Supplemental Data. Böhlenius Et Al. Plant Cell. (2010).10.1105/Tpc.110.078063
Supplemental Data. Böhlenius et al. Plant Cell. (2010).10.1105/tpc.110.078063
#NEXUS
[ Title fig1]
begin taxa;
dimensions ntax= 36;
taxlabels
Sc Ypt51p
At ARFA1a
At ARFA1b
At ARFA1e
At ARFA1d
At ARFA1c
At ARFA1f
At ARFB1a
At ARFB1b
At ARFB1c
At ARFC1
At ARFD1a
At ARFD1b
At ARLA1a
At ARLA1b
At ARLA1c
At ARLA1d
At ARLB1
At ARLC1
At SARA1a
At SARA1b
At SARA1c
Hv ARFA1a
Hv ARFA1c
Hv ARFA1b
Hv ARFA1d
Hv ARFB1b
Hv ARFB1c
Hv ARFC
Hv ARFC1
Hv SALA1a
Hv SALA1b
Hv ARLC1
Hv SARA1b
Hv SARA1a
Hv SARA1c
;
end;
begin characters;
dimensions nchar= 247;
format missing=? gap=- matchchar=. datatype=protein interleave=yes;
matrix
[!Domain=Data;]
Sc Ypt51p ------MNTSVTSIKLVLLGEAAVGKSSIVLRFVSNDFAEN------KEPTIGAA
At ARFA1a ---MGLSFAKLFSRLFAKKEMRILMV.LD.A..TT.LYKLKLGEIVT------TI....--
At ARFA1b ---MGLNFTKLFSRLFAKKEMRILMV.LD.A..TT.LYKLKLGEIVT------TI....--
At ARFA1e ---MGLSFGKLFSRLFAKKEMRILMV.LD.A..TT.LYKLKLGEIVT------TI....--
At ARFA1d ---MGLSFAKLFSRLFAKKEMRILMV.LD.A..TT.LYKLKLGEIVT------TI....--
At ARFA1c ---MGLSFGKLFSKLFAKKEMRILMV.LD.A..TT.LYKLKLGEIVT------TI....--
At ARFA1f ---MGLSFAKLFSRLFAKKEMRILMV.LD.A..TT.LYKLKLGEIVT------TI....--
At ARFB1a ---MGARFSRIAKRFLPKSKVRILMV.LDGS..TT.LYKLKLGEVVT------TV....--
At ARFB1b ---MGQAFRKLFDTFFGNQEMRV.M..LD.A..TT.LYKLHIGEVLS------TV....--
At ARFB1c ---MGQTFRKLFDTFFGNQEMRV.M..LD.A..TT.LYKLHIGEVLS------TV....--
At ARFC1 ---MGAFMSRFWF.MFPAKEY.I.VV.LDNA..TTTLYKLHLGEVVT------TH..V.--
At ARFD1a ---MGTTLGKPFAGFFHQEEARI..F.LGGT.....MHK.KTGETLTT------TM..V.--
At ARFD1b ------MHKLKTGETLTT------TM....--
At ARLA1a -MGLWDSLLNWLRSLFFKQEME.S.V.LQNA..T.L.NAIATGGYS.D------MI..V.--
At ARLA1b ------ME.S.V.LQNS..T.L.NVVATGEYS.D------MI..V.--
At ARLA1c -MGLLEAFLNWLRSLFFKQEME.S.I.LQNA..T.L.NVVATGGYS.D------MI..V.--
At ARLA1d -MGLWDALLNWLRSLFFKQEME.S.I.LQNA..T.L.NVVATGGYS.D------MI..V.--
At ARLB1 ---MFSLMSGLWSYMF.K.EFNVLI..IDKA..TTFLEKLKTIYSISEGLPHDRIV..V.--
At ARLC1 ---MG-LLSIIRKIKKKEKEMRILMV.LDNS..TT...KIN-GEDTSV------IS..L.--
At SARA1a MFLFDWFYGILASLGLCKKEA.ILF..LDNA..TTLLHMLKDERLVQ------HQ..QH--
At SARA1b MFLFDWFYGILASLGLWQKEA.ILF..LDNA..TTLLHMLKDERLVQ------HQ..QH--
At SARA1c MFMIDWFYGVLASLGLWQKEA.ILF..LDNA..TTLLHMLKDERLVQ------HQ..QH--
Hv ARFA1a ---MGLAFGKLFSRLFAKKEMRILMV.LD.A..TT.LYKLKLGEIVT------TI....--
Hv ARFA1c ---MGLTFTKLFSRLFAKKEMRILMV.LD.A..TT.LYKLKLGEIVT------TI....--
Hv ARFA1b ---MGLTFTKLFSRLFAKKEMRILMV.LD.A..TT.LYKLKLGEIVT------TI....--
Hv ARFA1d ---MGLSFGTLFGALFAKKEMRILMV.LD.A..TT.LYKLKLGEIVT------TI....--
Hv ARFB1b ---MGQAFRKLFDAFFGNKEMRV.M..LD.A..TT.LYKLHIGEVLS------TV....--
Hv ARFB1c ---MGQAFRKLFDAFFGNSEMRV.M..LD.A..TT.LYKLHIGEVLS------TV....--
Hv ARFC ---MGIVFTRLFSSVFGNREARILV..LDNA..TT.LY.LQMGEVVS------TI....--
Hv ARFC1 ---MGAWMSRVWFLMFPAKEY.I.VV.LDNA..TTTLYKLHLGEAVT------AA....--
Hv SALA1a -MGLWDSLLNWLRSLFFKQEME.S.V.LQNA..T.L.NSIATGGYS.D------MI..V.--
Hv SALA1b -MGFWEAFLNWLRSLFFKQEME.S.I.LQNA..T.L.NVIATGG.S.D------MI..V.--
Hv ARLC1 ---MG-LLSIIRKIKRKEKEMRILMV.LDNS..TT...KIN-GEDTSV------IS..L.--
Hv SARA1b MFLWDWFYGVLASLGLWQKEA.ILF..LDNA..TTLLHMLKDERLVQ------HQ..QH--
Hv SARA1a MFLVDWFYGVLASLGLWQKEA.ILF..LDNA..TTLLHMLKDERLVQ------HQ..QY--
Hv SARA1c MFLVDWFYGVLASLGLWQKEA.ILF..LDNA..TTLLHMLKDERLVQ------HQ..QY--
Sc Ypt51p FLTQRVTINEHTVKFEIWDTAGQERFA--SLAPMYYRNAQAALVVYDVTKPQSFIKARHWVK
At ARFA1a --FNVE.VEYKNIS.TV..VG..DKIR--P.WRH.FQ.T.GLIF.V.SNDRDRVVE..DELH
At ARFA1b --FNVE.VEYKNIS.TV..VG..DKIR--P.WRH.FQ.T.GLIF.V.SNDRDRVVE..DELH
At ARFA1e --FNVE.VEYKNIS.TV..VG..DKIR--P.WRH.FQ.T.GLIF.V.SNDRDRVVE..DELH
At ARFA1d --FNVE.VEYKNIS.TV..VG..DKIR--P.WRH.FQ.T.GLIF.V.SNDRDRVVE..DELH
At ARFA1c --FNVE.VEYKNIS.TV..VG..DKIR--P.WRH.FQ.T.GLIF.V.SNDRDRVVE..DELH
At ARFA1f --FNVE.VEYKNIS.TV..VG..DKIR--P.WRH.FQ.T.GLIF.V.SNDRDRVVE..DELH
At ARFB1a --FNLE.VEYKGIN.TV..IG...KIR--K.WRH.FQ...GLIF.V.SSDSERLSE..NELH
At ARFB1b --FNVEKVQYKN.M.TV..VG...KLR--P.WRH.FN.TDGLIY.V.SLDRERIG..KQEFQ
At ARFB1c --FNVEKVQYKN.I.TV..VG...KLR--P.WRH.FN.TDGLIY.V.SLDRERIG..KQEFQ
At ARFC1 --SNVEELVYKNIR..V..LG..D.LR--TSWAT...GTH.VI..I.S.DRARISFMKDELA
At ARFD1a --LNVESVKYKDSNLCF.EMG..QCYMWFP.WKHWFQEIAGLVL.V.S.GRDQIEETKDFLN
At ARFD1b --.DVESVKYKDSNLRF.EMG..QCYKWFPMTKHDFQEIAGLVL.V.S.DRDRIED.KDFLN
At ARLA1a --FNMRKVTKGN.TIK...LG..R..R--TMWER.C.GVS.IVY.I.AADRD.VPIS.SELN
At ARLA1b --FNMRKVTKEN.AIRL..LG..P..R--CMWER.C.AVSMIVY.V.AADTENLSVS.SELH
At ARLA1c --FNMRKVTKGN.TIKL..LG..P..R--.MWER.C.AVS.IVY.V.AAD.DNLSVSKSELH
At ARLA1d --FNMRKVTKGS.TIKL..LG..P..R--.MWER.C.SVS.IVY.V.AAD.DNLSVSKSELH
At ARLB1 --LNIGR.EVSNA.IVF..LG..PGLR--.IWEK..EE.H.LIYLI.AAC.TR.EDSKSALE
At ARLC1 --FNIK..IYQKYTLN...VG..KTIR--.YWRN.FEQTDGLVW.V.SSDLRRLDDCKMELD
At SARA1a --PTSEELSIGKIN.KAF.LG.HQIAR--RVWKDC.AKVD.VVYLV.AYDRDR.VESKRELD
At SARA1b --PTSEELSIGKI..KAF.LG.HQIAR--RVWKD..AKVD.VVYLV.AYDKER.AESKRELD
At SARA1c --PTSEELSIGKI..KAF.LG.HQIAR--RVWKD..AKVD.VVYLV.AYDKER.AESKKELD
Hv ARFA1a --FNVE.VEYKNIS.TV..VG..DKIR--P.WRH.FQ.T.GLIF.V.SNDRDRVVE..DELH
Hv ARFA1c --FNVE.VEYKNIS.TV..VG..DKIR--P.WRH.FQ.T.GLIF.V.SNDRERVVE..DELH
Hv ARFA1b --FNVE.VEYKNIS.TV..VG..DKIR--P.WRH.FQ.T.GLIF.V.SNDRERVVE..DELH
Hv ARFA1d --FNVE.VEYKNIS.TV..VG..DKIR--P.WRH.FQ.T.GLIF.V.SNDRDRIAE..DELH
Hv ARFB1b --FNVEKVQYKN.V.TV..VG...KLR--P.WRH.FN.TD.LIY.V.SLDRDRIGR..AEFQ
Hv ARFB1c --FNVEKVQYKN.L.TV..VG...KLR--P.WRH.FN.TDGLIY.V.SLDRERIG..KAEFQ
Hv ARFC --FNVE.VQYNNI..QV..LG..TSIR--PYWRC.FP.T..IIY.V.SSDTDRLVT.KEEFH
Hv ARFC1 --SNVEEVVFKNIR..V..LG...SLR--TSWAT...GTH.VI..I.S.DRSRINIIKDELF
Hv SALA1a --FNMRKVTKGN.TIKL..LG..R..R--TMWER.C.GVT.I.Y.V.AADRD.VPI.KSELH
Hv SALA1b --FNMRKVTKGN.TIKL..LG..P..R--.MWER.C.AVS.IVY.V.AADRENMAI.KSELH
Hv ARLC1 --FNIK..QYQKYSLN...VG..KTIR--.YWRN.FEQTDGLVW.V.SSDVRRLDDC.AELH
Hv SARA1b --PTSEELSIGKI..KAF.LG.HQIAR--RVWKD..ARVD.VVYLV.AYDKER.TESKKELD
Hv SARA1a --PTSEELSIGQI..KTF.LG.HQIAR--RVWKD..AKVD.VVYLV.AADKER.AESKKELD
Hv SARA1c --PTSEELSIGKI..KAF.LG.HQIAR--RVWKD..AKVD.VVYLV.AYDKER.AESKKELD
Sc Ypt51p ELHEQAS----KDIIIALVGNKIDMLQEGGERKVAREEGEKLAE------EKGLLF
At ARFA1a RMLNEDE---LR.AVLLVFA..Q.LPNAMNAAEITDKL.LHSLR------QRHWYI
At ARFA1b RMLNEDE---LR.AVLLVFA..Q.LPNAMNAAEITDKL.LHSLR------QRHWYI
At ARFA1e RMLNEDE---LR.AVLLVFA..Q.LPNAMNAAEITDKL.LHSLR------QRHWYI
At ARFA1d RMLNEDE---LR.AVLLVFA..Q.LPNAMNAAEITDKL.LHSLR------QRHWYI
At ARFA1c RMLNEDE---LR.AVLLVFA..Q.LPNAMNAAEITDKL.LHSLR------QRHWYI
At ARFA1f RMLNEDE---LR.AVLLVFA..Q.LPNAMNAAEITDKL.LHSLR------QRHWYI
At ARFB1a RILTDNE---LEGACVLVFA..Q.SRNALPVAE..NKL.LHSLS------KRCW.I
At ARFB1b .IIKDPF---MLNS..LVFA..Q..RGAMSP.E.CEGL.LFDLK------NRKWHI
At ARFB1c DIIRDPF---MLNSV.LVFA..Q..RGAMSP.E.CEGL.LLDLK------NRKWHI
At ARFC1 R.LGHED---LQNSV.LVFA..Q.LKDAMTPAEITDALNLHSIK------NHDWHI
At ARFD1a VVIDEIQGSVPDNAPVLVY...HEVPGAMSASEISNKLDLTSLRKKNW------QRNWHV
At ARFD1b AVIDEIQGSVPDNVAVLVF...HEVPGAMSASEISNKLDLTSLRQKNW------QRNWHV
At ARLA1a D.LTKP.---LNG.PLLIL.....KSEALSKQALVDQL.LESVT------DREVCC
At ARLA1b D.LSN..---LIG.PLLVL.....IHGALSKEALTE.M.LSSVT------SREVCC
At ARLA1c D.LSKT.---LNG.PLLVL.....KPGALSKEALTD.M.LTSLT------DREVCC
At ARLA1d D.LSKT.---LNG.PLLVL.....KPGALSKEALTD.M.L.SLT------DREVCC
At ARLB1 KALRHED---LQGAPLLILA..Q.LTNAVSAEELD.YLDL.KLD------.RVYM.
At ARLC1 N.LKEER---LAGSSLLILA..Q.IQGALTPDEIGKVLNLESMDK------SRHWKI
At SARA1a A.LSDEA---LANVPCLIL.....IPYASS.DELRYYL.LTNFTTGKGIVNLEDSGVRP.EV
At SARA1b A.LSDEA---LATVPFLIL.....IPYAAS.DELRYHL.LTNFTTGKGKVTLGDSGVRP.EV
At SARA1c A.LSDE.---LASVPFLIL.....IPYAAS.DELRYHL.LSNFTTGKGKVNLTDSNVRP.EV
Hv ARFA1a RMLNEDE---LR.AVLLVFA..Q.LPNAMNAAEITDKL.LHSLR------QRHWYI
Hv ARFA1c RMLNEDE---LR.AVLLVFA..Q.LPNAMNAAEITDKL.LHSLR------QRHWYI
Hv ARFA1b RMLNEDE---LR.AVLLVFA..Q.LPNAMNAAEITDKL.LHSLR------QRHWYI
Hv ARFA1d RMLNEDE---LRNAVLLVFA..Q.LPNAMNAAEITDKL.LHSLR------QRHWYI
Hv ARFB1b AIINDPF---MLNSVLLVFA..Q..RGAMTPME.CEGL.LYDLN------NRIWHI
Hv ARFB1c AIINDPF---MLNSV.LVFA..Q..KGAMTPME.CEGL.LYDLK------NRMWHI
Hv ARFC SIL.EDE---L.GAVVLVYA..Q.LPGALDDAAITESLELHKIK------SRQWAI
Hv ARFC1 R.IQH.D---LDNTAVLVFA..Q.LKDAMSAAEITDALSLHSIK------NRDWHI
Hv SALA1a D.LTKQ.---LSG.PLLIL.....KSEALSKPALVDQL.LESIK------DREVCC
Hv SALA1b D.LSKP.---LTG.PLLVI.....KPEAFPKQSFTEVM.L.AMT------DREVAC
Hv ARLC1 N.LKEER---LAGSSLLVFA..Q.IQGALKPDEI.KVLNLEVMNK------DRHWKI
Hv SARA1b A.LSDD.---LANVPFLIL.....IPYAAS.EELRYHL.LSNFTTGKGKVNLVDSNVRP.EV
Hv SARA1a G.LSDD.---LANVPFLVL.....IPIAAS.EELRYYL.LSNFTTGKGNVNLSDSNVRP.EV
Hv SARA1c A.LSDD.---LATVPFLIL.....IPYAAS.EELRYHL.LSNFTTGKGKVSLSESNVRP.EV
Sc Ypt51p FETSAKTGENVNDVFLGIGEKIPLKTAEEQNSASNERESNNQRVDLNAANDGTSANSACSC
At ARFA1a QS.C.TS..GLYEGLDWLSNN.AG.A*------
At ARFA1b QS.C.TS..GLYEGLDWLSNN.AT.VNNLNIPF*------
At ARFA1e QS.C.TS..GLYEGLDWLSNN.AS.A*------
At ARFA1d QS.C.TS..GLYEGLDWLSNN.AG.A*------
At ARFA1c QS.C.TS..GLYEGLDWLSNN.AN.A*------
At ARFA1f QS.C.TS..GLYEGLDWLSNN.AS.A*------
At ARFB1a QG...IS.QGLYEGLEWLSTT..N.PERSTSVS.FRSD.YERKLVRGPRY*------
At ARFB1b QG.C.LR.DGLYEGLDWLSSTLKDVK.AGFT.VGHSF*------
At ARFB1c QG.C.LQ.DGLYEGLDWLSATLKEVK.AGYS.VGPSF*------
At ARFC1 QASC.V...GLY.GLGW.AQ.VTG.ATS*------
At ARFD1a QSSC.FS.DGLHEGLDWLLKNAERM*------
At ARFD1b QSSC.FS.DGLHEGLDWLLKNAERM*------
At ARLA1a YMI.C.DSI.IDA.IDWLIKHSRTA.*------
At ARLA1b LMI.C.NPTTIDQLTDWLVNHSKS.N*------
At ARLA1c .MI.C.NST.IDQ.IDWLVKHSKS.N*------
At ARLA1d .MI.C.NST.IDQ.IDWLVKHSKSSN*------
At ARLB1 EAV.GYD.RGIKESIEWLVGVMEKSKRT.SLR.RAGYTPVPNS*------
At ARLC1 VGC..Y...GLLEG.DWLVQD.ASRIYMLD*------
At SARA1a .MC.IVRKMGYGEG.KWLSQY.K*------
At SARA1b .MC.IVRKMGYGEG.KWLSQY.N*------
At SARA1c .MC.IVRKMGYGEG.KWVSQY.K*------
Hv ARFA1a QS.C.TS..GLYEGLDWLSNN.AS.A------
Hv ARFA1c QS.C.TS..GLYEGLDWLSNN.AN.A------
Hv ARFA1b QS.C.TS..GLYEGLDWLSNN.AN.A------
Hv ARFA1d QSAC.TS..GLYEGLDWLSNN.AS.S------
Hv ARFB1b QG.C.LK.DGLYEGLDWLATTLDEMR.TGRLASTSA------
Hv ARFB1c QGSC.LK.DGLYEGLDWLSSTLKDLQ.SGRLPSGGT------
Hv ARFC .K...IK..GLFEGLNWLSNALKSGSS------
Hv ARFC1 QASC.L...GLY.GMGW.AQ.VAG.ATAS------
Hv SALA1a YMI.C.DSV.IDV.MDWLIKHSKTAN------
Hv SALA1b .MI.C.NST.IDS.IDWLVKHSKK.N------
Hv ARLC1 VGC..Y..DGLLQG.DWLVQD.ASRIYVLD------
Hv SARA1b .MC.VVRKMGYG.G.KWVSQY.K------
Hv SARA1a .MC.IVRKMGYGEG.KWMSQY.K------
Hv SARA1c .MC.IVRKMGYGEG.KWMSQY.K------
;
end;
1