Comparativephylogenies Ofribosomal Proteinsand the 16S Rrna Gene at Higher Ranks of The

ComparativePhylogenies ofRibosomal Proteinsand the 16S rRNA Gene at Higher Ranks of the Class Actinobacteria

Zhitang Lu§, Weiwei Zhang

Current Microbiology

§Corresponding author:

ZhitangLu.CollegeofLifeSciences,HebeiUniversity,KeyLaboratory of Microbial Diversity Research andApplicationofHebeiProvince,Baoding 071002,PR China

E-mail:

Online Resource 1Specimens included in this study.

The species listed in the table are used in the phylogenetic analysisin this study.Accession numbers for bacterial genomes and ribosomal proteinsin the RefSeq collection of NCBI are shown in thistable.

T Type species or type strains

Organism / Genome / Rpl1 / Rpl2 / Rpl3 / Rpl4 / Rpl5 / Rpl6 / Rpl7/12
Acidimicrobium ferrooxidansT DSM 10331T / NC_013124 / YP_003109029 / YP_003109042 / YP_003109039 / YP_003109040 / YP_003109051 / YP_003109054 / YP_003109031
Acidothermus cellulolyticusT 11BT / NC_008578 / YP_872056 / YP_872069 / YP_872066 / YP_872067 / YP_872078 / YP_872081 / YP_872058
Actinomyces odontolyticus ATCC 17982 / NZ_AAYI02000000 / EDN80732 / EDN79915 / EDN79918 / EDN79917 / EDN79906 / EDN79903 / EDN80739
Actinosynnema mirumT DSM 43827T / NC_013093 / YP_003104282 / YP_003104255 / YP_003104258 / YP_003104257 / YP_003104246 / YP_003104243 / YP_003104279
Aeromicrobium marinum DSM 15272T / NZ_ACLF00000000 / ZP_07718634 / ZP_07718602 / ZP_07718605 / ZP_07718604 / ZP_07718593 / ZP_07718590 / ZP_07718632
Amycolatopsis mediterranei U32 / NC_014318 / YP_003762818 / YP_003762902 / YP_003762899 / YP_003762900 / YP_003762911 / YP_003762914 / YP_003762822
Arcanobacterium haemolyticumT DSM 20595T / NC_014218 / YP_003697721 / YP_003697706 / YP_003697709 / YP_003697708 / YP_003697697 / YP_003697694 / YP_003697718
Arthrobacter arilaitensis Re117T / NC_014550 / YP_003917555 / YP_003917539 / YP_003917542 / YP_003917541 / YP_003917526 / YP_003917524 / YP_003917553
Atopobium parvulum DSM 20469T / NC_013203 / YP_003180192 / YP_003180177 / YP_003180180 / YP_003180179 / YP_003180168 / YP_003180165 / YP_003180190
Bacillus subtilis subsp. subtilisT 168 / NC_000964 / NP_387984 / NP_388000 / NP_387997 / NP_387998 / NP_388009 / NP_388012 / NP_387986
Beutenbergia cavernaeTDSM 12333T / NC_012669 / YP_002883166 / YP_002883146 / YP_002883149 / YP_002883148 / YP_002883137 / YP_002883134 / YP_002883162
Bifidobacterium adolescentis ATCC 15703T / NC_008618 / YP_909111 / YP_909187 / YP_909184 / YP_909185 / YP_909196 / YP_909199 / YP_909148
Brachybacterium faeciumTDSM 4810T / NC_013172 / YP_003155779 / YP_003155760 / YP_003155763 / YP_003155762 / YP_003155750 / YP_003155747 / YP_003155777
Brevibacterium mcbrellneri ATCC 49030T / NZ_ADNU00000000 / ZP_06806651 / ZP_06804570 / ZP_06804573 / ZP_06804572 / ZP_06804561 / ZP_06804559 / ZP_06806655
Catenulispora acidiphilaT DSM 44928T / NC_013131 / YP_003111685 / YP_003111707 / YP_003111704 / YP_003111705 / YP_003111716 / YP_003111719 / YP_003111689
Cellulomonas flavigenaT DSM 20109T / NC_014151 / YP_003637761 / YP_003637742 / YP_003637745 / YP_003637744 / YP_003637733 / YP_003637730 / YP_003637754
Clavibacter michiganensis subsp. michiganensisT NCPPB 382 / NC_009480 / YP_001223531 / YP_001223359 / YP_001223362 / YP_001223361 / YP_001223350 / YP_001223348 / YP_001221601
Conexibacter woeseiT DSM 14684T / NC_013739 / YP_003393128 / YP_003393147 / YP_003393144 / YP_003393145 / YP_003393156 / YP_003393159 / YP_003393130
Corynebacterium diphtheriaeT NCTC 13129 / NC_002935 / NP_938814 / NP_938855 / NP_938852 / NP_938853 / NP_938867 / NP_938901 / CAE48942
Cryptobacterium curtumT DSM 15641T / NC_013170 / YP_003151342 / YP_003151370 / YP_003151375 / YP_003151374 / YP_003151361 / YP_003151358 / YP_003150653
Dermacoccus sp. Ellin185 / NZ_AEIQ00000000 / ZP_07706132 / ZP_07706020 / ZP_07706127 / ZP_07706090 / ZP_07706149 / ZP_07706021 / ZP_07706039
Dietzia cinnamea P4 / NZ_AEKG00000000 / ZP_08024394 / ZP_08022841 / ZP_08022844 / ZP_08022843 / ZP_08022831 / ZP_08022829 / ZP_08024402
Escherichia coliT ATCC 8739 / NC_010468 / YP_001726967 / YP_001723401 / YP_001723398 / YP_001723399 / YP_001723410 / YP_001723413 / YP_001726965
Frankia sp. CcI3 / NC_007777 / YP_479683 / YP_479698 / YP_479695 / YP_479696 / YP_479707 / YP_479710 / YP_479685
Gardnerella vaginalisT ATCC 14019 / NC_014644 / YP_003985465 / YP_003986385 / YP_003986388 / YP_003986387 / YP_003986376 / YP_003986373 / YP_003985462
Geodermatophilus obscurusT DSM 43160T / NC_013757 / YP_003411444 / YP_003411425 / YP_003411428 / YP_003411427 / YP_003411416 / YP_003411413 / YP_003411441
Gordonia bronchialisT DSM 43247T / NC_013441 / YP_003272314 / YP_003274829 / YP_003274832 / YP_003274831 / YP_003274788 / YP_003274768 / YP_003272326
Intrasporangium calvumT DSM 43043T / NC_014830 / YP_004100014 / YP_004099981 / YP_004099984 / YP_004099983 / YP_004099972 / YP_004099969 / YP_004100011
Janibacter sp. HTCC2649 / NZ_AAMN00000000 / EAQ00184 / EAQ00156 / EAQ00159 / EAQ00158 / EAQ00147 / EAQ00144 / EAQ00170
Jonesia denitrificansT DSM 20603T / NC_013174 / YP_003160544 / YP_003160557 / YP_003160554 / YP_003160555 / YP_003160566 / YP_003160569 / YP_003160546
Kineococcus radiotolerans SRS30216T / NC_009664 / YP_001360430 / YP_001360444 / YP_001360441 / YP_001360442 / YP_001360453 / YP_001360456 / YP_001360432
Kocuria rhizophila NBRC 103217 / NC_010617 / YP_001854439 / YP_001854472 / YP_001854469 / YP_001854470 / YP_001854481 / YP_001854483 / YP_001854449
Kribbella flavidaT DSM 17836 / NC_013729 / YP_003383970 / YP_003383930 / YP_003383933 / YP_003383932 / YP_003383921 / YP_003383918 / YP_003383959
Kytococcus sedentariusT DSM 20547T / NC_013169 / YP_003149860 / YP_003149843 / YP_003149846 / YP_003149845 / YP_003149834 / YP_003149831 / YP_003149856
Leifsonia xyli subsp. xyli CTCB07 / NC_006087 / YP_061425 / YP_062851 / YP_062854 / YP_062853 / YP_062842 / YP_062840 / YP_061440
Microbacterium testaceum StLB037 / NC_015125 / YP_004225312 / YP_004223765 / YP_004223768 / YP_004223767 / YP_004223756 / YP_004223754 / YP_004225327
Micrococcus luteusT NCTC 2665T / NC_012803 / YP_002957769 / YP_002957754 / YP_002957757 / YP_002957756 / YP_002957745 / YP_002957743 / YP_002957767
Micromonospora aurantiaca ATCC 27029T / NC_014391 / YP_003838623 / YP_003838606 / YP_003838609 / YP_003838608 / YP_003838597 / YP_003838594 / YP_003838619
Mobiluncus mulieris ATCC 35239 / NZ_GL405260 / ZP_07451644 / ZP_07453195 / ZP_07453198 / ZP_07453197 / ZP_07453167 / ZP_07453164 / ZP_07451653
Mycobacterium tuberculosisT H37RvT / NC_000962 / NP_215155 / NP_215218 / NP_215215 / NP_215216 / NP_215230 / NP_215233 / CAB07109
Nakamurella multipartitaT DSM 44233T / NC_013235 / YP_003200413 / YP_003200522 / YP_003200519 / YP_003200520 / YP_003200531 / YP_003200534 / YP_003200417
Nocardia farcinica IFM 10152 / NC_006361 / YP_121330 / YP_116945 / YP_116942 / YP_116943 / YP_116985 / YP_116998 / YP_121327
Nocardioides sp. JS614 / NC_008699 / YP_921909 / YP_925087 / YP_925090 / YP_925089 / YP_925078 / YP_925075 / YP_921911
Nocardiopsis dassonvillei subsp. dassonvilleiT DSM 43111T / NC_014210/1 / YP_003682998 / YP_003683013 / YP_003683010 / YP_003683011 / YP_003683022 / YP_003683025 / YP_003683002
Olsenella uliT DSM 7084T / NC_014363 / YP_003801602 / YP_003801586 / YP_003801589 / YP_003801588 / YP_003801576 / YP_003801573 / YP_003801599
Parascardovia denticolens F0305 / NZ_GG770319 / ZP_06752586 / ZP_06751668 / ZP_06751665 / ZP_06751666 / ZP_06751677 / ZP_06751680 / ZP_06751748
Propionibacterium acnes KPA171202 / NC_006085 / YP_056568 / YP_056542 / YP_056545 / YP_056544 / YP_056533 / YP_056530 / YP_056566
Renibacterium salmoninarumT ATCC 33209T / NC_010168 / YP_001624143 / YP_001625308 / YP_001625311 / YP_001625310 / YP_001625297 / YP_001625295 / YP_001624149
Rhodococcus erythropolis NBRC 100887 / NC_012490 / YP_002765165 / YP_002765302 / YP_002765299 / YP_002765300 / YP_002765311 / YP_002765315 / YP_002765168
Rothia dentocariosaT ATCC 17931T / NC_014643 / YP_003983237 / YP_003983192 / YP_003983195 / YP_003983194 / YP_003983181 / YP_003983179 / YP_003983233
Rubrobacter xylanophilus DSM 9941T / NC_008148 / YP_644921 / YP_644908 / YP_644911 / YP_644910 / YP_644899 / YP_644896 / YP_644919
Saccharomonospora viridisT DSM 43017T / NC_013159 / YP_003132269 / YP_003132305 / YP_003132302 / YP_003132303 / YP_003132314 / YP_003132317 / YP_003132272
Saccharopolyspora erythraea NRRL 2338T / NC_009142 / YP_001108959 / YP_001108922 / YP_001108925 / YP_001108924 / YP_001108913 / YP_001108910 / YP_001108956
Salinispora arenicolaT CNS-205 / NC_009953 / YP_001539100 / YP_001539084 / YP_001539087 / YP_001539086 / YP_001539075 / YP_001539072 / YP_001539098
Sanguibacter keddieiiT DSM 10542T / NC_013521 / YP_003315722 / YP_003315707 / YP_003315710 / YP_003315709 / YP_003315698 / YP_003315695 / YP_003315720
Segniliparus rotundusT DSM 44985 / NC_014168 / YP_003659989 / YP_003657472 / YP_003657469 / YP_003657470 / YP_003660160 / YP_003660157 / YP_003659985
Slackia heliotrinireducens DSM 20476T / NC_013165 / YP_003143267 / YP_003144702 / YP_003143992 / YP_003143991 / YP_003144693 / YP_003144690 / YP_003143246
Stackebrandtia nassauensisTDSM 44728T / NC_013947 / YP_003514683 / YP_003509991 / YP_003509988 / YP_003509989 / YP_003510000 / YP_003510003 / YP_003514680
Streptomyces avermitilis MA-4680T / NC_003155 / NP_826088 / NP_826106 / NP_826103 / NP_826104 / NP_826115 / NP_826118 / NP_826090
Streptosporangium roseumT DSM 43021T / NC_013595 / YP_003336813 / YP_003336831 / YP_003336828 / YP_003336829 / YP_003336840 / YP_003336843 / YP_003336816
Thermobifida fusca YX / NC_007333 / YP_290713 / YP_290699 / YP_290702 / YP_290701 / YP_290690 / YP_290687 / YP_290711
Thermobispora bisporaT DSM 43833T / NC_014165 / YP_003651159 / YP_003651185 / YP_003651182 / YP_003651183 / YP_003651194 / YP_003651197 / YP_003651162
Thermomonospora curvataT DSM 43183T / NC_013510 / YP_003301919 / YP_003301883 / YP_003301886 / YP_003301885 / YP_003301874 / YP_003301871 / YP_003301915
Tsukamurella paurometabolaTDSM 20162T / NC_014158 / YP_003645719 / YP_003648355 / YP_003648358 / YP_003648357 / YP_003648342 / YP_003648325 / YP_003645727
Xylanimonas cellulosilyticaT DSM 15894 / NC_013530 / YP_003325210 / YP_003325227 / YP_003325224 / YP_003325225 / YP_003325236 / YP_003325239 / YP_003325216
Organism / Rpl9 / Rpl10 / Rpl11 / Rpl13 / Rpl14 / Rpl15 / Rpl16 / Rpl17
Acidimicrobium ferrooxidansT DSM 10331T / YP_003108690 / YP_003109030 / YP_003109028 / YP_003109070 / YP_003109049 / YP_003109058 / YP_003109046 / YP_003109068
Acidothermus cellulolyticusT 11BT / YP_873888 / YP_872057 / YP_872055 / YP_872101 / YP_872076 / YP_872085 / YP_872073 / YP_872095
Actinomyces odontolyticus ATCC 17982 / EDN80319 / EDN80738 / EDN80731 / EDN79887 / EDN79908 / EDN79899 / EDN79911 / EDN79890
Actinosynnema mirumT DSM 43827T / YP_003104680 / YP_003104280 / YP_003104283 / YP_003104210 / YP_003104248 / YP_003104239 / YP_003104251 / YP_003104226
Aeromicrobium marinum DSM 15272T / ZP_07715931 / ZP_07718633 / ZP_07718635 / ZP_07718564 / ZP_07718595 / ZP_07718586 / ZP_07718598 / ZP_07718573
Amycolatopsis mediterranei U32 / YP_003771389 / YP_003762821 / YP_003770855 / YP_003762948 / YP_003762909 / YP_003762918 / YP_003762906 / YP_003762931
Arcanobacterium haemolyticumT DSM 20595T / YP_003698096 / YP_003697719 / YP_003697722 / YP_003697664 / YP_003697699 / YP_003697690 / YP_003697702 / YP_003697668
Arthrobacter arilaitensis Re117T / YP_003918557 / YP_003917554 / YP_003917556 / YP_003917506 / YP_003917528 / YP_003917520 / YP_003917535 / YP_003917511
Atopobium parvulum DSM 20469T / YP_003179053 / YP_003180191 / YP_003180193 / YP_003180266 / YP_003180170 / YP_003180161 / YP_003180173 / YP_003180151
Bacillus subtilis subsp. subtilisT 168 / NP_391930 / NP_387985 / NP_387983 / NP_388030 / NP_388007 / NP_388016 / NP_388004 / NP_388025
Beutenbergia cavernaeTDSM 12333T / YP_002884178 / YP_002883163 / YP_002883167 / YP_002883112 / YP_002883139 / YP_002883130 / YP_002883142 / YP_002883118
Bifidobacterium adolescentis ATCC 15703T / YP_910343 / YP_909147 / YP_909110 / YP_909172 / YP_909194 / YP_909203 / YP_909191 / YP_909211
Brachybacterium faeciumTDSM 4810T / YP_003156523 / YP_003155778 / YP_003155780 / YP_003155708 / YP_003155752 / YP_003155743 / YP_003155756 / YP_003155734
Brevibacterium mcbrellneri ATCC 49030T / ZP_06805082 / ZP_06806654 / ZP_06806650 / ZP_06805361 / ZP_06804563 / ZP_06804555 / ZP_06804566 / ZP_06806600
Catenulispora acidiphilaTDSM 44928T / YP_003111128 / YP_003111688 / YP_003111684 / YP_003111743 / YP_003111714 / YP_003111723 / YP_003111711 / YP_003111738
Cellulomonas flavigenaTDSM 20109T / YP_003638764 / YP_003637755 / YP_003637762 / YP_003637700 / YP_003637735 / YP_003637726 / YP_003637738 / YP_003637711
Clavibacter michiganensis subsp. michiganensisT NCPPB 382 / YP_001223705 / YP_001221600 / YP_001223532 / YP_001223325 / YP_001223352 / YP_001223344 / YP_001223355 / YP_001223328
Conexibacter woeseiT DSM 14684T / YP_003397688 / YP_003393129 / YP_003393127 / YP_003393682 / YP_003393154 / YP_003393163 / YP_003393151 / YP_003393171
Corynebacterium diphtheriaeTNCTC 13129 / NP_940591 / NP_938817 / NP_938813 / NP_938937 / NP_938865 / NP_938905 / NP_938859 / NP_938926
Cryptobacterium curtumT DSM 15641T / YP_003151524 / YP_003150652 / YP_003151343 / YP_003150584 / YP_003151363 / YP_003151354 / YP_003151366 / YP_003150560
Dermacoccus sp. Ellin185 / ZP_07705158 / ZP_07706172 / ZP_07706198 / ZP_07706154 / ZP_07706135 / ZP_07706215 / ZP_07706194 / ZP_07706040
Dietzia cinnamea P4 / ZP_08024520 / ZP_08024401 / ZP_08024393 / ZP_08022511 / ZP_08022833 / ZP_08022825 / ZP_08022837 / ZP_08022815
EscherichiacoliT ATCC 8739 / YP_001726741 / YP_001726966 / YP_001726968 / YP_001723479 / YP_001723408 / YP_001723417 / YP_001723405 / YP_001723424
Frankia sp. CcI3 / YP_483594 / YP_479684 / YP_483193 / YP_479727 / YP_479705 / YP_479714 / YP_479702 / YP_479724
GardnerellavaginalisT ATCC 14019 / YP_003986261 / YP_003985461 / YP_003985464 / YP_003986392 / YP_003986378 / YP_003986369 / YP_003986381 / YP_003986362
GeodermatophilusobscurusT DSM 43160T / YP_003411963 / YP_003411442 / YP_003411445 / YP_003411389 / YP_003411418 / YP_003411409 / YP_003411421 / YP_003411399
Gordonia bronchialisTDSM 43247T / YP_003275749 / YP_003272325 / YP_003272313 / YP_003272848 / YP_003274790 / YP_003274764 / YP_003274825 / YP_003274747
Intrasporangium calvumT DSM 43043T / YP_004100814 / YP_004100012 / YP_004100015 / YP_004099936 / YP_004099974 / YP_004099965 / YP_004099977 / YP_004099951
Janibacter sp. HTCC2649 / ZP_00996058 / EAQ00171 / EAQ00185 / EAQ00106 / EAQ00149 / EAQ00140 / EAQ00152 / EAQ00116
Jonesia denitrificansT DSM 20603T / YP_003162457 / YP_003160545 / YP_003160543 / YP_003160584 / YP_003160564 / YP_003160573 / YP_003160561 / YP_003160581
Kineococcus radiotolerans SRS30216T / YP_001364063 / YP_001360431 / YP_001360429 / YP_001360473 / YP_001360451 / YP_001360460 / YP_001360448 / YP_001360469
Kocuria rhizophilaNBRC 103217 / YP_001856189 / YP_001854448 / YP_001854438 / YP_001854499 / YP_001854479 / YP_001854487 / YP_001854476 / YP_001854497
Kribbella flavidaT DSM 17836 / YP_003384785 / YP_003383960 / YP_003383971 / YP_003383889 / YP_003383923 / YP_003383914 / YP_003383926 / YP_003383901
Kytococcus sedentariusTDSM 20547T / YP_003150371 / YP_003149857 / YP_003149861 / YP_003149812 / YP_003149836 / YP_003149827 / YP_003149839 / YP_003149817
Leifsonia xyli subsp. xyli CTCB07 / YP_063227 / YP_061439 / YP_061424 / YP_062823 / YP_062844 / YP_062836 / YP_062847 / YP_062827
Microbacterium testaceum StLB037 / YP_004224402 / YP_004225326 / YP_004225311 / YP_004223677 / YP_004223758 / YP_004223750 / YP_004223761 / YP_004223741
Micrococcus luteusT NCTC 2665T / YP_002958340 / YP_002957768 / YP_002957770 / YP_002957728 / YP_002957747 / YP_002957739 / YP_002957750 / YP_002957730
Micromonospora aurantiaca ATCC 27029T / YP_003839333 / YP_003838620 / YP_003838624 / YP_003838541 / YP_003838599 / YP_003838590 / YP_003838602 / YP_003838578
Mobiluncus mulieris ATCC 35239 / ZP_07451217 / ZP_07451652 / ZP_07451643 / ZP_07453115 / ZP_07453169 / ZP_07453160 / ZP_07453191 / ZP_07453148
Mycobacterium tuberculosisT H37RvT / NP_214570 / NP_215165 / NP_215154 / NP_217960 / NP_215228 / NP_215237 / NP_215222 / NP_217973
Nakamurella multipartitaTDSM 44233T / YP_003204619 / YP_003200416 / YP_003200412 / YP_003200572 / YP_003200529 / YP_003200538 / YP_003200526 / YP_003200569
Nocardia farcinica IFM 10152 / YP_121791 / YP_121328 / YP_121331 / YP_117075 / YP_116983 / YP_117002 / YP_116949 / YP_117047
Nocardioides sp. JS614 / YP_925843 / YP_921910 / YP_921908 / YP_922099 / YP_925080 / YP_925071 / YP_925083 / YP_925059
Nocardiopsis dassonvillei subsp. dassonvilleiT DSM 43111T / YP_003682730 / YP_003683001 / YP_003682997 / YP_003683044 / YP_003683020 / YP_003683029 / YP_003683017 / YP_003683039
Olsenella uliT DSM 7084T / YP_003800040 / YP_003801600 / YP_003801603 / YP_003800172 / YP_003801579 / YP_003801569 / YP_003801582 / YP_003801559
Parascardovia denticolens F0305 / ZP_06752534 / ZP_06751747 / ZP_06752585 / ZP_06751659 / ZP_06751675 / ZP_06751684 / ZP_06751672 / ZP_06751693
Propionibacterium acnes KPA171202 / YP_056889 / YP_056567 / YP_056569 / YP_056488 / YP_056535 / YP_056526 / YP_056538 / YP_056509
Renibacterium salmoninarumT ATCC 33209T / YP_001626647 / YP_001624148 / YP_001624142 / YP_001624887 / YP_001625299 / YP_001625291 / YP_001625304 / YP_001625262
Rhodococcus erythropolis NBRC 100887 / YP_002769275 / YP_002765167 / YP_002765164 / YP_002765351 / YP_002765309 / YP_002765319 / YP_002765306 / YP_002765329
Rothia dentocariosaT ATCC 17931T / YP_003983815 / YP_003983234 / YP_003983238 / YP_003983163 / YP_003983183 / YP_003983175 / YP_003983188 / YP_003983165
Rubrobacter xylanophilus DSM 9941T / YP_643630 / YP_644920 / YP_644922 / YP_644877 / YP_644901 / YP_644892 / YP_644904 / YP_644883
Saccharomonospora viridisTDSM 43017T / YP_003135711 / YP_003132271 / YP_003132268 / YP_003132347 / YP_003132312 / YP_003132321 / YP_003132309 / YP_003132331
Saccharopolyspora erythraea NRRL 2338T / YP_001109429 / YP_001108957 / YP_001108960 / YP_001108871 / YP_001108915 / YP_001108906 / YP_001108918 / YP_001108891
SalinisporaarenicolaT CNS-205 / YP_001539799 / YP_001539099 / YP_001539101 / YP_001539026 / YP_001539077 / YP_001539068 / YP_001539080 / YP_001539057
Sanguibacter keddieiiT DSM 10542T / YP_003316495 / YP_003315721 / YP_003315723 / YP_003315672 / YP_003315700 / YP_003315691 / YP_003315703 / YP_003315681
Segniliparus rotundusT DSM 44985 / YP_003657601 / YP_003659986 / YP_003659990 / YP_003657661 / YP_003660162 / YP_003660153 / YP_003657476 / YP_003659773
Slackia heliotrinireducens DSM 20476T / YP_003145131 / YP_003143245 / YP_003143266 / YP_003144558 / YP_003144695 / YP_003144686 / YP_003144698 / YP_003144333
Stackebrandtia nassauensisTDSM 44728T / YP_003508944 / YP_003514681 / YP_003514684 / YP_003509726 / YP_003509998 / YP_003510007 / YP_003509995 / YP_003510021
Streptomyces avermitilis MA-4680T / NP_825463 / NP_826089 / NP_826087 / NP_826134 / NP_826113 / NP_826122 / NP_826110 / NP_826131
Streptosporangium roseumT DSM 43021T / YP_003344715 / YP_003336815 / YP_003336812 / YP_003336867 / YP_003336838 / YP_003336847 / YP_003336835 / YP_003336861
Thermobifida fusca YX / YP_291148 / YP_290712 / YP_290714 / YP_290670 / YP_290692 / YP_290683 / YP_290695 / YP_290673
Thermobispora bisporaT DSM 43833T / YP_003654139 / YP_003651161 / YP_003651158 / YP_003651219 / YP_003651192 / YP_003651201 / YP_003651189 / YP_003651214
Thermomonospora curvataT DSM 43183T / YP_003302499 / YP_003301916 / YP_003301920 / YP_003301849 / YP_003301876 / YP_003301867 / YP_003301879 / YP_003301854
Tsukamurella paurometabolaTDSM 20162T / YP_003649074 / YP_003645726 / YP_003645718 / YP_003645842 / YP_003648344 / YP_003648321 / YP_003648351 / YP_003648304
Xylanimonas cellulosilyticaT DSM 15894 / YP_003327909 / YP_003325215 / YP_003325209 / YP_003325258 / YP_003325234 / YP_003325243 / YP_003325231 / YP_003325252
Organism / Rpl18 / Rpl19 / Rpl20 / Rpl21 / Rpl22 / Rpl23 / Rpl24 / Rpl27
Acidimicrobium ferrooxidansT DSM 10331T / YP_003109055 / YP_003110093 / YP_003110265 / YP_003109392 / YP_003109044 / YP_003109041 / YP_003109050 / YP_003109393
Acidothermus cellulolyticusT 11BT / YP_872082 / YP_873315 / YP_873025 / YP_872515 / YP_872071 / YP_872068 / YP_872077 / YP_872516
Actinomyces odontolyticus ATCC 17982 / EDN79902 / EDN81222 / EDN81077 / EDN81052 / EDN79913 / EDN79916 / EDN79907 / EDN81051
Actinosynnema mirumT DSM 43827T / YP_003104242 / YP_003103576 / YP_003103135 / YP_003098985 / YP_003104253 / YP_003104256 / YP_003104247 / YP_003098986
Aeromicrobium marinum DSM 15272T / ZP_07718589 / ZP_07717913 / ZP_07716189 / ZP_07716844 / ZP_07718600 / ZP_07718603 / ZP_07718594 / ZP_07716843
Amycolatopsis mediterranei U32 / YP_003762915 / YP_003764173 / YP_003768196 / YP_003768834 / YP_003762904 / YP_003762901 / YP_003762910 / YP_003768833
Arcanobacterium haemolyticumT DSM 20595T / YP_003697693 / YP_003696930 / YP_003697306 / YP_003697404 / YP_003697704 / YP_003697707 / YP_003697698 / YP_003697403
Arthrobacter arilaitensis Re117T / YP_003917523 / YP_003916704 / YP_003916308 / YP_003917006 / YP_003917537 / YP_003917540 / YP_003917527 / YP_003917005
Atopobium parvulum DSM 20469T / YP_003180164 / YP_003179718 / YP_003179546 / YP_003179698 / YP_003180175 / YP_003180178 / YP_003180169 / YP_003179699
Bacillus subtilis subsp. subtilisT 168 / NP_388013 / NP_389486 / NP_390763 / NP_390674 / NP_388002 / NP_387999 / NP_388008 / NP_390672
Beutenbergia cavernaeTDSM 12333T / YP_002883133 / YP_002882545 / YP_002882395 / YP_002881640 / YP_002883144 / YP_002883147 / YP_002883138 / YP_002881641
Bifidobacterium adolescentis ATCC 15703T / YP_909200 / YP_909095 / YP_909937 / YP_909103 / YP_909189 / YP_909186 / YP_909195 / YP_909104
Brachybacterium faeciumTDSM 4810T / YP_003155746 / YP_003154440 / YP_003155580 / YP_003155236 / YP_003155758 / YP_003155761 / YP_003155751 / YP_003155235
Brevibacterium mcbrellneri ATCC 49030T / ZP_06804558 / ZP_06806238 / ZP_06805637 / ZP_06805209 / ZP_06804568 / ZP_06804571 / ZP_06804562 / ZP_06805208
Catenulispora acidiphilaTDSM 44928T / YP_003111720 / YP_003112278 / YP_003116181 / YP_003117942 / YP_003111709 / YP_003111706 / YP_003111715 / YP_003117941
Cellulomonas flavigenaTDSM 20109T / YP_003637729 / YP_003636571 / YP_003636723 / YP_003637373 / YP_003637740 / YP_003637743 / YP_003637734 / YP_003637372
Clavibacter michiganensis subsp. michiganensisT NCPPB 382 / YP_001223347 / YP_001222114 / YP_001222751 / YP_001222230 / YP_001223357 / YP_001223360 / YP_001223351 / YP_001222231
Conexibacter woeseiT DSM 14684T / YP_003393160 / YP_003395470 / YP_003395411 / YP_003394458 / YP_003393149 / YP_003393146 / YP_003393155 / YP_003394459
Corynebacterium diphtheriaeTNCTC 13129 / NP_938902 / NP_939871 / NP_939519 / NP_940119 / NP_938857 / NP_938854 / NP_938866 / NP_940118
Cryptobacterium curtumT DSM 15641T / YP_003151357 / YP_003151092 / YP_003150974 / YP_003150995 / YP_003151368 / YP_003151373 / YP_003151362 / YP_003150996
Dermacoccus sp. Ellin185 / ZP_07706112 / ZP_07705251 / ZP_07704862 / ZP_07704893 / ZP_07706218 / ZP_07706126 / ZP_07706209 / ZP_07704826
Dietzia cinnamea P4 / ZP_08022828 / ZP_08024865 / ZP_08023961 / ZP_08022308 / ZP_08022839 / ZP_08022842 / ZP_08022832 / ZP_08022307
Escherichia coliT ATCC 8739 / YP_001723414 / YP_001724071 / YP_001724889 / YP_001723518 / YP_001723403 / YP_001723400 / YP_001723409 / YP_001723519
Frankia sp. CcI3 / YP_479711 / YP_482671 / YP_482266 / YP_480327 / YP_479700 / YP_479697 / YP_479706 / YP_480328
Gardnerella vaginalisT ATCC 14019 / YP_003986372 / YP_003986324 / YP_003986269 / YP_003985426 / YP_003986383 / YP_003986386 / YP_003986377 / YP_003985427
Geodermatophilus obscurusT DSM 43160T / YP_003411412 / YP_003410940 / YP_003410018 / YP_003408678 / YP_003411423 / YP_003411426 / YP_003411417 / YP_003408679
Gordonia bronchialisTDSM 43247T / YP_003274767 / YP_003273235 / YP_003273953 / YP_003273204 / YP_003274827 / YP_003274830 / YP_003274789 / YP_003273205
Intrasporangium calvumT DSM 43043T / YP_004099968 / YP_004099524 / YP_004098789 / YP_004098630 / YP_004099979 / YP_004099982 / YP_004099973 / YP_004098631
Janibacter sp. HTCC2649 / EAQ00143 / ZP_00997161 / EAP99385 / ZP_00997361 / EAQ00154 / EAQ00157 / EAQ00148 / ZP_00997362
Jonesia denitrificansT DSM 20603T / YP_003160570 / YP_003160948 / YP_003161064 / YP_003161603 / YP_003160559 / YP_003160556 / YP_003160565 / YP_003161602
Kineococcus radiotolerans SRS30216T / YP_001360457 / YP_001361154 / YP_001362895 / YP_001363184 / YP_001360446 / YP_001360443 / YP_001360452 / YP_001363183
Kocuria rhizophila NBRC 103217 / YP_001854484 / YP_001854919 / YP_001855418 / YP_001854983 / YP_001854474 / YP_001854471 / YP_001854480 / YP_001854984
Kribbella flavidaT DSM 17836 / YP_003383917 / YP_003382574 / YP_003383263 / YP_003380197 / YP_003383928 / YP_003383931 / YP_003383922 / YP_003380198
Kytococcus sedentariusTDSM 20547T / YP_003149830 / YP_003148914 / YP_003149027 / YP_003148959 / YP_003149841 / YP_003149844 / YP_003149835 / YP_003148960
Leifsonia xyli subsp. xyliCTCB07 / YP_062839 / YP_062396 / YP_062720 / YP_061817 / YP_062849 / YP_062852 / YP_062843 / YP_061818
Microbacterium testaceum StLB037 / YP_004223753 / YP_004226108 / YP_004223127 / YP_004226197 / YP_004223763 / YP_004223766 / YP_004223757 / YP_004226198
Micrococcus luteusT NCTC 2665T / YP_002957742 / YP_002956994 / YP_002957506 / YP_002957080 / YP_002957752 / YP_002957755 / YP_002957746 / YP_002957081
Micromonospora aurantiaca ATCC 27029T / YP_003838593 / YP_003834528 / YP_003835487 / YP_003837973 / YP_003838604 / YP_003838607 / YP_003838598 / YP_003837972
Mobiluncus mulieris ATCC 35239 / ZP_07453163 / ZP_07452945 / ZP_07452275 / ZP_07451897 / ZP_07453193 / ZP_07453196 / ZP_07453168 / ZP_07451898
Mycobacterium tuberculosisT H37RvT / NP_215234 / NP_217420 / NP_216159 / NP_216958 / NP_215220 / NP_215217 / NP_215229 / NP_216957
Nakamurella multipartitaTDSM 44233T / YP_003200535 / YP_003202454 / YP_003203420 / YP_003200891 / YP_003200524 / YP_003200521 / YP_003200530 / YP_003200892
Nocardia farcinica IFM 10152 / YP_116999 / YP_120360 / YP_118126 / YP_117562 / YP_116947 / YP_116944 / YP_116984 / YP_117563
Nocardioides sp. JS614 / YP_925074 / YP_924444 / YP_923652 / YP_924638 / YP_925085 / YP_925088 / YP_925079 / YP_924637
Nocardiopsis dassonvillei subsp. dassonvilleiT DSM 43111T / YP_003683026 / YP_003678184 / YP_003680984 / YP_003681291 / YP_003683015 / YP_003683012 / YP_003683021 / YP_003681290
Olsenella uliT DSM 7084T / YP_003801572 / YP_003800880 / YP_003800735 / YP_003800856 / YP_003801584 / YP_003801587 / YP_003801578 / YP_003800857
Parascardovia denticolens F0305 / ZP_06751681 / ZP_06751963 / ZP_06752310 / ZP_06752574 / ZP_06751670 / ZP_06751667 / ZP_06751676 / ZP_06752575
Propionibacterium acnes KPA171202 / YP_056529 / YP_056142 / YP_056120 / YP_055541 / YP_056540 / YP_056543 / YP_056534 / YP_055542
Renibacterium salmoninarumT ATCC 33209T / YP_001625294 / YP_001624237 / YP_001623908 / YP_001626379 / YP_001625306 / YP_001625309 / YP_001625298 / YP_001626378
Rhodococcus erythropolis NBRC 100887 / YP_002765316 / YP_002765904 / YP_002766740 / YP_002767241 / YP_002765304 / YP_002765301 / YP_002765310 / YP_002767240
Rothia dentocariosaT ATCC 17931T / YP_003983178 / YP_003984690 / YP_003984490 / YP_003984961 / YP_003983190 / YP_003983193 / YP_003983182 / YP_003984960
Rubrobacter xylanophilus DSM 9941T / YP_644895 / YP_644167 / YP_644079 / YP_644299 / YP_644906 / YP_644909 / YP_644900 / YP_644298
Saccharomonospora viridisTDSM 43017T / YP_003132318 / YP_003132863 / YP_003134385 / YP_003133126 / YP_003132307 / YP_003132304 / YP_003132313 / YP_003133127
Saccharopolyspora erythraea NRRL 2338T / YP_001108909 / YP_001108147 / YP_001107443 / YP_001103661 / YP_001108920 / YP_001108923 / YP_001108914 / YP_001103662
SalinisporaarenicolaT CNS-205 / YP_001539071 / YP_001536097 / YP_001536753 / YP_001538643 / YP_001539082 / YP_001539085 / YP_001539076 / YP_001538642
Sanguibacter keddieiiT DSM 10542T / YP_003315694 / YP_003315119 / YP_003314990 / YP_003313918 / YP_003315705 / YP_003315708 / YP_003315699 / YP_003313919
Segniliparus rotundusT DSM 44985 / YP_003660156 / YP_003659254 / YP_003659088 / YP_003659045 / YP_003657474 / YP_003657471 / YP_003660161 / YP_003659044
Slackia heliotrinireducens DSM 20476T / YP_003144689 / YP_003143421 / YP_003143887 / YP_003143676 / YP_003144700 / YP_003143990 / YP_003144694 / YP_003143677
Stackebrandtia nassauensisTDSM 44728T / YP_003510004 / YP_003510970 / YP_003511818 / YP_003514204 / YP_003509993 / YP_003509990 / YP_003509999 / YP_003514203
Streptomyces avermitilis MA-4680T / NP_826119 / NP_823816 / NP_827915 / NP_826644 / NP_826108 / NP_826105 / NP_826114 / NP_826645
Streptosporangium roseumT DSM 43021T / YP_003336844 / YP_003337563 / YP_003341560 / YP_003342701 / YP_003336833 / YP_003336830 / YP_003336839 / YP_003342700
Thermobifida fusca YX / YP_290686 / YP_288727 / YP_290120 / YP_290238 / YP_290697 / YP_290700 / YP_290691 / YP_290237
Thermobispora bisporaT DSM 43833T / YP_003651198 / YP_003651599 / YP_003652645 / YP_003653056 / YP_003651187 / YP_003651184 / YP_003651193 / YP_003653055
Thermomonospora curvataT DSM 43183T / YP_003301870 / YP_003300995 / YP_003299745 / YP_003299161 / YP_003301881 / YP_003301884 / YP_003301875 / YP_003299162
Tsukamurella paurometabolaTDSM 20162T / YP_003648324 / YP_003646590 / YP_003647361 / YP_003646439 / YP_003648353 / YP_003648356 / YP_003648343 / YP_003646440
Xylanimonas cellulosilyticaT DSM 15894 / YP_003325240 / YP_003325760 / YP_003325907 / YP_003326836 / YP_003325229 / YP_003325226 / YP_003325235 / YP_003326835
Organism / Rpl29 / Rpl30 / Rpl34 / Rpl35 / Rps1 / Rps2 / Rps3 / Rps4
Acidimicrobium ferrooxidansT DSM 10331T / YP_003109047 / YP_003109057 / YP_003110612 / YP_003110266 / YP_003109686 / YP_003109253 / YP_003109045 / YP_003109066
Acidothermus cellulolyticusT 11BT / YP_872074 / YP_872084 / YP_873919 / YP_873026 / YP_872847 / YP_873300 / YP_872072 / YP_872093
Actinomyces odontolyticus ATCC 17982 / EDN79910 / EDN79900 / EDN80292 / EDN81078 / EDN80905 / EDN81212 / EDN79912 / EDN80922
Actinosynnema mirumT DSM 43827T / YP_003104250 / YP_003104240 / YP_003104736 / YP_003103136 / YP_003103186 / YP_003103566 / YP_003104252 / YP_003104228
Aeromicrobium marinum DSM 15272T / ZP_07718597 / ZP_07718587 / ZP_07715972 / ZP_07716188 / ZP_07716486 / ZP_07717922 / ZP_07718599 / ZP_07718575
Amycolatopsis mediterranei U32 / YP_003762907 / YP_003762917 / YP_003771456 / YP_003768197 / YP_003768266 / YP_003764183 / YP_003762905 / YP_003762929
Arcanobacterium haemolyticumT DSM 20595T / YP_003697701 / YP_003697691 / YP_003698118 / YP_003697307 / YP_003697238 / YP_003696941 / YP_003697703 / YP_003697186
Arthrobacter arilaitensis Re117T / YP_003917534 / YP_003917521 / YP_003918596 / YP_003916307 / YP_003917122 / YP_003916152 / YP_003917536 / YP_003916918
Atopobium parvulum DSM 20469T / YP_003180172 / YP_003180162 / YP_003180384 / YP_003179545 / YP_003179982 / YP_003179725 / YP_003180174 / YP_003180153
Bacillus subtilis subsp. subtilisT 168 / NP_388005 / NP_388015 / NP_391986 / NP_390764 / NP_390169 / NP_389531 / NP_388003 / NP_390844
Beutenbergia cavernaeTDSM 12333T / YP_002883141 / YP_002883131 / YP_002884225 / YP_002882396 / YP_002882207 / YP_002882519 / YP_002883143 / YP_002882028
Bifidobacterium adolescentis ATCC 15703T / YP_909192 / YP_909202 / YP_910494 / YP_909938 / YP_909537 / YP_909644 / YP_909190 / YP_909560
Brachybacterium faeciumTDSM 4810T / YP_003155755 / YP_003155744 / YP_003156546 / YP_003155581 / YP_003154919 / YP_003154450 / YP_003155757 / YP_003155053
Brevibacterium mcbrellneri ATCC 49030T / ZP_06804565 / ZP_06804556 / ZP_06805060 / ZP_06805636 / ZP_06805520 / ZP_06806519 / ZP_06804567 / ZP_06806277
Catenulispora acidiphilaTDSM 44928T / YP_003111712 / YP_003111722 / YP_003119710 / YP_003116182 / YP_003116372 / YP_003112291 / YP_003111710 / YP_003111736
Cellulomonas flavigenaT DSM 20109T / YP_003637737 / YP_003637727 / YP_003638797 / YP_003636722 / YP_003637054 / YP_003636581 / YP_003637739 / YP_003636911
Clavibacter michiganensis subsp. michiganensisT NCPPB 382 / YP_001223354 / YP_001223345 / YP_001223723 / YP_001222752 / YP_001222495 / YP_001222124 / YP_001223356 / YP_001222547
Conexibacter woeseiT DSM 14684T / YP_003393152 / YP_003393162 / YP_003397725 / YP_003395412 / YP_003394666 / YP_003395310 / YP_003393150 / YP_003397542
Corynebacterium diphtheriaeT NCTC 13129 / NP_938860 / NP_938904 / NP_940681 / NP_939518 / NP_939505 / NP_939854 / NP_938858 / NP_938924
Cryptobacterium curtumT DSM 15641T / YP_003151365 / YP_003151355 / YP_003151775 / YP_003150973 / YP_003150933 / YP_003151594 / YP_003151367 / YP_003150558
Dermacoccus sp. Ellin185 / ZP_07706116 / ZP_07706118 / ZP_07705115 / ZP_07704836 / ZP_07704176 / ZP_07705259 / ZP_07706093 / ZP_07706019
Dietzia cinnamea P4 / ZP_08022836 / ZP_08022826 / ZP_08023493 / ZP_08023960 / ZP_08024854 / ZP_08022232 / ZP_08022838 / ZP_08022817
Escherichia coliT ATCC 8739 / YP_001723406 / YP_001723416 / YP_001727215 / YP_001724888 / YP_001725641 / YP_001726432 / YP_001723404 / YP_001723422
Frankia sp. CcI3 / YP_479703 / YP_479713 / YP_483623 / YP_482267 / YP_480168 / YP_482662 / YP_479701 / YP_479722
Gardnerella vaginalisT ATCC 14019 / YP_003986380 / YP_003986370 / YP_003985234 / YP_003986270 / YP_003986089 / YP_003985912 / YP_003986382 / YP_003986204
Geodermatophilus obscurusT DSM 43160T / YP_003411420 / YP_003411410 / YP_003411994 / YP_003410019 / YP_003410175 / YP_003410929 / YP_003411422 / YP_003407353
Gordonia bronchialisTDSM 43247T / YP_003274824 / YP_003274765 / YP_003275870 / YP_003273954 / YP_003273978 / YP_003273249 / YP_003274826 / YP_003274749
Intrasporangium calvumT DSM 43043T / YP_004099976 / YP_004099966 / YP_004100852 / YP_004098788 / YP_004098907 / YP_004099511 / YP_004099978 / YP_004099953
Janibacter sp. HTCC2649 / EAQ00151 / EAQ00141 / ZP_00996017 / EAP99386 / EAP99237 / ZP_00997179 / EAQ00153 / EAQ00118
Jonesia denitrificansT DSM 20603T / YP_003160562 / YP_003160572 / YP_003162493 / YP_003161063 / YP_003161188 / YP_003160963 / YP_003160560 / YP_003161313
Kineococcus radiotolerans SRS30216T / YP_001360449 / YP_001360459 / YP_001364236 / YP_001362896 / YP_001362676 / YP_001361167 / YP_001360447 / YP_001360862
Kocuria rhizophila NBRC 103217 / YP_001854477 / YP_001854486 / YP_001856210 / YP_001855419 / YP_001855042 / YP_001855478 / YP_001854475 / YP_001855202
Kribbella flavidaT DSM 17836 / YP_003383925 / YP_003383915 / YP_003384873 / YP_003383264 / YP_003380968 / YP_003382561 / YP_003383927 / YP_003383903
Kytococcus sedentariusTDSM 20547T / YP_003149838 / YP_003149828 / YP_003150419 / YP_003149026 / YP_003149095 / YP_003148924 / YP_003149840 / YP_003149819
Leifsonia xyli subsp. xyli CTCB07 / YP_062846 / YP_062837 / YP_063243 / YP_062721 / YP_062096 / YP_062193 / YP_062848 / YP_062046
Microbacterium testaceum StLB037 / YP_004223760 / YP_004223751 / YP_004224353 / YP_004223128 / YP_004222847 / YP_004226118 / YP_004223762 / YP_004226358
Micrococcus luteusT NCTC 2665T / YP_002957749 / YP_002957740 / YP_002958365 / YP_002957507 / YP_002957174 / YP_002956760 / YP_002957751 / YP_002957334
Micromonospora aurantiaca ATCC 27029T / YP_003838601 / YP_003838591 / YP_003839367 / YP_003835486 / YP_003837463 / YP_003834543 / YP_003838603 / YP_003837523
Mobiluncus mulieris ATCC 35239 / ZP_07453190 / ZP_07453161 / ZP_07451244 / ZP_07452274 / ZP_07452414 / ZP_07452933 / ZP_07453192 / ZP_07452465
Mycobacterium tuberculosisT H37RvT / NP_215223 / NP_215236 / NP_218441 / NP_216158 / NP_216146 / NP_217406 / NP_215221 / NP_217975
Nakamurella multipartitaTDSM 44233T / YP_003200527 / YP_003200537 / YP_003204667 / YP_003203421 / YP_003202360 / YP_003202435 / YP_003200525 / YP_003200567
Nocardia farcinica IFM 10152 / YP_116950 / YP_117001 / YP_121889 / YP_118125 / YP_118107 / YP_120344 / YP_116948 / YP_117045
Nocardioides sp. JS614 / YP_925082 / YP_925072 / YP_925882 / YP_923651 / YP_924178 / YP_924432 / YP_925084 / YP_925061
Nocardiopsis dassonvillei subsp. dassonvilleiT DSM 43111T / YP_003683018 / YP_003683028 / YP_003682757 / YP_003680985 / YP_003678911 / YP_003678192 / YP_003683016 / YP_003681067
Olsenella uliT DSM 7084T / YP_003801581 / YP_003801570 / YP_003801749 / YP_003800734 / YP_003801311 / YP_003800886 / YP_003801583 / YP_003801561
Parascardovia denticolens F0305 / ZP_06751673 / ZP_06751683 / ZP_06751474 / ZP_06752311 / ZP_06752049 / ZP_06752204 / ZP_06751671 / ZP_06752100
Propionibacterium acnes KPA171202 / YP_056537 / YP_056527 / YP_057020 / YP_056121 / YP_055492 / YP_056226 / YP_056539 / YP_056511
Renibacterium salmoninarumT ATCC 33209T / YP_001625303 / YP_001625292 / YP_001626681 / YP_001623907 / YP_001625444 / YP_001623690 / YP_001625305 / YP_001625129
Rhodococcus erythropolis NBRC 100887 / YP_002765307 / YP_002765318 / YP_002769481 / YP_002766741 / YP_002766759 / YP_002765989 / YP_002765305 / YP_002765327
Rothia dentocariosaT ATCC 17931T / YP_003983187 / YP_003983176 / YP_003983794 / YP_003984489 / YP_003984724 / YP_003984425 / YP_003983189 / YP_003984899
Rubrobacter xylanophilus DSM 9941T / YP_644903 / YP_644893 / YP_645932 / YP_644078 / YP_644783 / YP_644172 / YP_644905 / YP_644885
Saccharomonospora viridisTDSM 43017T / YP_003132310 / YP_003132320 / YP_003135748 / YP_003134386 / YP_003134411 / YP_003132873 / YP_003132308 / YP_003132329
Saccharopolyspora erythraea NRRL 2338T / YP_001108917 / YP_001108907 / YP_001109478 / YP_001107444 / YP_001107591 / YP_001108137 / YP_001108919 / YP_001108893
SalinisporaarenicolaT CNS-205 / YP_001539079 / YP_001539069 / YP_001539844 / YP_001536752 / YP_001538162 / YP_001536127 / YP_001539081 / YP_001539559
Sanguibacter keddieiiT DSM 10542T / YP_003315702 / YP_003315692 / YP_003316523 / YP_003314991 / YP_003314777 / YP_003315110 / YP_003315704 / YP_003314527
Segniliparus rotundusT DSM 44985 / YP_003657477 / YP_003660154 / YP_003660330 / YP_003659089 / YP_003657975 / YP_003659931 / YP_003657475 / YP_003659775
Slackia heliotrinireducens DSM 20476T / YP_003144697 / YP_003144687 / YP_003145189 / YP_003143888 / YP_003144361 / YP_003143218 / YP_003144699 / YP_003144335
Stackebrandtia nassauensisTDSM 44728T / YP_003509996 / YP_003510006 / YP_003515195 / YP_003511817 / YP_003512517 / YP_003510982 / YP_003509994 / YP_003513668
Streptomyces avermitilis MA-4680T / NP_826111 / NP_826121 / NP_825492 / NP_827914 / NP_827409 / NP_823803 / NP_826109 / NP_828023
Streptosporangium roseumT DSM 43021T / YP_003336836 / YP_003336846 / YP_003344750 / YP_003341561 / YP_003338666 / YP_003337594 / YP_003336834 / YP_003339083
Thermobifida fusca YX / YP_290694 / YP_290684 / YP_291173 / YP_290121 / YP_289252 / YP_288737 / YP_290696 / YP_289074
Thermobispora bisporaT DSM 43833T / YP_003651190 / YP_003651200 / YP_003654176 / YP_003652646 / YP_003652088 / YP_003651610 / YP_003651188 / YP_003651212
Thermomonospora curvataT DSM 43183T / YP_003301878 / YP_003301868 / YP_003302537 / YP_003299744 / YP_003300433 / YP_003300986 / YP_003301880 / YP_003301856
Tsukamurella paurometabolaTDSM 20162T / YP_003648350 / YP_003648322 / YP_003649150 / YP_003647362 / YP_003647379 / YP_003646626 / YP_003648352 / YP_003648306
Xylanimonas cellulosilyticaT DSM 15894 / YP_003325232 / YP_003325242 / YP_003327936 / YP_003325906 / YP_003326103 / YP_003325769 / YP_003325230 / YP_003326267
Organism / Rps5 / Rps6 / Rps7 / Rps8 / Rps9 / Rps10 / Rps11 / Rps12
Acidimicrobium ferrooxidansT DSM 10331T / YP_003109056 / YP_003108693 / YP_003109035 / YP_003109053 / YP_003109071 / YP_003109038 / YP_003109065 / YP_003109034
Acidothermus cellulolyticusT 11BT / YP_872083 / YP_873891 / YP_872062 / YP_872080 / YP_872102 / YP_872065 / YP_872092 / YP_872061
Actinomyces odontolyticus ATCC 17982 / EDN79901 / EDN80322 / EDN79922 / EDN79904 / EDN79886 / EDN79919 / EDN79892 / EDN79923
Actinosynnema mirumT DSM 43827T / YP_003104241 / YP_003104677 / YP_003104262 / YP_003104244 / YP_003104209 / YP_003104259 / YP_003104229 / YP_003104263
Aeromicrobium marinum DSM 15272T / ZP_07718588 / ZP_07715934 / ZP_07718610 / ZP_07718591 / ZP_07718563 / ZP_07718606 / ZP_07718576 / ZP_07718611
Amycolatopsis mediterranei U32 / YP_003762916 / YP_003771386 / YP_003762895 / YP_003762913 / YP_003762949 / YP_003762898 / YP_003762928 / YP_003762894
Arcanobacterium haemolyticumT DSM 20595T / YP_003697692 / YP_003698099 / YP_003697713 / YP_003697695 / YP_003697663 / YP_003697710 / YP_003697670 / YP_003697714
Arthrobacter arilaitensis Re117T / YP_003917522 / YP_003918560 / YP_003917547 / YP_003917525 / YP_003917505 / YP_003917543 / YP_003917513 / YP_003917548
Atopobium parvulum DSM 20469T / YP_003180163 / YP_003179049 / YP_003180184 / YP_003180166 / YP_003180265 / YP_003180182 / YP_003180154 / YP_003180185
Bacillus subtilis subsp. subtilisT 168 / NP_388014 / NP_391971 / NP_387992 / NP_388011 / NP_388031 / NP_387996 / NP_388023 / NP_387991
Beutenbergia cavernaeTDSM 12333T / YP_002883132 / YP_002884181 / YP_002883153 / YP_002883135 / YP_002883111 / YP_002883150 / YP_002883120 / YP_002883154
Bifidobacterium adolescentis ATCC 15703T / YP_909201 / YP_910346 / YP_909394 / YP_909198 / YP_909173 / YP_909183 / YP_909209 / YP_909393
Brachybacterium faeciumTDSM 4810T / YP_003155745 / YP_003156526 / YP_003155771 / YP_003155748 / YP_003155707 / YP_003155764 / YP_003155736 / YP_003155772
Brevibacterium mcbrellneri ATCC 49030T / ZP_06804557 / ZP_06805079 / ZP_06804578 / ZP_06804560 / ZP_06805362 / ZP_06804574 / ZP_06806602 / ZP_06804579
Catenulispora acidiphilaTDSM 44928T / YP_003111721 / YP_003111131 / YP_003111695 / YP_003111718 / YP_003111744 / YP_003111703 / YP_003111735 / YP_003111694
Cellulomonas flavigenaTDSM 20109T / YP_003637728 / YP_003638767 / YP_003637749 / YP_003637731 / YP_003637699 / YP_003637746 / YP_003637713 / YP_003637750
Clavibacter michiganensis subsp. michiganensisT NCPPB 382 / YP_001223346 / YP_001223708 / YP_001223367 / YP_001223349 / YP_001223324 / YP_001223363 / YP_001223330 / YP_001223368
Conexibacter woeseiT DSM 14684T / YP_003393161 / YP_003397685 / YP_003393140 / YP_003393158 / YP_003393683 / YP_003393143 / YP_003393169 / YP_003393139
Corynebacterium diphtheriaeTNCTC 13129 / NP_938903 / NP_940593 / NP_938847 / NP_938900 / NP_938938 / NP_938851 / NP_938923 / NP_938846
Cryptobacterium curtumT DSM 15641T / YP_003151356 / YP_003151527 / YP_003151378 / YP_003151359 / YP_003150585 / YP_003151376 / YP_003150557 / YP_003151379
Dermacoccus sp. Ellin185 / ZP_07706204 / ZP_07705200 / ZP_07706165 / ZP_07706163 / ZP_07706070 / ZP_07706142 / ZP_07706123 / ZP_07706060
Dietzia cinnamea P4 / ZP_08022827 / ZP_08024522 / ZP_08022849 / ZP_08022830 / ZP_08022510 / ZP_08022845 / ZP_08022818 / ZP_08022850
Escherichia coliT ATCC 8739 / YP_001723415 / YP_001726744 / YP_001723377 / YP_001723412 / YP_001723480 / YP_001723397 / YP_001723421 / YP_001723376
Frankia sp. CcI3 / YP_479712 / YP_483597 / YP_479691 / YP_479709 / YP_479728 / YP_479694 / YP_479721 / YP_479690
Gardnerella vaginalisT ATCC 14019 / YP_003986371 / YP_003986264 / YP_003985583 / YP_003986374 / YP_003986391 / YP_003986389 / YP_003986364 / YP_003985582
Geodermatophilus obscurusT DSM 43160T / YP_003411411 / YP_003411966 / YP_003411432 / YP_003411414 / YP_003411388 / YP_003411429 / YP_003411402 / YP_003411433
Gordonia bronchialisTDSM 43247T / YP_003274766 / YP_003275752 / YP_003274876 / YP_003274769 / YP_003272849 / YP_003274833 / YP_003274750 / YP_003274877
Intrasporangium calvumT DSM 43043T / YP_004099967 / YP_004100817 / YP_004099989 / YP_004099970 / YP_004099935 / YP_004099985 / YP_004099954 / YP_004099990
Janibacter sp. HTCC2649 / EAQ00142 / ZP_00996055 / EAQ00165 / EAQ00145 / EAQ00105 / EAQ00160 / Q00119 / EAQ00166
Jonesia denitrificansT DSM 20603T / YP_003160571 / YP_003162460 / YP_003160550 / YP_003160568 / YP_003160585 / YP_003160553 / YP_003160579 / YP_003160549
Kineococcus radiotolerans SRS30216T / YP_001360458 / YP_001364066 / YP_001360436 / YP_001360455 / YP_001360474 / YP_001360440 / YP_001360467 / YP_001360435
Kocuria rhizophila NBRC 103217 / YP_001854485 / YP_001856192 / YP_001854465 / YP_001854482 / YP_001854500 / YP_001854468 / YP_001854495 / YP_001854464
Kribbella flavidaT DSM 17836 / YP_003383916 / YP_003384788 / YP_003383937 / YP_003383919 / YP_003383888 / YP_003383934 / YP_003383904 / YP_003383938
Kytococcus sedentariusTDSM 20547T / YP_003149829 / YP_003150374 / YP_003149851 / YP_003149832 / YP_003149811 / YP_003149847 / YP_003149820 / YP_003149852
Leifsonia xyli subsp.xyliCTCB07 / YP_062838 / YP_063230 / YP_062861 / YP_062841 / YP_062822 / YP_062855 / YP_062829 / YP_062862
Microbacterium testaceum StLB037 / YP_004223752 / YP_004224399 / YP_004223803 / YP_004223755 / YP_004223676 / YP_004223769 / YP_004223743 / YP_004223804
Micrococcus luteusT NCTC 2665T / YP_002957741 / YP_002958343 / YP_002957763 / YP_002957744 / YP_002957727 / YP_002957758 / YP_002957732 / YP_002957764
Micromonospora aurantiaca ATCC 27029T / YP_003838592 / YP_003839336 / YP_003838613 / YP_003838595 / YP_003838540 / YP_003838610 / YP_003838581 / YP_003838614
Mobiluncus mulieris ATCC 35239 / ZP_07453162 / ZP_07451220 / ZP_07453205 / ZP_07453165 / ZP_07453114 / ZP_07453199 / ZP_07453150 / ZP_07453206
Mycobacterium tuberculosisT H37RvT / NP_215235 / NP_214567 / NP_215197 / NP_215232 / NP_217959 / NP_215214 / NP_217976 / NP_215196
Nakamurella multipartitaTDSM 44233T / YP_003200536 / YP_003204622 / YP_003200512 / YP_003200533 / YP_003200573 / YP_003200518 / YP_003200566 / YP_003200511
Nocardia farcinica IFM 10152 / YP_117000 / YP_121788 / YP_121293 / YP_116997 / YP_117076 / YP_116941 / YP_117044 / YP_121294
Nocardioides sp. JS614 / YP_925073 / YP_925846 / YP_925109 / YP_925076 / YP_922100 / YP_925091 / YP_925062 / YP_925110
Nocardiopsis dassonvillei subsp. dassonvilleiT DSM 43111T / YP_003683027 / YP_003682733 / YP_003683006 / YP_003683024 / YP_003683045 / YP_003683009 / YP_003683037 / YP_003683005
Olsenella uliT DSM 7084T / YP_003801571 / YP_003800036 / YP_003801594 / YP_003801574 / YP_003800173 / YP_003801592 / YP_003801562 / YP_003801595
Parascardovia denticolens F0305 / ZP_06751682 / ZP_06752531 / ZP_06751646 / ZP_06751679 / ZP_06751660 / ZP_06751664 / ZP_06751691 / ZP_06751645
Propionibacterium acnes KPA171202 / YP_056528 / YP_056892 / YP_056557 / YP_056531 / YP_056487 / YP_056546 / YP_056512 / YP_056559
Renibacterium salmoninarumT ATCC 33209T / YP_001625293 / YP_001626650 / YP_001625319 / YP_001625296 / YP_001624886 / YP_001625312 / YP_001625264 / YP_001625320
Rhodococcus erythropolis NBRC 100887 / YP_002765317 / YP_002769278 / YP_002765209 / YP_002765314 / YP_002765352 / YP_002765298 / YP_002765326 / YP_002765208
Rothia dentocariosaT ATCC 17931T / YP_003983177 / YP_003983812 / YP_003983202 / YP_003983180 / YP_003983162 / YP_003983196 / YP_003983167 / YP_003983203
Rubrobacter xylanophilus DSM 9941T / YP_644894 / YP_643628 / YP_644915 / YP_644897 / YP_644876 / YP_644912 / YP_644886 / YP_644916
Saccharomonospora viridisTDSM 43017T / YP_003132319 / YP_003135708 / YP_003132298 / YP_003132316 / YP_003132348 / YP_003132301 / YP_003132328 / YP_003132297
Saccharopolyspora erythraea NRRL 2338T / YP_001108908 / YP_001109432 / YP_001108929 / YP_001108911 / YP_001108870 / YP_001108926 / YP_001108894 / YP_001108930
SalinisporaarenicolaTCNS-205 / YP_001539070 / YP_001539802 / YP_001539091 / YP_001539073 / YP_001539025 / YP_001539088 / YP_001539060 / YP_001539092
Sanguibacter keddieiiT DSM 10542T / YP_003315693 / YP_003316498 / YP_003315716 / YP_003315696 / YP_003315671 / YP_003315711 / YP_003315683 / YP_003315717
Segniliparus rotundusT DSM 44985 / YP_003660155 / YP_003657599 / YP_003657860 / YP_003660158 / YP_003657662 / YP_003657468 / YP_003659776 / YP_003657859
Slackia heliotrinireducens DSM 20476T / YP_003144688 / YP_003145134 / YP_003143995 / YP_003144691 / YP_003144557 / YP_003143993 / YP_003144336 / YP_003143996
Stackebrandtia nassauensisTDSM 44728T / YP_003510005 / YP_003508941 / YP_003509984 / YP_003510002 / YP_003509727 / YP_003509987 / YP_003510018 / YP_003509983
Streptomyces avermitilis MA-4680T / NP_826120 / NP_825466 / NP_826095 / NP_826117 / NP_826135 / NP_826102 / NP_826129 / NP_826094
Streptosporangium roseumT DSM 43021T / YP_003336845 / YP_003344718 / YP_003336824 / YP_003336842 / YP_003336868 / YP_003336827 / YP_003336858 / YP_003336823
Thermobifida fusca YX / YP_290685 / YP_291151 / YP_290706 / YP_290688 / YP_290669 / YP_290703 / YP_290675 / YP_290707
Thermobispora bisporaT DSM 43833T / YP_003651199 / YP_003654142 / YP_003651178 / YP_003651196 / YP_003651220 / YP_003651181 / YP_003651211 / YP_003651177
Thermomonospora curvataT DSM 43183T / YP_003301869 / YP_003302502 / YP_003301890 / YP_003301872 / YP_003301848 / YP_003301887 / YP_003301857 / YP_003301891
Tsukamurella paurometabolaTDSM 20162T / YP_003648323 / YP_003649077 / YP_003648388 / YP_003648326 / YP_003645843 / YP_003648359 / YP_003648307 / YP_003648389
Xylanimonas cellulosilyticaT DSM 15894 / YP_003325241 / YP_003327912 / YP_003325220 / YP_003325238 / YP_003325259 / YP_003325223 / YP_003325250 / YP_003325219
Organism / Rps13 / Rps15 / Rps16 / Rps17 / Rps18 / Rps19 / Rps20
Acidimicrobium ferrooxidansT DSM 10331T / YP_003109064 / YP_003109269 / YP_003110097 / YP_003109048 / YP_003108691 / YP_003109043 / YP_003109898
Acidothermus cellulolyticusT 11BT / YP_872091 / YP_873267 / YP_873319 / YP_872075 / YP_873889 / YP_872070 / YP_872535
Actinomyces odontolyticus ATCC 17982 / EDN79893 / EDN81144 / EDN81226 / EDN79909 / EDN80320 / EDN79914 / EDN81357
Actinosynnema mirumT DSM 43827T / YP_003104230 / YP_003103481 / YP_003103580 / YP_003104249 / YP_003104679 / YP_003104254 / YP_003099005
Aeromicrobium marinum DSM 15272T / ZP_07718577 / ZP_07717964 / ZP_07717908 / ZP_07718596 / ZP_07715932 / ZP_07718601 / ZP_07716815
Amycolatopsis mediterranei U32 / YP_003762926 / YP_003768455 / YP_003764168 / YP_003762908 / YP_003771388 / YP_003762903 / YP_003768813
Arcanobacterium haemolyticumT DSM 20595T / YP_003697671 / YP_003696986 / YP_003696926 / YP_003697700 / YP_003698097 / YP_003697705 / YP_003697331
Arthrobacter arilaitensis Re117T / YP_003917514 / YP_003916220 / YP_003916700 / YP_003917533 / YP_003918558 / YP_003917538 / YP_003916879
Atopobium parvulum DSM 20469T / YP_003180155 / YP_003179809 / YP_003179708 / YP_003180171 / YP_003179051 / YP_003180176 / YP_003179822
Bacillus subtilis subsp. subtilisT 168 / NP_388022 / NP_389550 / NP_389481 / NP_388006 / NP_391969 / NP_388001 / NP_390433
Beutenbergia cavernaeTDSM 12333T / YP_002883121 / YP_002882491 / YP_002882549 / YP_002883140 / YP_002884179 / YP_002883145 / YP_002881758
Bifidobacterium adolescentis ATCC 15703T / YP_909208 / YP_909122 / YP_909072 / YP_909193 / YP_910344 / YP_909188 / YP_909608
Brachybacterium faeciumTDSM 4810T / YP_003155737 / YP_003154475 / YP_003154435 / YP_003155754 / YP_003156524 / YP_003155759 / YP_003155150
Brevibacterium mcbrellneri ATCC 49030T / ZP_06806603 / ZP_06805578 / ZP_06806229 / ZP_06804564 / ZP_06805081 / ZP_06804569 / ZP_06805044
Catenulispora acidiphilaTDSM 44928T / YP_003111734 / YP_003118541 / YP_003112274 / YP_003111713 / YP_003111129 / YP_003111708 / YP_003117742
Cellulomonas flavigenaTDSM 20109T / YP_003637714 / YP_003636614 / YP_003636567 / YP_003637736 / YP_003638765 / YP_003637741 / YP_003637313
Clavibacter michiganensis subsp. michiganensisT NCPPB 382 / YP_001223331 / YP_001222790 / YP_001222108 / YP_001223353 / YP_001223706 / YP_001223358 / YP_001222293
Conexibacter woeseiT DSM 14684T / YP_003393168 / YP_003395021 / YP_003395474 / YP_003393153 / YP_003397687 / YP_003393148 / YP_003394629
Corynebacterium diphtheriaeTNCTC 13129 / NP_938922 / NP_939816 / NP_939876 / NP_938861 / NP_939212 / NP_938856 / NP_940104
Cryptobacterium curtumT DSM 15641T / YP_003150556 / YP_003151147 / YP_003150446 / YP_003151364 / YP_003151525 / YP_003151369 / YP_003151160
Dermacoccus sp. Ellin185 / ZP_07706205 / ZP_07706287 / ZP_07705270 / ZP_07706038 / ZP_07705098 / ZP_07706068 / ZP_07705073
Dietzia cinnamea P4 / ZP_08022819 / ZP_08024801 / ZP_08024869 / ZP_08022835 / ZP_08024827 / ZP_08022840 / ZP_08023605
Escherichia coliT ATCC 8739 / YP_001723420 / YP_001723537 / YP_001724068 / YP_001723407 / YP_001726742 / YP_001723402 / YP_001726571
Frankia sp. CcI3 / YP_479720 / YP_482637 / YP_482675 / YP_479704 / YP_483595 / YP_479699 / YP_480368
Gardnerella vaginalisT ATCC 14019 / YP_003986365 / YP_003985439 / YP_003986246 / YP_003986379 / YP_003986262 / YP_003986384 / YP_003985996
Geodermatophilus obscurusT DSM 43160T / YP_003411403 / YP_003410893 / YP_003410945 / YP_003411419 / YP_003411964 / YP_003411424 / YP_003408703
Gordonia bronchialisTDSM 43247T / YP_003274751 / YP_003273305 / YP_003273228 / YP_003274823 / YP_003275750 / YP_003274828 / YP_003274283
Intrasporangium calvumT DSM 43043T / YP_004099955 / YP_004099433 / YP_004099529 / YP_004099975 / YP_004100815 / YP_004099980 / YP_004099393
Janibacter sp. HTCC2649 / EAQ00120 / EAP99591 / ZP_00997152 / EAQ00150 / ZP_00996057 / EAQ00155 / EAP99523
Jonesia denitrificansT DSM 20603T / YP_003160578 / YP_003160983 / YP_003160944 / YP_003160563 / YP_003162458 / YP_003160558 / YP_003161507
Kineococcus radiotolerans SRS30216T / YP_001360466 / YP_001361217 / YP_001361150 / YP_001360450 / YP_001364064 / YP_001360445 / YP_001363149
Kocuria rhizophila NBRC 103217 / YP_001854494 / YP_001855449 / YP_001854915 / YP_001854478 / YP_001856190 / YP_001854473 / YP_001855160
Kribbella flavidaT DSM 17836 / YP_003383905 / YP_003380816 / YP_003382578 / YP_003383924 / YP_003384786 / YP_003383929 / YP_003380254
Kytococcus sedentariusTDSM 20547T / YP_003149821 / YP_003148735 / YP_003148909 / YP_003149837 / YP_003150372 / YP_003149842 / YP_003149515
Leifsonia xyli subsp. xyli CTCB07 / YP_062830 / YP_061896 / YP_062403 / YP_062845 / YP_063228 / YP_062850 / YP_062388
Microbacterium testaceum StLB037 / YP_004223744 / YP_004223186 / YP_004226102 / YP_004223759 / YP_004224401 / YP_004223764 / YP_004226216
Micrococcus luteusT NCTC 2665T / YP_002957733 / YP_002956795 / YP_002956990 / YP_002957748 / YP_002958341 / YP_002957753 / YP_002957302
Micromonospora aurantiaca ATCC 27029T / YP_003838582 / YP_003834616 / YP_003834524 / YP_003838600 / YP_003839334 / YP_003838605 / YP_003837950
Mobiluncus mulieris ATCC 35239 / ZP_07453151 / ZP_07452830 / ZP_07452949 / ZP_07453189 / ZP_07451218 / ZP_07453194 / ZP_07451774
Mycobacterium tuberculosisT H37RvT / NP_217977 / NP_217301 / NP_217425 / NP_215224 / YP_177688 / NP_215219 / NP_216928
Nakamurella multipartitaTDSM 44233T / YP_003200565 / YP_003201586 / YP_003202458 / YP_003200528 / YP_003204620 / YP_003200523 / YP_003200936
Nocardia farcinica IFM 10152 / YP_117043 / YP_120100 / YP_120370 / YP_116951 / YP_121790 / YP_116946 / YP_117605
Nocardioides sp. JS614 / YP_925063 / YP_924367 / YP_924449 / YP_925081 / YP_925844 / YP_925086 / YP_923086
Nocardiopsis dassonvillei subsp. dassonvilleiT DSM 43111T / YP_003683036 / YP_003681491 / YP_003678180 / YP_003683019 / YP_003682731 / YP_003683014 / YP_003678640
Olsenella uliT DSM 7084T / YP_003801563 / YP_003800959 / YP_003800867 / YP_003801580 / YP_003800038 / YP_003801585 / YP_003800971
Parascardovia denticolens F0305 / ZP_06751690 / ZP_06751969 / ZP_06752638 / ZP_06751674 / ZP_06752533 / ZP_06751669 / ZP_06752132
Propionibacterium acnes KPA171202 / YP_056513 / YP_056178 / YP_056149 / YP_056536 / YP_056890 / YP_056541 / YP_055611
Renibacterium salmoninarumT ATCC 33209T / YP_001625265 / YP_001623832 / YP_001624233 / YP_001625302 / YP_001626648 / YP_001625307 / YP_001625080
Rhodococcus erythropolis NBRC 100887 / YP_002765325 / YP_002766090 / YP_002765891 / YP_002765308 / YP_002769276 / YP_002765303 / YP_002767214
Rothia dentocariosaT ATCC 17931T / YP_003983168 / YP_003984451 / YP_003985010 / YP_003983186 / YP_003983814 / YP_003983191 / YP_003984862
Rubrobacter xylanophilus DSM 9941T / YP_644887 / YP_644191 / YP_644163 / YP_644902 / YP_643629 / YP_644907 / YP_644291
Saccharomonospora viridisTDSM 43017T / YP_003132327 / YP_003133335 / YP_003132859 / YP_003132311 / YP_003135710 / YP_003132306 / YP_003133139
Saccharopolyspora erythraea NRRL 2338T / YP_001108895 / YP_001108023 / YP_001108151 / YP_001108916 / YP_001109430 / YP_001108921 / YP_001103686
SalinisporaarenicolaTCNS-205 / YP_001539061 / YP_001536230 / YP_001536093 / YP_001539078 / YP_001539800 / YP_001539083 / YP_001538628
Sanguibacter keddieiiT DSM 10542T / YP_003315684 / YP_003315088 / YP_003315123 / YP_003315701 / YP_003316496 / YP_003315706 / YP_003314105
Segniliparus rotundusT DSM 44985 / YP_003659777 / YP_003659287 / YP_003659259 / YP_003657478 / YP_003658558 / YP_003657473 / YP_003657791
Slackia heliotrinireducens DSM 20476T / YP_003144337 / YP_003143479 / YP_003143481 / YP_003144696 / YP_003145132 / YP_003144701 / YP_003143411
Stackebrandtia nassauensisTDSM 44728T / YP_003510017 / YP_003513841 / YP_003510966 / YP_003509997 / YP_003508943 / YP_003509992 / YP_003514191
Streptomyces avermitilis MA-4680T / NP_826128 / NP_823700 / NP_823820 / NP_826112 / NP_825464 / NP_826107 / NP_826737
Streptosporangium roseumT DSM 43021T / YP_003336857 / YP_003337858 / YP_003337559 / YP_003336837 / YP_003344716 / YP_003336832 / YP_003338005
Thermobifida fusca YX / YP_290676 / YP_288844 / YP_288723 / YP_290693 / YP_291149 / YP_290698 / YP_288888
Thermobispora bisporaT DSM 43833T / YP_003651210 / YP_003651682 / YP_003651595 / YP_003651191 / YP_003654140 / YP_003651186 / YP_003651760
Thermomonospora curvataT DSM 43183T / YP_003301858 / YP_003300901 / YP_003300999 / YP_003301877 / YP_003302500 / YP_003301882 / YP_003300839
Tsukamurella paurometabolaTDSM 20162T / YP_003648308 / YP_003646691 / YP_003646577 / YP_003648349 / YP_003649075 / YP_003648354 / YP_003647737
Xylanimonas cellulosilyticaT DSM 15894 / YP_003325249 / YP_003325805 / YP_003325756 / YP_003325233 / YP_003327910 / YP_003325228 / YP_003326783

Online Resource2Phylogenetic tree based on concatenated sequences of 46 RPs

NJ tree based on concatenated sequences of46 RPswas computed byPoisson model using theMega 5.1 program. The tree was bootstrapped 1,000 times, and bootstrap values over 50%are indicated at branch points.Noc, Nocardiopsis ; Cla, Clavibacter

Online Resource3 NJ tree based on the 16S rRNA gene

NJ tree based on the 16S rRNA genewas computed by Kimura 2-parameter method using theMega 5.1 program. The 16S rRNA gene copy of Thermobispora bisporawas the same usedinFig.2.The tree was bootstrapped 1,000 times, and bootstrap values over 50%are indicated at branch points.Noc, Nocardiopsis ; Cla, Clavibacter

Online Resource4 ML tree based on the 16S rRNA gene

ML tree based on the 16S rRNA gene was computed using the GTR + I + G model by PhyML program. The 16S rRNA gene copy of Thermobispora bispora was different from thatused inFig. 2.The tree was bootstrapped 100 times, and bootstrap values over 50% are indicated at branch points. Noc, Nocardiopsis ; Cla, Clavibacter