Suppl. Table 1 Annotation of the putative genes in the 131-kb region

No / Position* / IRGSP/RAP2 Loc_ / Gene Function Analysis by IRGSP/RAP2 / MSU/TIGR Loc_ / Gene Function Analysis by MSU/TIGR
1 / 1423778..1426457 (plus) / Os06g0127000 / Peroxisomal biogenesis factor 11 family protein. / Os06g03660 / peroxisomal membrane protein PEX11-1, putative, expressed.
2 / 1433771..1434534 (plus) / Os06g0127100 / Similar to CBF-like protein. / Os06g03670 / dehydration-responsive element-binding protein 1A, putative, expressed.
3 / 1437382..1444165 (minus) / Os06g0127200 / Nuclear protein SET domain containing protein. / Os06g03676 / nuclear protein SET, putative, expressed.
4 / 1444599..1447682 (minus) / Os06g0127300 / Similar to Calcium-dependent protein kinase. / Os06g03682 / calcium-dependent protein kinase, isoform AK1, putative, expressed.
5 / 1454533..1457242 (plus) / Os06g0127500 / Similar to MEG5. / Os06g03690 / nucleic acid binding protein, putative, expressed.
6 / 1458510..1464205 (minus) / Os06g0127600 / Similar to Glutathione transporter.
7 / 1458769..1463335 (plus) / Os06g0127700 / Similar to Oligopeptide transporter 7 (AtOPT7). / Os06g03700 / oligopeptide transporter 9, putative, expressed.
8 / 1464501..1467584 (minus) / Os06g0127800 / GRAS transcription factor domain containing protein. Annoation in Genbank : putative gibberellin response modulator . / Os06g03710 / DELLA protein SLR1, putative, expressed.
9 / 1469866..1471141 (plus) / Os06g0127900 / Similar to Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase) (R2 subunit). / Os06g03720 / ribonucleoside-diphosphate reductase small chain, putative, expressed.
10 / 1478126..1484781 (plus) / Os06g0128100 / Protein of unknown function DUF248, methyltransferase putative family protein. / Os06g03750 / methyltransferase, putative, expressed.
11 / 1484906..1489635 (minus) / Os06g0128200 / LMBR1-like conserved region domain containing protein. / Os06g03760 / LMBR1-like conserved region family protein, expressed.
12 / 1491907..1501584 (minus) / Os06g0128300 / Similar to Mitochondrial half-ABC transporter. / Os06g03770 / ATP-binding cassette sub-family B member 7, mitochondrial, putative, expressed.
13 / 1503212..1508612 (plus) / Os06g0128400 / WD40-like domain containing protein. / Os06g03780 / nucleolar protein 10, putative, expressed.
14 / 1511827..1515435 (plus) / Os06g0128500 / Ribosomal protein L47, mitochondrial family protein. / Os06g03790 / 39S ribosomal protein L47, mitochondrial precursor, putative, expressed.
15 / 1519761..1525043 (plus) / Os06g0128700 / Zinc finger, RING-type domain containing protein. / Os06g03800 / ankyrin repeat domain-containing protein 28, putative, expressed.
16 / 1525539..1526624 (minus) / Os06g0128800 / Conserved hypothetical protein. / Os06g03810 / expressed protein.
17 / 1529190..1532444 (plus) / Os06g0129000 / Conserved hypothetical protein. / Os06g03820 / expressed protein.
18 / 1538029..1541211 (plus) / Os06g0129100 / Similar to Short-chain dehydrogenase Tic32. / Os06g03830 / retinol dehydrogenase 14, putative, expressed.
19 / 1543045..1545195 (minus) / Os06g0129200 / Conserved hypothetical protein. / Os06g03840 / expressed protein.
20 / 1546060..1549638 (minus) / Os06g0129300 / Armadillo-like helical domain containing protein. / Os06g03850 / impaired sucrose induction 1-like protein, putative, expressed.

*The gene location was calculated based on the RAP-DB (http://rapdb.dna.affrc.go.jp/viewer/gbrowse/build4/