Supplementary Tables
Table S1 PCR primers used for semi-quantitative and quantitative RT-PCR to analyze the expression levels of rice FL-cDNAs introduced into FOX-rice lines
Line / Accession number / Forward primer (5¢-3¢) / Reverse primer (5¢-3¢)CO004 / AK065234 / caagaaatcagaaggttagcaaca / cctcaaatgtctaaggagctcaa
CO016 / AK099353 / cggcttctccgtcaacac / ccctcagcttctcctcgtt
CO032 / AK101360 / gctgcagtcaaccaaagaga / ttcggacttgtcatgtaacagc
CO035 / AK103788 / gcgtccacacatcagtgaaa / tacaggctcctcactgaacg
CO039 / AK071395 / ctggaggagacggacagg / gatccattcatagagcttttcca
CO041 / AK070663 / ggcatgctttcacgtaccat / tgatccagacatggattgattt
CO069 / AK073273 / ggactggatcaaggacatcg / gatcatgttgagctgcctga
CO071 / AK071260 / cagcatcccctccaagtg / tcgatatagctcgatcacctcac
CO078 / AK103090 / cagttatcatgattgtgggagtg / tcacctgctgccatcaatac
CO086 / AK102584 / cgaggaaaaggcacaggtaa / tctcttttgcctcagatgacac
CO099 / AK065542 / tctcgcgagcaggagaac / cgcagctttccacaaacag
CO100 / AK071882 / gagggatgctgtgcgtgt / ctcttgacctcgcccttg
CO102 / AK101790 / gcatgccatgtgtttgtttc / gcacatcaactgcagcaag
CO119 / AK103025 / tcatctgctgctgtgtctcc / ggaaggttctcagcaatggt
CO120 / AK067076 / gtgtacgaatctggagcagaga / cgagcacgctcgagtacat
CO130 / AK068980 (CO130-1) / tgcgcctcctgctcttatag / agcacggagcgagtagtacc
CO130 / AK069185 (CO130-2) / ttgatatcccgccttatgga / gtcctgcaatgccctctg
CO148 / AK069906 / gggttaggaagtctggcaatta / ccattcaatgtttggcatga
CO155 / AK101332 / tgtgacggtctacaatggtca / gccttggtaggctcaggaa
CO186 / AK070613 / gccatggtggtgaacaactt / gccaaacatattcagaggcatt
CO214 / AK071088 / tgtatcccagcagcaatgag / gatagctggagctgggtgat
CO226 / AK069142 / ggattttggagagccaacc / tctctccacattgcttttgc
CO360 / AK069578 / gtgcaggggatcatcgag / catgcactctgacacgttcttt
CP039 / AK102520 / ttacgccagcgacagctt / tcagcctctgacaaatagtcca
CP076 / AK099380 / ctatcattcctggaagggaagtt / aatcaggttttgggatcacg
BD108 / AK071961 / ccgcttgcatgcatggtgtc / cgtacaagttactctctcgg
AC214 / AK101758 / gatcgatctatccttgtgttg / catgcaggaggaggcagctc
Table S2 Altered phenotypes appearing in T0 plants of FOX-rice lines
Growth promotion / 24
Growth promotion & Sterile / 2
Growth promotion & Early heading / 1
Growth promotion & Low tillering / 1
Dwarf / 7
Dwarf & Lethal / 2
Dwarf & Sterile / 3
Dwarf & Late heading / 1
Dwarf & No heading / 17
Dwarf & Low tillering / 1
Dwarf, No heading & Low tillering / 2
Dwarf, No heading, High tillering & Narrow leaf / 2
Super-dwarf & Lethal / 2
Super-dwarf & No heading / 3
Semi-dwarf / 26
Semi-dwarf & Lethal / 1
Semi-dwarf & Sterile / 9
Semi-dwarf & Early heading / 2
Semi-dwarf & Late heading / 4
Semi-dwarf & No heading / 17
Semi-dwarf & Low tillering / 5
Semi-dwarf & High tillering / 2
Semi-dwarf & Stripe / 1
Semi-dwarf, Late heading & Sterile / 3
Semi-dwarf, Low tillering & Lethal / 1
Semi-dwarf, Low tillering & Sterile / 1
Semi-dwarf, Low tillering & No heading / 1
Semi-dwarf, Low tillering & Late heading / 1
Semi-dwarf, Low tillering, Late heading & Sterile / 1
Weak / 14
Weak & Lethal / 45
Weak & Sterile / 4
Weak & Late heading / 8
Weak & No heading / 29
Weak, No heading & Opened lamina joint / 2
Weak, Lethal & Stripe / 1
Weak, Sterile & Narrow leaf / 1
Lethal / 421
Lethal & Stripe / 1
Lethal & Lesion mimic / 1
Lethal & Pale green / 1
Sterile / 336
Sterile & Late heading / 42
Sterile & Early heading / 5
Sterile & No heading / 1
Sterile & Low tillering / 7
Late heading / 160
Late heading & Low tillering / 4
Late heading & Pale green / 1
Late heading, Low tillering & Sterile / 1
Early heading / 103
Early heading & Low tillering / 1
No heading / 112
No heading & Opened lamina joint / 1
Low tillering / 23
Low tillering & No heading / 6
High tillering / 1
Narrow leaf / 1
Pigment accumulation / 1
Erect leaf & Sterile / 1
Rolled leaf & Sterile / 1
Stripe / 7
Stripe & No heading / 1
Abnormal hull / 1
Lesion mimic / 2
Lesion mimic & Late heading / 1
Callus greening / 2
Vivipary / 1
Vivipary & Early heading / 1
Abnormal root / 1
Subtotal (A) / 1496
No obvious phenotype / 7525
Total (B) / 9021
A/B / 16.6%
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