LOCUS pMA1804 5646 bp DNA circular 20-OCT-2005
DEFINITION 1254+hTFAMdMTS seq 4-10-05.
SOURCE
ORGANISM
COMMENT This file is created by Vector NTI
COMMENT VNTDATE|363971411|
COMMENT VNTDBDATE|388856505|
COMMENT LSOWNER|
COMMENT VNTNAME|pMA1804|
COMMENT VNTAUTHORNAME|Mikhail Alexeyev|
FEATURES Location/Qualifiers
rep_origin 3336..3636
/vntifkey="33"
/label=ori
CDS complement(4086..4902)
/vntifkey="4"
/label=amp
misc_feature 5187..453
/vntifkey="21"
/label=Ad
misc_feature 2878..2911
/vntifkey="21"
/label=Frt
CDS 5556..1
/vntifkey="4"
/label=ITR
CDS complement(2..102)
/vntifkey="4"
/label=ITR
promoter 460..1114
/vntifkey="29"
/label=CMV
promoter 1115..1133
/vntifkey="30"
/label=T7\prom
polyA_signal 2598..2829
/vntifkey="25"
/label=BGH\pA
polyA_signal 2622..2762
/vntifkey="25"
/label=BGHpA\BLAST\corrected
CDS 1823..2542
/vntifkey="4"
/label=EGFP
CDS 1205..1816
/gene="TFAM"
/codon_start=1
/product="transcription factor A, mitochondrial"
/protein_id="NP_003192.1"
/db_xref="GI:4507401"
/db_xref="GeneID:7019"
/db_xref="LocusID:7019"
/db_xref="MIM:600438"
/vntifkey="4"
/label=TFAM
/note="Transcription factor 6-like 2 (mitochondrial transcription factor); go_component: mitochondrion [goid 0005739] [evidence TAS] [pmid 8333869]; go_function: transcription factor activity [goid 0003700] [evidence TAS] [pmid 8333869]; go_process: DNA-dependent DNA replication [goid 0006261] [evidence TAS] [pmid 8333869]; go_process: transcription from mitochondrial promoter [goid 0006390] [evidence TAS] [pmid 8333869]; go_process: regulation of transcription from Pol I promoter [goid 0006356] [evidence TAS] [pmid 8333869]"
transit_peptide 1205..1207
/gene="TCF6L1"
/vntifkey="95"
/label=TCF6L1
mat_peptide 1208..1816
/gene="TCF6L1"
/product="transcription factor A, mitochondrial"
/vntifkey="84"
/label=TCF6L1
/note="putative"
CDS 1205..1207
/vntifkey="4"
/label=MTS\hTFAM
CDS 1226..1432
/vntifkey="4"
/label=HMG1
CDS 1541..1735
/vntifkey="4"
/label=HMG2
BASE COUNT 1522 a 1420 c 1382 g 1322 t
ORIGIN
1 ttcatcaata atatacctta ttttggattg aagccaatat gataatgagg gggtggagtt
61 tgtgacgtgg cgcggggcgt gggaacgggg cgggtgacgt agtagtgtgg cggaagtgtg
121 atgttgcaag tgtggcggaa cacatgtaag cgacggatgt ggcaaaagtg acgtttttgg
181 tgtgcgccgg tgtacacagg aagtgacaat tttcgcgcgg ttttaggcgg atgttgtagt
241 aaatttgggc gtaaccgagt aagatttggc cattttcgcg ggaaaactga ataagaggaa
301 gtgaaatctg aataattttg tgttactcat agcgcgtaat atttgtctag ggccgcgggg
361 actttgaccg tttacgtgga gactcgccca ggtgtttttc tcaggtgttt tccgcgttcc
421 gggtcaaagt tggcgtttta ttattatagt cagctctagc gatgtacggg ccagatatac
481 gcgttgacat tgattattga ctagttatta atagtaatca attacggggt cattagttca
541 tagcccatat atggagttcc gcgttacata acttacggta aatggcccgc ctggctgacc
601 gcccaacgac ccccgcccat tgacgtcaat aatgacgtat gttcccatag taacgccaat
661 agggactttc cattgacgtc aatgggtgga ctatttacgg taaactgccc acttggcagt
721 acatcaagtg tatcatatgc caagtacgcc ccctattgac gtcaatgacg gtaaatggcc
781 cgcctggcat tatgcccagt acatgacctt atgggacttt cctacttggc agtacatcta
841 cgtattagtc atcgctatta ccatggtgat gcggttttgg cagtacatca atgggcgtgg
901 atagcggttt gactcacggg gatttccaag tctccacccc attgacgtca atgggagttt
961 gttttggcac caaaatcaac gggactttcc aaaatgtcgt aacaactccg ccccattgac
1021 gcaaatgggc ggtaggcgtg tacggtggga ggtctatata agcagagctc tctggctaac
1081 tagagaaccc actgcttact ggcttatcga aattaatacg actcactata gggagaccca
1141 agcttggtac cgagctcgga tcgatccact agtaacggcc gccagtgtgc tggaattcgc
1201 caccatgtct gtcttggcaa gttgtccaaa gaaacctgta agttcttacc ttcgattttc
1261 taaagaacaa ctacccatat ttaaagctca gaacccagat gcaaaaacta cagaactaat
1321 tagaagaatt gcccagcgtt ggagggaact tcctgattca aagaaaaaaa tatatcaaga
1381 tgcttatagg gcggagtggc aggtatataa agaagagata agcagattta aagaacagct
1441 aactccaagt cagattatgt ctttggaaaa agaaatcatg gacaaacatt taaaaaggaa
1501 agctatgaca aaaaaaaaag agttaacact gcttggaaaa ccaaaaagac ctcgttcagc
1561 ttataacgtt tatgtagctg aaagattcca agaagctaag ggtgattcac cgcaggaaaa
1621 gctgaagact gtaaaggaaa actggaaaaa tctgtctgac tctgaaaagg aattatatat
1681 tcagcatgct aaagaggacg aaactcgtta tcataatgaa atgaagtctt gggaagaaca
1741 aatgattgaa gttggacgaa aggatcttct acgtcgcaca ataaagaaac aacgaaaata
1801 tggtgctgag gagtgtagat ccatggtgag caagggcgag gagctgttca ccggggtggt
1861 gcccatcctg gtcgagctgg acggcgacgt aaacggccac aagttcagcg tgtccggcga
1921 gggcgagggc gatgccacct acggcaagct gaccctgaag ttcatctgca ccaccggcaa
1981 gctgcccgtg ccctggccca ccctcgtgac caccctgacc tacggcgtgc agtgcttcag
2041 ccgctacccc gaccacatga agcagcacga cttcttcaag tccgccatgc ccgaaggcta
2101 cgtccaggag cgcaccatct tcttcaagga cgacggcaac tacaagaccc gcgccgaggt
2161 gaagttcgag ggcgacaccc tggtgaaccg catcgagctg aagggcatcg acttcaagga
2221 ggacggcaac atcctggggc acaagctgga gtacaactac aacagccaca acgtctatat
2281 catggccgac aagcagaaga acggcatcaa ggtgaacttc aagatccgcc acaacatcga
2341 ggacggcagc gtgcagctcg ccgaccacta ccagcagaac acccccatcg gcgacggccc
2401 cgtgctgctg cccgacaacc actacctgag cacccagtcc gccctgagca aagaccccaa
2461 cgagaagcgc gatcacatgg tcctgctgga gttcgtgacc gccgccggga tcactctcgg
2521 catggacgag ctgtacaagt aaagcggccg ctcgagcatg catctagagg gccctattct
2581 atagtgtcac ctaaatgcta gagctcgctg atcagcctcg actgtgcctt ctagttgcca
2641 gccatctgtt gtttgcccct cccccgtgcc ttccttgacc ctggaaggtg ccactcccac
2701 tgtcctttcc taataaaatg aggaaattgc atcgcattgt ctgagtaggt gtcattctat
2761 tctggggggt ggggtggggc aggacagcaa gggggaggat tgggaagaca atagcaggca
2821 tgctggggat gcggtgggct ctatggcttc tgaggcggaa agaaccagga tcgatccgaa
2881 gttcctattc ttactagagt ataggaactt cgactatcgt cgccgcactt atgactgtct
2941 tctttatcat gcaactcgta ggacaggtgc cggcagcgct ctgggtcatt ttcggcgagg
3001 accgctttcg ctggagcgcg acgatgatcg gcctgtcgct tgcggtattc ggaatcttgc
3061 acgccctcgc tcaagccttc gtcactggtc ccgccaccaa acgtttcggc gagaagcagg
3121 ccattatcgc cggcatggcg gccctgcatt aatgaatcgg ccaacgcgcg gggagaggcg
3181 gtttgcgtat tgggcgctct tccgcttcct cgctcactga ctcgctgcgc tcggtcgttc
3241 ggctgcggcg agcggtatca gctcactcaa aggcggtaat acggttatcc acagaatcag
3301 gggataacgc aggaaagaac atgtgagcaa aaggccagca aaaggccagg aaccgtaaaa
3361 aggccgcgtt gctggcgttt ttccataggc tccgcccccc tgacgagcat cacaaaaatc
3421 gacgctcaag tcagaggtgg cgaaacccga caggactata aagataccag gcgtttcccc
3481 ctggaagctc cctcgtgcgc tctcctgttc cgaccctgcc gcttaccgga tacctgtccg
3541 cctttctccc ttcgggaagc gtggcgcttt ctcaatgctc acgctgtagg tatctcagtt
3601 cggtgtaggt cgttcgctcc aagctgggct gtgtgcacga accccccgtt cagcccgacc
3661 gctgcgcctt atccggtaac tatcgtcttg agtccaaccc ggtaagacac gacttatcgc
3721 cactggcagc agccactggt aacaggatta gcagagcgag gtatgtaggc ggtgctacag
3781 agttcttgaa gtggtggcct aactacggct acactagaag gacagtattt ggtatctgcg
3841 ctctgctgaa gccagttacc ttcggaaaaa gagttggtag ctcttgatcc ggcaaacaaa
3901 ccaccgctgg tagcggtggt ttttttgttt gcaagcagca gattacgcgc agaaaaaaag
3961 gatctcaaga agatcctttg atcttttcta cggggtctga cgctcagtgg aacgaaaact
4021 cacgttaagg gattttggtc atgagattat caaaaaggat cttcacctag atccttttaa
4081 attaaaaatg aagttttaaa tcaatctaaa gtatatatga gtaaacttgg tctgacagtt
4141 accaatgctt aatcagtgag gcacctatct cagcgatctg tctatttcgt tcatccatag
4201 ttgcctgact ccccgtcgtg tagataacta cgatacggga gggcttacca tctggcccca
4261 gtgctgcaat gataccgcga gacccacgct caccggctcc agatttatca gcaataaacc
4321 agccagccgg aagggccgag cgcagaagtg gtcctgcaac tttatccgcc tccatccagt
4381 ctattaattg ttgccgggaa gctagagtaa gtagttcgcc agttaatagt ttgcgcaacg
4441 ttgttgccat tgctacaggc atcgtggtgt cacgctcgtc gtttggtatg gcttcattca
4501 gctccggttc ccaacgatca aggcgagtta catgatcccc catgttgtgc aaaaaagcgg
4561 ttagctcctt cggtcctccg atcgttgtca gaagtaagtt ggccgcagtg ttatcactca
4621 tggttatggc agcactgcat aattctctta ctgtcatgcc atccgtaaga tgcttttctg
4681 tgactggtga gtactcaacc aagtcattct gagaatagtg tatgcggcga ccgagttgct
4741 cttgcccggc gtcaacacgg gataataccg cgccacatag cagaacttta aaagtgctca
4801 tcattggaaa acgttcttcg gggcgaaaac tctcaaggat cttaccgctg ttgagatcca
4861 gttcgatgta acccactcgt gcacccaact gatcttcagc atcttttact ttcaccagcg
4921 tttctgggtg agcaaaaaca ggaaggcaaa atgccgcaaa aaagggaata agggcgacac
4981 ggaaatgttg aatactcata ctcttccttt ttcaatatta ttgaagcatt tatcagggtt
5041 attgtctcat gagcggatac atatttgaat gtatttagaa aaataaacaa ataggggttc
5101 cgcgcacatt tccccgaaaa gtgccacctg acgtctaaga aaccattatt atcatgacat
5161 taacctataa aaataggcgt atcactctag gcaaaatagc accctcccgc tccagaacaa
5221 catacagcgc ttcacagcgg cagcctaaca gtcagcctta ccagtaaaaa agaaaaccta
5281 ttaaaaaaac accactcgac acggcaccag ctcaatcagt cacagtgtaa aaaagggcca
5341 agtgcagagc gagtatatat aggactaaaa aatgacgtaa cggttaaagt ccacaaaaaa
5401 cacccagaaa accgcacgcg aacctacgcc cagaaacgaa agccaaaaaa cccacaactt
5461 cctcaaatcg tcacttccgt tttcccacgt tacgtaactt cccattttaa gaaaactaca
5521 attcccaaca catacaagtt actccgccct aaaacctacg tcacccgccc cgttcccacg
5581 ccccgcgcca cgtcacaaac tccaccccct cattatcata ttggcttcaa tccaaaataa
5641 ggtata
//