Table S3.SSH clones.

Clone / Protein classification / GenBank Accession no.1 / Description of putative protein / Accession number 2 / E-value / redundant clone number
SSH-1 / transport, translocation / FL640829 / Integral membrane protein (Phaseolus vulgaris) / AAF18411 / 3e-72 / 2
SSH-2 / protein synthesis / FL640830 / Isopropylmalate dehydratase, large subunit (Chlamydomonas reinhardtii) / NP_567405 / 3e-65 / 2
SSH-3 / defense, stress resistance / FL640831 / Heat-shock protein 90A (Arabidopsis thaliana) / P27323 / 2e-57 / 1
SSH-4 / protein synthesis / FL640832 / Ribosomal protein L3 (Lycopersicon esculentum) / AAR17783 / 1e-49 / 5
SSH-5 / protein synthesis / FL640833 / Ribosomal protein L4 (Chlamydomonas reinhardtii) / AAO53242 / 6e-44 / 1
SSH-6 / protein destination / FL640834 / ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplast precursor (Solanum lycopersicum) / S31164 / 5e-41 / 1
SSH-7 / protein destination / FL640835 / ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplast precursor (Solanum lycopersicum) / S31164 / 3e-37 / 1
SSH-8 / protein synthesis / FL640836 / Elongation factor 2 (Chlamydomonas reinhardtii) / XP_001703215 / 9e-40 / 2
SSH-9 / signal component / FL640837 / G protein beta subunit-like polypeptide (Chlamydomonas incerta) / ABA01155 / 6e-38 / 1
SSH-10 / protein synthesis / FL640838 / Elongation factor 2 (Chlorella pyrenoidosa) / BAE48222 / 1e-32 / 1
SSH-11 / signal component / FL640839 / Protein kinase (Arabidopsis thaliana) / NP_201142 / 5e-31 / 1
SSH-12 / protein synthesis / FL640840 / Elongation factor 2 (Arabidopsis thaliana) / AAK96653 / 3e-28 / 1
SSH-13 / metabolism / FL640841 / Desaturase delta 9 (Picea glauca) / AAM12238 / 7e-27 / 1
SSH-14 / signal component / FL640842 / HLA-B associated transcript 1 (Oryza sativa) / BAD88053 / 1e-24 / 2
SSH-15 / protein destination / FL640843 / Proteasome subunit (Arabidopsis thaliana) / CAA47753 / 2e-23 / 1
SSH-16 / protein destination / FL640844 / Ubiquitin-conjugating enzyme E2 I (Oryza sativa) / ABG66220 / 6e-22 / 1
SSH-17 / signal component / FL640845 / GTP-binding protein typA (Oryza sativa) / XP_464978 / 6e-22 / 1
SSH-18 / signal component / FL640846 / GTP-binding protein typA (Oryza sativa) / XP_464978 / 1e-18 / 1
SSH-19 / metabolism / FL640847 / Dihydrodipicolinate synthase (Nicotiana tabacum) / CAA56123 / 1e-18 / 1
SSH-20 / cell structure / FL640848 / Histone (Conocephalum conicum) / BAE45271 / 1e-15 / 1
SSH-21 / metabolism / FL640849 / Sterol-C-methyltransferase (Arabidopsis thaliana) / AAN31890 / 5e-15 / 1
SSH-22 / defense, stress resistance / FL640904 / LOS4; ATP-dependent helicase (Arabidopsis thaliana) / NP_190879 / 3e-13 / 1
SSH-23 / protein destination / FL640850 / Protein disulfide isomerase (Chlamydomonas reinhardtii) / AAC49896 / 3e-11 / 1
SSH-24 / defense, stress resistance / FL640851 / Carotene biosynthesis-related protein (Haematococcus pluvialis) / AAX63394 / 2e-10 / 5
SSH-25 / energy / FL640852 / NADP-malic enzyme (Mesembryanthemum crystallinum) / CAA45772 / 7e-10 / 2
SSH-26 / signal component / FL640853 / GTP-binding nuclear protein Ran-B1 (Nicotiana tabacum) / P41919 / 2e-8 / 1
SSH-27 / signal component / FL640854 / Low molecular weight phosphotyrosine protein phosphatase (Medicago truncatula) / ABE89130 / 2e-8 / 1
SSH-28 / energy / FL640855 / Dihydrolipoamide acetyltransferase (Arabidopsis thaliana) / AAM12967 / 5e-8 / 1
SSH-29 / cell structure / FL640856 / Calmodulin like myosin light chain (Bigelowiella natans) / AAT09089 / 1e-7 / 1
SSH-30 / protein destination / FL640857 / Peptidase, cysteine peptidase active site (Medicago truncatula) / ABE87439 / 3e-7 / 2
SSH-31 / defense,stress resistance / FL640858 / Methionine sulfoxide reductase (Rhodopseudomonas palustrisCGA009) / CAE29378 / 2e-6 / 1
SSH-32 / signal component / FL640859 / Nuclear GTPase (Solanum lycopersicum) / ABC26876 / 5e-6 / 1
SSH-33 / protein synthesis / FL640860 / Nascent polypeptide associated complex alpha chain (Pinus taeda) / AAF27917 / 8e-6 / 1
SSH-34 / energy / FL640861 / 6-Phosphogluconate dehydrogenase (Chlamydomonas reinhardtii) / AAL76323 / 1e-4 / 1
SSH-35 / energy / FL640862 / 6-Phosphogluconate dehydrogenase (Chlamydomonas reinhardtii) / AAL76323 / 2e-4 / 1
SSH-36 / metabolism / FL640863 / Aspartate aminotransferase 2 (Canavalia lineata) / CAA04697 / 6e-4 / 1
SSH-37 –78 / no hit / FL640864-FL640903,
FL640905-FL640906 / No homology3

1 GenBank accession numbers of SSH cDNA fragment sequences.

2 GenBank accession numbers of sequences homologous to SSH cDNA fragments.

3 No significant sequence homology found in genome, EST and protein databases.