501 / rpl16
GGGGAG / 33691 / 33645 / 33606 / 33617 / 33606 / 33510 / rpl16
CCCCCT / 33696 / 33650 / 33611 / 33622 / 33611 / 33515 / rpl16
TTTTTC / 33703 / 33657 / 33618 / 33629 / 33618 / 33522 / rpl16
GAAGAA / 33736 / 33690 / 33651 / 33662 / 33651 / 33555 / rpl16
TTTTTC / 33748 / 33702 / 33663 / 33674 / 33663 / 33567 / rpl16
GGGGGA / 33761 / 33715 / 33676 / 33687 / 33676 / 33580 / rpl16
CCCCCT / 33781 / 33735 / 33696 / 33707 / 33696 / 33600 / rpl16
CTTCTT / 33788 / 33742 / 33703 / 33714 / 33703 / 33607 / rpl16
AAAAAG / 33889 / 33843 / 33804 / 33815 / 33804 / 33708 / trnI
GGAGGG / 33932 / 33886 / 33847 / 33858 / 33847 / 33751 / trnI
AACAAA / 33986 / 33940 / 33901 / 33913 / 33901 / 33805 / orf217
CCCCAC / 34001 / 33955 / 33916 / 33927 / 33916 / 33820 / orf217
AAAAAG / 34155 / 34109 / 34070 / 34081 / 34070 / 33974 / orf217
Polymorphism mutationa / P. infestans / P. phaseoli / P. andina Ic / P.
andina
Ia / P. ipomoeae / P. mirabilis / Gene
CTTCTT / 34171 / 34125 / 34086 / 34097 / 34086 / 33990 / orf217
AAAACA / 34245 / 34199 / 34160 / 34171 / 34160 / 34064 / orf217
CCCCCT / 34294 / 34248 / 34209 / 34220 / 34209 / 34113 / orf217
GGGGGT / 34311 / 34266 / 34227 / 34238 / 34227 / 34131 / orf217
AGAAAA / 34312 / 34267 / 34228 / 34239 / 34228 / 34132 / orf217
CCCCCT / 34363 / 34317 / 34278 / 34289 / 34278 / 34182 / orf217
GGGGGA / 34372 / 34326 / 34287 / 34298 / 34287 / 34191 / orf217
CCTCCC / 34392 / 34346 / 34307 / 34318 / 34307 / 34211 / orf217
CCTCCC / 34400 / 34354 / 34315 / 34326 / 34315 / 34219 / orf217
GGAGGT / 34403 / 34357 / 34318 / 34329 / 34318 / 34222 / orf217
ATTATT / 34439 / 34393 / 34354 / 34365 / 34354 / 34258 / orf217
ATTATT / 34440 / 34394 / 34355 / 34366 / 34355 / 34259 / orf217
AAAAGA / 34521 / 34475 / 34436 / 34447 / 34436 / 34340 / orf217
CTCCCC / 34525 / 34479 / 34440 / 34451 / 34440 / 34344 / orf217
AAAACA / 34554 / 34508 / 34469 / 34480 / 34469 / 34373 / orf217
AAAACA / 34625 / 34579 / 34540 / 34557 / 34540 / 34444 / orf217
TTTCTT / 34718 / 34672 / 34633 / 34644 / 34633 / 34537 / atp8
AAAAAC / 34739 / 34693 / 34654 / 34665 / 34654 / 34558 / atp8
AAAAAG / 34814 / 34768 / 34729 / 34740 / 34729 / 34633 / atp8
ATAAAA / 34846 / 34800 / 34761 / 34772 / 34761 / 34665 / atp8
GGAGGG / 34932 / 34886 / 34847 / 34858 / 34847 / 34751 / atp8
CCCCCT / 34957 / 34911 / 34872 / 34883 / 34872 / 34776 / atp8
TCCTCT / 34989 / 34943 / 34904 / 34915 / 34904 / 34808 / atp8
CCTCAC / 35011 / 34965 / 34926 / 34937 / 34926 / 34830 / atp8
TTTTAT / 35012 / 34966 / 34927 / 34938 / 34927 / 34831 / atp8
TTTTGT / 35013 / 34967 / 34928 / 34839 / 34928 / 34832 / atp8
AAAAAT / 35028 / 34982 / 34943 / 34954 / 34943 / 34847 / atp8
TTTTTA / 35029 / 34983 / 34944 / 34955 / 34944 / 34848 / atp8
GGGGGA / 35035 / 34989 / 34950 / 34961 / 34950 / 34854 / atp8
AAAAAG / 35047 / 35001 / 34962 / 34973 / 34962 / 34866 / atp8
AAAAGA / 35324 / 35279 / 35240 / 35250 / 35240 / 35144 / rps14
GGGGAG / 35386 / 35341 / 35302 / 35312 / 35302 / 35206 / rps14
AAAAGA / 35400 / 35355 / 35316 / 35326 / 35316 / 35220 / rps14
CTCCCC / 35418 / 35373 / 35334 / 35344 / 35334 / 35238 / rps14
GGAGGG / 35488 / 35443 / 35404 / 35414 / 35404 / 35308 / rps14
AGGAGG / 35511 / 35466 / 35427 / 35437 / 35427 / 35331 / rps14
CCTCTT / 35517 / 35472 / 35433 / 35443 / 35433 / 35337 / rps14
GGGGGA / 35533 / 35488 / 35449 / 35459 / 35449 / 35353 / rps14
TTTTTA / 35544 / 35499 / 35460 / 35470 / 35460 / 35364 / rps14
CCTCCT / 35638 / 35593 / 35556 / 35564 / 35554 / 35458 / rps8
CCTCCC / 35644 / 35599 / 35562 / 35570 / 35560 / 35464 / rps8
CCCCTC / 35674 / 35629 / 35592 / 35600 / 35590 / 35494 / rps8
AAGAAA / 35710 / 35665 / 35628 / 35636 / 35626 / 35530 / rps8
TTCTTT / 35767 / 35722 / 35685 / 35693 / 35683 / 35587 / rps8
CTCCCC / 35802 / 35757 / 35720 / 35728 / 35718 / 35622 / rps8
AAAAAC / 35900 / 35855 / 35818 / 35826 / 35816 / 35720 / rps8
Polymorphism mutationa / P. infestans / P. phaseoli / P. andina Ic / P.
andina
Ia / P. ipomoeae / P. mirabilis / Gene
TTTTTA / 35914 / 35869 / 35832 / 35840 / 35830 / 35734 / rps8
GGGGGA / 35923 / 35878 / 35841 / 35849 / 35839 / 35743 / rps8
TTGTTT / 35944 / 35899 / 35862 / 35870 / 35860 / 35764 / rps8
AATAAA / 35993 / 35948 / 35910 / 35919 / 35908 / 35813 / rpl6
AAAAAG / 36087 / 36042 / 36004 / 36013 / 36002 / 35907 / rpl6
AAGAAA / 36091 / 36046 / 36008 / 36017 / 36006 / 35911 / rpl6
CAACAA / 36109 / 36064 / 36026 / 36035 / 36024 / 35929 / rpl6
CCCCTC / 36118 / 36073 / 36035 / 36044 / 36033 / 35938 / rpl6
AAAAAC / 36119 / 36074 / 36036 / 36045 / 36034 / 35939 / rpl6
AGGAGG / 36219 / 36174 / 36136 / 36145 / 36134 / 36039 / rpl6
AAAAAG / 36237 / 36192 / 36154 / 36163 / 36152 / 36057 / rpl6
TTATTT / 36269 / 36224 / 36186 / 36195 / 36184 / 36089 / rpl6
AAACAA / 36287 / 36242 / 36204 / 36213 / 36202 / 36107 / rpl6
GGAGGA / 36291 / 36246 / 36208 / 36217 / 36206 / 36111 / rpl6
CCCCCT / 36309 / 36264 / 36226 / 36235 / 36224 / 36129 / rpl6
AGAAGA / 36317 / 37272 / 36234 / 36243 / 36232 / 36137 / rpl6
TTTTTC / 36366 / 36321 / 36283 / 36292 / 36281 / 36186 / rpl6
TTCTTT / 36377 / 36332 / 36294 / 36303 / 36292 / 36197 / rpl6
ACAAAA / 36381 / 36336 / 36298 / 36307 / 36296 / 36201 / rpl6
AATAAA / 36389 / 36344 / 36306 / 36315 / 36304 / 36209 / rpl6
CTTCTT / 36401 / 36356 / 36318 / 36327 / 36316 / 36221 / rpl6
CTCCCC / 36427 / 36382 / 36344 / 36353 / 36342 / 36247 / rpl6
AAAAGA / 36524 / 36479 / 36441 / 36450 / 36439 / 36344 / rpl6
AAAAGA / 36545 / 36500 / 36462 / 36471 / 36460 / 36365 / rpl6
AAAAAC / 36597 / 36552 / 36514 / 36523 / 36512 / 36417 / rps2
AAAAAG / 36631 / 36586 / 36548 / 36557 / 36546 / 36451 / rps2
AAAAAG / 36662 / 36617 / 36579 / 36588 / 36577 / 36482 / rps2
GAAGAA / 36671 / 36626 / 36588 / 36597 / 36586 / 36491 / rps2
AAAAAC / 36698 / 36653 / 36615 / 36624 / 36613 / 36518 / rps2
AAGAGA / 36716 / 36671 / 36633 / 36642 / 36631 / 36536 / rps2
GGGGGA / 36720 / 36675 / 36637 / 36646 / 36635 / 36540 / rps2
ACAAAA / 36798 / 36753 / 36715 / 36724 / 36713 / 36618 / rps2
AAAAGA / 36872 / 36827 / 36789 / 36798 / 36787 / 36692 / rps2
GTTGTT / 36934 / 36889 / 36851 / 36860 / 36849 / 36754 / rps2
AAAAAG / 37007 / 36962 / 36924 / 36933 / 36922 / 36827 / rps2
AGAAAA / 37040 / 36995 / 36957 / 36966 / 36955 / 36860 / rps2
CTCCCT / 37063 / 37018 / 36980 / 36989 / 36978 / 36883 / rps2
TTGTTT / 37115 / 37070 / 37032 / 37041 / 37030 / 36935 / rps2
TGTTTT / 37151 / 37106 / 37068 / 37077 / 37066 / 36971 / rps2
AACAAA / 37166 / 37121 / 37083 / 37092 / 37081 / 36986 / rps2
GGGGGA / 37309 / 37264 / 37226 / 37235 / 37224 / 37129 / rps4
GGGGGA / 37315 / 37270 / 37232 / 37241 / 37230 / 37135 / rps4
AAAACA / 3737466 / 37421 / 37383 / 37392 / 37381 / 37286 / rps4
TTTTGT / 37499 / 37454 / 37416 / 37425 / 37414 / 37319 / rps4
AGAAAA / 37570 / 37525 / 37487 / 37496 / 37485 / 37390 / rps4
AAAATA / 37577 / 37532 / 37494 / 37503 / 37492 / 37397 / rps4
Polymorphism mutationa / P. infestans / P. phaseoli / P. andina Ic / P.
andina
Ia / P. ipomoeae / P. mirabilis / Gene
TTGTTT / 37666 / 37621 / 37583 / 37592 / 37581 / 37486 / orf100
AAAAAT / 37707 / 37662 / 37624 / 37633 / 37622 / 37527 / orf100
CTTCTT / 37709 / 37664 / 37626 / 37635 / 37624 / 37529 / orf100
ACAAAA / 37782 / 37737 / 37699 / 37708 / 37697 / 37602 / orf100
TTTTTA / 37857 / 37812 / 37774 / 37783 / 37772 / 37677 / orf100
GAAGAA / 37861 / 37816 / 37778 / 37787 / 37776 / 37681 / orf100
CCACCC / 37863 / 37818 / 37780 / 37789 / 37778 / 37683 / orf100
TTCTTT / 37873 / 37828 / 37790 / 37799 / 37788 / 37693 / orf100
TCTTTT / 37906 / 37861 / 37823 / 37832 / 37821 / 37726 / orf100
AAAGAA / 37954 / 37909 / 37871 / 37880 / 37869 / 37774 / orf100
aPolymorphism corresponds to the position of the nucleotide in P. infestans, P. phaseoli, P. andina(Ic), P. andina (Ia), P. ipomoeae, and P. mirabilismitochondrial genomes, respectively.
Supplemental Table 3. Amino acid changes produced fromtransitions/transversions in the mitochondrial genomes of clade 1c Phytophthora species
ACAAAA / Asp / Ala / Asp / Asp / Asp / Asp / rpl14
GGAGGG / Asp / Asp / Asn / Asp / Asp / Asp / rpl5
CTCCCC / Leu / Phe / Leu / Leu / Leu / Leu / rpl5
CAACCA / Ala / Glu / Glu / Ala / Ala / Glu / rpl5
AGAAAA / Lys / Gly / Lys / Lys / Lys / Lys / rpl5
TTTTTA / Leu / Leu / Leu / Leu / Leu / Ile / orf79
TTCCAT / Phe / Phe / Phe / Phe / Leu / Phe / orf79
CTTCTT / Leu / Phe / Phe / Leu / Phe / Phe / orf79
TTTTAT / Leu / Leu / Leu / Leu / Ile / Leu / orf79
CCTCTC / Thr / Thr / Met / Thr / Met / Thr / orf79
GGGGAG / Asp / Asp / Asp / Asp / Asn / Asp / cox2
CTCCCC / Pro / Ser / Pro / Pro / Pro / Pro / cox2
TCCTCC / Ile / Thr / Thr / Ile / Thr / Thr / cox2
GGAGGG / Val / Val / Ile / Val / Val / Val / cox2
GGGGGA / Asp / Asp / Asp / Asp / Asp / Asn / cox2
GGGGGA / Val / Val / Val / Val / Val / Ile / cox2
TTTTGT / Val / Val / Val / Val / Gly / Val / orf32
CCACCC / Phe / Phe / Leu / Phe / Phe / Phe / orf32
TATTTT / Asn / Lys / Asn / Asn / Asn / Asn / cox1
ACAAAA / Lys / Gln / Lys / Lys / Lys / Lys / cox1
AGGAGG / Ile / Val / Val / Ile / Val / Val / cox1
CTCCCC / Ala / Val / Ala / Ala / Ala / Ala / cox1
CACCCC / Thr / Asn / Thr / Thr / Thr / Thr / cox1
TTTCTT / Ile / Ile / Ile / Thr / Ile / Ile / atp9
TATTTT / Phe / Leu / Phe / Phe / Phe / Phe / nad9
CTCCCC / Thr / Ile / Thr / Thr / Thr / Thr / nad9
GGTGGG / Ala / Ala / Ser / Ala / Ala / Ala / nad9
GGGGGA / Val / Val / Val / Val / Val / Ile / cob
TTTTCT / Phe / Phe / Phe / Phe / Ser / Phe / cob
GAGGGG / Val / Ile / Val / Val / Val / Val / cob
AGCAGG / Ile / Val / Leu / Ile / Val / Val / cob
CCCCTC / Thr / Thr / Thr / Thr / Ile / Thr / cob
ACAAAA / Ile / Leu / Ile / Ile / Ile / Ile / cob
TTTTGT / Ser / Ser / Ser / Ser / Ala / Ser / cob
AAGAAA / Asn / Asn / Ser / Asn / Asn / Asn / atp1
GGAGGG / Arg / Arg / Lys / Arg / Arg / Arg / atp1
CCCCCT / Thr / Thr / Thr / Thr / Thr / Ile / atp1
GGGGAG / Asp / Asp / Asp / Asp / Asn / Asp / atp1
CCTCCC / Ser / Ser / Leu / Ser / Ser / Ser / atp1
GAGGGG / Val / Ile / Val / Val / Val / Val / nad4
AAAACA / Ile / Ile / Ile / Ile / Leu / Ile / nad4
AAGAAA / Lys / Lys / Arg / Lys / Lys / Lys / nad4
AAAAAG / Thr / Thr / Thr / Thr / Thr / Ala / nad4
Polymorphism / P. infestans / P. phaseoli / P. andina (Ic) / P. andina (Ia) / P. ipomoeae / P. mirabilis / Gene
GGTGGG / Gly / Gly / Cys / Gly / Gly / Gly / nad4
TATTTT / Ser / Thr / Ser / Ser / Ser / Ser / orf142
TCCTCC / Ile / Thr / Thr / Ile / Thr / Thr / orf142
GAGGGG / Asp / Asn / Asp / Asp / Asp / Asp / orf142
TTTTTG / Ile / Ile / Ile / Ile / Ile / Met / nad7
AGGGGG / Ile / Val / Val / Val / Val / Val / nad2
GGGGTG / Ala / Ala / Ala / Ala / Ser / Ala / nad2
GAGGGG / Ala / Thr / Ala / Ala / Ala / Ala / nad2
GGTGGG / Val / Val / Leu / Val / Val / Val / nad2
AATAAA / Asn / Asn / Tyr / Asn / Asn / Asn / nad2
CCTCCC / Leu / Leu / Phe / Leu / Leu / Leu / nad2
TCTTTT / Ile / Thr / Ile / Ile / Ile / Ile / nad2
ACCACC / Tyr / Ser / Ser / Tyr / Ser / Ser / nad2
GAGGGG / Val / Ile / Val / Val / Val / Val / nad2
AAAAAG / Ile / Ile / Ile / Ile / Ile / Val / nad2
AAAACA / Asn / Asn / Asn / Asn / Thr / Asn / rps10
CTCCCC / Thr / Ile / Thr / Thr / Thr / Thr / rps10
AAAAAG / Asn / Asn / Asn / Asn / Asn / Asp / rps10
CTCCCC / Ala / Val / Ala / Ala / Ala / Ala / rps7
AGAAAA / Gln / Arg / Gln / Gln / Gln / Gln / rps7
GGAGGG / Asp / Asp / Asn / Asp / Asp / Asp / rps7
GAGGGG / Ser / Asn / Ser / Ser / Ser / Ser / rps7
CCCCAC / Gln / Gln / Gln / Gln / Lys / Gln / cox3
ACAAAA / Leu / Phe / Leu / Leu / Leu / Leu / cox3
GAGGGG / Gly / Ser / Gly / Gly / Gly / Gly / cox3
ATCACC / Leu / Phe / Phe / Leu / Phe / Phe / cox3
GAGGGG / Val / Ile / Val / Val / Val / Val / atp6
GGAGGG / Gly / Gly / Ser / Gly / Gly / Gly / atp6
CTCCCC / Ala / Val / Ala / Ala / Ala / Ala / atp6
CCTCCC / Thr / Thr / Ile / Thr / Thr / Thr / atp6
GAGGGG / Met / Ile / Met / Met / Met / Met / atp6
CTCCCC / Ser / Leu / Ser / Ser / Ser / Ser / nad3
GGAGGG / Asp / Asp / Asn / Asp / Asp / Asp / nad3
GAGGGG / Val / Ile / Val / Val / Val / Val / nad3
AGAAAA / Thr / Ala / Ile / Thr / Thr / Thr / nad5
ACAAAA / Ile / Leu / Ile / Ile / Ile / Ile / nad5
AAAAAC / Ile / Ile / Ile / Ile / Ile / Leu / nad5
GGAGGG / Arg / Arg / Lys / Arg / Arg / Arg / nad5
AGAAAA / Lys / Glu / Lys / Lys / Lys / Lys / nad5
GTGGGG / Met / Ile / Met / Met / Met / Met / nad5
GAGGAG / Val / Ile / Val / Val / Ile / Val / nad5
AAAAAG / Ile / Ile / Ile / Ile / Ile / Val / nad5
AAAAGA / Ile / Ile / Ile / Ile / Val / Ile / nad5
TTTTCT / Ser / Ser / Ser / Ser / Pro / Ser / nad5
CCTCCC / Ala / Ala / Val / Ala / Ala / Ala / nad6
Polymorphism / P. infestans / P. phaseoli / P. andina (Ic) / P. andina (Ia) / P. ipomoeae / P. mirabilis / Gene
CCTCCC / Thr / Thr / Ile / Thr / Thr / Thr / nad6
TTTTTA / Ser / Ser / Ser / Ser / Ser / Thr / nad6
GGAGGG / Val / Val / Ile / Val / Val / Val / nad6
TTTTAT / Ile / Ile / Ile / Ile / Phe / Ile / nad4L
GAAGGG / Val / Ile / Ile / Val / Val / Val / nad1
GAGGGG / Gly / Ser / Gly / Gly / Gly / Gly / nad1
GAGGGG / Val / Ile / Val / Val / Val / Val / nad1
CCTCCC / Ala / Ala / Val / Ala / Ala / Ala / nad11
AAAACA / Asn / Asn / Asn / Asn / Thr / Asn / nad11
TTTTGT / Phe / Phe / Phe / Phe / Val / Phe / nad11
AAAATA / Ile / Ile / Ile / Ile / Leu / Ile / nad11
CTCCCC / Pro / Ser / Pro / Pro / Pro / Pro / nad11
GGAGGG / Gly / Gly / Ser / Gly / Gly / Gly / nad11
CTCCCC / Ala / Val / Ala / Ala / Ala / Ala / nad11
GAGGGG / Asp / Asn / Asp / Asp / Asp / Asp / nad11
AAAAGA / Glu / Glu / Glu / Glu / Gly / Glu / nad11
AAGAAA / Lys / Lys / Arg / Lys / Lys / Lys / nad11
TCTTTT / Leu / Ser / Leu / Leu / Leu / Leu / nad11
TCTTTT / Ile / Thr / Ile / Ile / Ile / Ile / nad11
ACAAAA / Lys / Asn / Lys / Lys / Lys / Lys / nad11
AGAAAA / Ile / Val / Ile / Ile / Ile / Ile / nad11
GAGGGG / Gly / Ser / Gly / Gly / Gly / Gly / nad11
GGGGGA / Asp / Asp / Asp / Asp / Asp / Asn / nad11
GGTGGG / Ala / Ala / Ser / Ala / Ala / Ala / nad11
TCTTTT / Phe / Ser / Phe / Phe / Phe / Phe / nad11
AAAACA / Lys / Lys / Lys / Lys / Thr / Lys / nad11
CCTCCC / Ser / Ser / Phe / Ser / Ser / Ser / nad11
TTTTCT / Phe / Phe / Phe / Phe / Leu / Phe / nad11
TTTTAT / Leu / Leu / Leu / Leu / Ile / Leu / nad11
TTTATT / Ile / Ile / Ile / Asn / Ile / Ile / nad11
GAGGGG / Ser / Asn / Ser / Ser / Ser / Ser / nad11
ACCACC / Ile / Leu / Leu / Ile / Leu / Leu / ymf16
TTTTTA / Phe / Phe / Phe / Phe / Phe / Tyr / ymf16
CCCCCA / Thr / Thr / Thr / Thr / Thr / Lys / ymf16
GAAGAA / Val / Ile / Ile / Val / Ile / Ile / ymf16
GAGGGG / Asp / Asn / Asp / Asp / Asp / Asp / ymf16
TCTTTT / Ile / Thr / Ile / Ile / Ile / Ile / ymf16
GGGGGA / Val / Val / Val / Val / Val / Ile / rps11
AAAATA / Lys / Lys / Lys / Lys / Ile / Lys / rps11
TATTTT / Asn / Lys / Asn / Asn / Asn / Asn / rps11
CCACCC / Leu / Leu / Ile / Leu / Leu / Leu / rps11
GATGAG / Val / Ile / Leu / Val / Ile / Val / rps13
GGTGGG / Gln / Gln / His / Gln / Gln / Gln / rps13
CCCCCA, TTTTTG / Ala / Ala / Ala / Ala / Ala / Glu / rps13
AAAAAC / Lys / Lys / Lys / Lys / Lys / Gln / rps13
Polymorphism / P. infestans / P. phaseoli / P. andina (Ic) / P. andina (Ia) / P. ipomoeae / P. mirabilis / Gene
CTCCCC / Arg / Cys / Arg / Arg / Arg / Arg / rps13
GAGGGG / Arg / Lys / Arg / Arg / Arg / Arg / rpl2
CTCCCC / His / Tyr / His / His / His / His / rpl2
TTTTGT / Asn / Asn / Asn / Asn / Lys / Asn / rps3
GGGGCG / Glu / Glu / Glu / Glu / Gln / Glu / rps3
AAAAAC / Asn / Asn / Asn / Asn / Asn / Thr / rps3
TATTTT / Asn / Lys / Asn / Asn / Asn / Asn / rps3
GAGGGG / Arg / Lys / Arg / Arg / Arg / Arg / rps3
ATTATT / Asn / Ile / Ile / Asn / Ile / Ile / rps3
CAACAA / Asp / Glu / Glu / Asp / Glu / Glu / rps3
GAGGGG / Val / Ile / Val / Val / Val / Val / rpl16
CTCCCC / Thr / Ile / Thr / Thr / Thr / Thr / rpl16
GAGGGG / Val / Ile / Val / Val / Val / Val / rpl16
AACAAA / Lys / Lys / Gln / Lys / Lys / Lys / orf217
CCCCAC / Gln / Gln / Gln / Gln / Lys / Gln / orf217
AGAAAA / Glu / Gly / Glu / Glu / Glu / Glu / orf217
AAAACA / Asp / Asp / Asp / Asp / Ala / Asp / orf217
GTGGGG / Glu / Asp / Glu / Glu / Glu / Glu / orf217
AAAAAG / Asn / Asn / Asn / Asn / Asn / Asp / orf217
CCTCCC / Ser / Ser / Phe / Ser / Ser / Ser / orf217
CCTCCC / Pro / Pro / Ser / Pro / Pro / Pro / orf217
GTAGGG / Val / Phe / Ile / Val / Val / Val / orf217
ATTATT / Asn / Phe / Phe / Asn / Phe / Phe / orf217
AAAAGA / Lys / Lys / Lys / Lys / Arg / Lys / orf217
AAAACA / Lys / Lys / Lys / Lys / Thr / Lys / orf217
AAAACA / Ser / Ser / Ser / Ser / Arg / Ser / orf217
AAAAAT / Asn / Asn / Asn / Asn / Asn / Ile / atp8
GGAGGG / Glu / Glu / Lys / Glu / Glu / Glu / atp8
CTCCCC / Ser / Leu / Ser / Ser / Ser / Ser / atp8
TTCTCC / Tyr / Tyr / His / Tyr / His / His / atp8
CCTCAC, TTTTAT / Thr / Thr / Ile / Thr / Lys / Thr / atp8
TTTTGT / Leu / Leu / Leu / Leu / Val / Leu / atp8
ATAAAA / Ile / Tyr / Ile / Ile / Ile / Ile / atp8
GAGGGG / Ser / Asn / Ser / Ser / Ser / Ser / atp8
AGAAAA / Gln / Arg / Gln / Gln / Gln / Gln / atp8
AAAAGA / Lys / Lys / Lys / Lys / Arg / Lys / rps14
GGGGAG / Asp / Asp / Asp / Asp / Asn / Asp / rps14
GGAGGG / Val / Val / Ile / Val / Val / Val / rps14
GAGGGG / Ala / Thr / Ala / Ala / Ala / Ala / rps14
CCCCCT / Thr / Thr / Thr / Thr / Thr / Ile / rps8
ACAAAA / Ile / Leu / Ile / Ile / Ile / Ile / rps8
AATAAA / Leu / Leu / Phe / Leu / Leu / Leu / rpl6
AGAAAA / Lys / Glu / Lys / Lys / Lys / Lys / rp16
AAGAAA / Asn / Asn / Ser / Asn / Asn / Asn / rp16
CAACAA / Thr / Lys / Lys / Thr / Lys / Lys / rpl6
Polymorphism / P. infestans / P. phaseoli / P. andina (Ic) / P. andina (Ia) / P. ipomoeae / P. mirabilis / Gene
CCCCTC / Thr / Thr / Thr / Thr / Ile / Thr / rp16
AGGAGG / Asn / Asp / Asp / Asn / Asp / Asp / rpl6
AGAAAA / Ile / Val / Ile / Ile / Ile / Ile / rpl6
AAACAA / Leu / Leu / Leu / Phe / Leu / Leu / rp16
GAAGGG / Gly / Ser / Ser / Gly / Gly / Gly / rp16
CTCCCC / Leu / Phe / Leu / Leu / Leu / Leu / rpl6
AAAAAC / Asn / Asn / Asn / Asn / Asn / His / rpl6
CCCCCT / Thr / Thr / Thr / Thr / Thr / Ile / rp16
ACAAAA / Lys / Gln / Lys / Lys / Lys / Lys / rps2
AGAAAA / Asn / Ser / Asn / Asn / Asn / Asn / rps2
GAGGGG / Asp / Asn / Asp / Asp / Asp / Asp / rps2
AAAAAC / Lys / Lys / Lys / Lys / Lys / Gln / rps2
GTTGTT / Arg / Met / Met / Arg / Met / Met / rps2
CTCCCT / Thr / Ile / Thr / Thr / Thr / Ile / rps2
TTGTTT / Ile / Ile / Met / Ile / Ile / Ile / rps2
AACAAA / Leu / Leu / Phe / Leu / Leu / Leu / rps2
GAGGGG / Arg / Lys / Arg / Arg / Arg / Arg / rps4
GAGGGG / Arg / Gln / Arg / Arg / Arg / Arg / rps4
AAAAAG / Lys / Lys / Lys / Lys / Lys / Arg / rps4
TTGTTT / Asn / Asn / Lys / Asn / Asn / Asn / orf100
ATAAAA / His / Leu / His / His / His / His / orf100
CTTCTT / Leu / Phe / Phe / Leu / Phe / Phe / orf100
AAAAAC / Asn / Asn / Asn / Asn / Asn / Thr / orf100
TATTTT / Ile / Lys / Ile / Ile / Ile / Ile / orf100
CCACCC / Thr / Thr / Lys / Thr / Thr / Thr / orf100
aPolymorphism corresponds to the position of the amino acid in P. infestans, P. phaseoli, P. andina(Ic), P. andina (Ia),P. ipomoeae, and P. mirabilismitochondrial genome, respectively.