Supplementary material
List of the 166 genes containing the desired TATA-box variants i.e. C or G at the 3rd or 4th positions (shown in bold letters). In the genome of Arabidopsis thaliana, only 44 of these (marked by *) contain the desired TATA variants without any other potential TATA-box.
*At1g04960 GATATGTATATAAGCTCAAGTGGTGTTAAATATTCTAATATGTGTCTAAG
At1g05060 GATATAATAATATGTATAAATAAGAAGCAACGAGACTAATCAACCGAAAC
At1g05560 ATATTTATATATATGTATATATATACATATGAAAGCACAGATATATCCAC
*At1g08550 ATTTGTTATCTGGGATAAAAGAGAGTAATGTGCTAATTATGTATACTCAG
*At1g08880 ACAATCAATCTTAGTAGCCTATACATATAGAGAAGAGCAAAACCCTAAAG
At1g09380 CTCTATATATATGTATGTATATAAATAAATATATGTATGTGCATGTATAT
*At1g10310 AAATGAAATAAAAAAGTCTGTATGTATACATATTCTTCGCGGCACATTTT
*At1g14210 CCCTTTTTACATATAGATTGGGAAATAAATTCAAGGAAACAAAAAATAAT
*At1g14950 TACATATATATCTGGTTTCTTGTAATGTTGTGACGAGTTTGTGTATATAA
At1g15360 AATTTAACCTATGTATATAAATATACAACATTACCATTTACCAAACATCC
At1g17060 ACATACAGCGATTTATTACATATATATCCCCTCTCTCTCTCTCTCTATAG
*At1g17520 ATTAATCTCATTACATATAAAAGAAAAAGAAAAAGATTTTGTTTGGATTT
*At1g18280 ATAACCACCTTGTGTACATATATAAACCACACGCATGTTTTACAACTTTC
At1g22690 AAATGTATCTATATAAAGAATCATCCACAAGTACTATTTTCACACACTAC
At1g22760 GGCTTAGCTAGTTATGTATAAATATGCATCCACACTCATCACACTAATTC
At1g25330 TTAGACATTTCTATCTATATAAACAATCACAACTCAATTGCAAGTTTTAT
At1g26360 AGTATCTATAAACATTCTCTTTTGTTGTTTTGTTGAGAAACTAACACATA
*At1g26830 CTTCTCCACCTTCGAAATCTATCTTCTCCGATACCTCTCTATCTATATCT
*At1g30090 TATTAAAATGAATAAATAGATATACTCTGGTTTACGTCTTCTCGATTACC
At1g30135 TCTCTCCTCACAAATAGATATAAAGATCAACATAATCTCAATCCATATAC
At1g31335 CCACAAACTCATACATATAAATACATGTGAAGTAGAATCAAAGCAAGAAC
At1g47530 TAGTGTGTCTCCATCTTCTGTATTTATATACATATATCATAAGTCAGAAC
*At1g50410 TTCCTCGTTTTTTAAAAAACCGATGAGAGCGTATCTATATTTCTTTTTTC
At1g51390 GTAGATATATACACGGCCACGGCGTCTCCGTATACAGAGGAAGTTTCTCT
At1g53890 TACTAGCTAGTAGAGGCTATAAATACGAAGAAGATATCTATATATATACT
At1g61360 CCCATGAATTTTTATGTATATACATGAAACTTGAGGAAGATTGTTCTCTC
At1g61590 CGTCCCTATCTCATATGTATAAATAAGACCCAACCCATCCATCATTGTTT
At1g63840 AAATTTGAAAGTAACGAGTTTATTATATAGTAAAATACATATAAGAAATT
At1g68780 AATTTGCTTCTACTCTATGTATAAAACCAGCTTTGAGCATGTTAAACATT
At1g73410 ATATAGACTATGTATATATATACGTGCAGGTGCTCTTCAGCTTTCTTCTT
At1g74210 AAGAGTGATATATCATATATGTATATCATTAGAAACACTTTATTATAAAT
At1g79420 ACATCTCTATACATATATATAAATACGCCAATAATCGCTATCCATTACAA
*At1g80080 TGTTTCTTCAGAATTATACATATACACACTGACAATTTCGAACCTAAACC
*At1g80160 GTACATATAAGCCATTCTTATCAAAATGACCACCTTCCTCCTGAATTCTC
At1g80830 AAAAATAACTTATCGAAAAAGTCGCATCCATTATATGTATATATATCGTT
*At2g01980 GTATGTATAGCTCTATAAGTATTTACTCTCTTTCAGCTATTTATTTTTTC
At2g05850 ACACCAAAAATATATCTATAAAATGCTGCCATTCATTTCTTAAACCTTTC
At2g05910 ATCTATCTATATATACAAGACTAATACAAGAGTTTAGTTTGTTAGTTGCA
*At2g06990 GAAAGTGAGCCCAATAGATATAAACCCTAAGAACTCAGTAATTAAAGCCC
At2g14620 AATACAATATGTATATATACTAATCAATGATCGTTATATATATTCTTTGT
At2g18360 CGTCAAACAAGATATGTATATAAAATGTGTAAAACAATAAATGCTTGGTT
*At2g21045 TAATTGTAAGTTGTATGTATACATATTCTCTCCTCAACCTTTCTCATTGC
*At2g21320 GATAGAGCGAGTATACATATACAAGCTACTCGCAGCGTCTGCAAATTCAT
At2g21990 CCTATACAAACGACTACAACTTTATGTATATATATTTCTCTATTTTTGGA
*At2g22450 CCGCTCGTGCTTACCCATAAATGGAAAAATATCTATACAACTGCCACGTC
*At2g24520 GATACATATATGTATAGTACGTAACTAGTAACTACTTTGATCTAATCAGT
At2g24580 ATTTGTCAAACACTATCTATATATGTTTTGATAATTTCATAGTCGCTTTT
At2g28510 CACTTTATCTATATTTGCTTTATATATTAAGAACCGTGCTCTTCTCCTCT
At2g28670 TCATTTCATGTATGTATATATACTCTTTGAGAATTTGATTCTATCATCAC
At2g32190 TCCTTTTTGCTTCCCTTACCTATATATACATATATCTCTATCTTCACTTC
*At2g32440 CTTTTATAGAGATATTTCTCACCATTTTTTATCTATATGCAGGGTATGAT
At2g32980 AATTTTACATATACAAAAGTAAAGTATAAATTACTGAAGTAGGAAAAAAA
At2g33835 GGAAAGGCCCATTAGATATAAAATAGTTCGGTGGTCTTTGTAACAATGGT
At2g35670 TATCTATAGTTTTTTTCATTATTAATTAGTTTTTTCTTTGTTTATTCAGC
*At2g38730 TATTTCAACAATACATATATTAAGGCGTAGGAAAAACTAATAAGAGAGGA
*At2g40300 ACATCACAATCTCACTTTTACATATATCTCCCTCGCCTCACGAAAAATCC
At2g41640 ATAGTTGTATGTATATATGCGTATGCATCAAAAAGTCTCTTTATATCCTC
At2g41810 AGGAACTTGTGCATATATCACAACCCTCTTATCTTATGTATACTCTTTTA
At2g42860 CGACATTGCAACTAATATATGAAGCAATCTTCTAGATATATTGAGTCCAT
At2g42990 TTATGTATATAACTGAATGAAATTCCTAGGTACCATCGCCGCATGCTAAA
*At2g43255 TCATTTTGCTTGAAGATTCAGTTGACGTATCTATAGCGATGGAATATCTC
At2g43390 ATATATACATATATATGTAAGAGAGGCTATACACACTACATCACTCTTCT
At2g43820 CAAAACCTATATCTACATATATTCTCATCAACATCTCTTGAGACATATTC
At2g46750 CTTAACGCCACACAATATCTATATATACCAAATATATTTACAAAGCCGAC
At2g46970 CCTCCATATCAATCAATCATAAATGAAATAAGCGAATATACATATATACA
At2g47140 TACATATACCCCCATGTATAAATATCCACACATAGCTCTCTCGTAGCTCT
At2g48140 TGCACCCATTTTATCATATATAAAACTGAATAATTGTATATCTATAAAGC
*At3g02120 GTTCTTAGCCAATCACATACATATAAATCAAACTTACACCCAAATCCGTC
*At3g02380 TTTCCCCTCTCACCACCTAGATATAGTCTCATTAGCCTTCCCTCCTTTCT
At3g02600 TGGTAGATATAGCGAAACATTTATATTGCCCACTCCCACTTGTTTGTGTT
At3g03270 ACCGGTTATTATATACATATAAATTAGACTACCGTAATCAATTTCTACTT
At3g03760 TCCACATTCACACATGTACATATACACTTCATATAAATTAACATACACAT
At3g04720 CTATAATTTTATTATTTTCATATATATATAGATATATAGATAGATGCATT
At3g05650 AGTCTATTATTATGTATAAAGAGATGAGCATGAAACCCAATATTACCATC
At3g05930 CTTCTTTACGTAGATATATAAATTGAGAAACAATGTTAAAGTATTTTCTC
At3g06180 GTATAGATACATATAAAGACATAATAAGTATATGTAAAGGAGGCATCACC
At3g06390 CTCATCACCGGGACTATCTATATATATATACTCACAAATAATCTCATGTA
At3g13445 GGGTAGCATGGGTATGTATATATAGGTATAAAGGGGCTTAAGGATCCCAA
At3g14360 ATATGCATGCATATCTATAGTATAAGCTAGTCTCCATTGAATACAAAACC
At3g16670 GAGATATCTATAAAACTTGTTCTATAAATAGAGCTGCATAAGACAGTACT
At3g16920 CTCTATACATATATGTTTGTATATAAAGTTATACATACAATGGTCACATT
At3g18140 AACCCCAATAGATATATATTTATACTAAAACCTCCCCGCGTTAATTAATT
At3g20510 ATATAAAGTTGAGATACATATAAAATTACAAATTAATTACAATTAGGCCA
At3g21370 TATGCATGTATATATCTATAAATATATAACGATATTTCTCCTTTCAAATC
At3g22210 GAATTCAGATGCTATCTATATAAAGAGATATTATTATCCTCAAGAGCCTT
At3g25770 CCAACATGTCTATCTATAAATAGACGGAGATATTTCGTAGAACTCAAATC
At3g26520 ATTTGTTTATGTGACAAAGAAATGGATTTTATCTATAACTATCAAGAAGA
At3g28007 CAAACATCTCATCTTCTATCTATAAATATATGCAAAAACCATACAAGTTT
At3g28455 TGGACACCTACGTATGTATATTGTTGCTTTGTGTTGCTTCATCTTTAAAT
At3g28730 AAACCGCCTGAGTGTCTATGTATAAAAGTTGATATCATAGTTTGGAAAAA
At3g28910 ATACTTTTATTTATTATCTATACAATTTGAGAGACCCAAGAGTCCAAGAC
At3g30340 AAAGACAAGTAAATACATATATAAATATACACTCACACACACACACATAT
At3g45290 TATTAATAGATATATAGTTATATTTTCCACCACATATCTAATTCTTCATC
At3g46810 ATATATGGATATATCTATAAACTATTTTACTTAGATCATCAATGTAAATT
*At3g47540 ACCCAACCATTATCCCTATATGTATAACACACAGCCTCTTCTTTTTCACC
At3g48550 CACGAAGCAGCTTACATATAAAGTGATTGGTAATTGCCATCCCCACACTT
At3g50400 CAGCAGAGTTATCTATATAAACTCTTCTTTGTCATAGAACAATAAAAACC
At3g50560 AAGAAAGGTGTGTATATATGTATATATAACAACCAAAAATTTATCTAGTC
At3g51050 TATTAAACGTCTGATATATCTATACGGCGTAGTTTTGAAGTTGTCGACTA
*At3g51330 AATTCTTCAATTTCCTTACATATACGTTATTCTTCGAGGATTATGTCTTT
*At3g52790 TCCATACACGCATCTAATACATATATTTCAATCCACAAAACCCTTTTCCT
*At3g52840 GCCTTTACATCTATGTACATATAGCTTCTAGATTCTCATTCATTCCAATC
At3g60420 CATTGCTTGCATATATGTATAAATACCTCCCACTTCTAGTAACAAAGATC
At4g00400 TAGATATAACCCACTGAATTAATATTACGGTCTTCAATATAGGTGCATTT
*At4g00950 AAACACTTGTAGTGTAGATATAAAAGACACACCTCAGAGAAGAGAAGAGC
At4g01650 TATACATATAAACCAAATTGTATTTAGTCTTGAGATCTTCAAAAACATCT
*At4g09460 AGTCACATGTACATATACCAAACTTAGTCAAAGTCTCCTCCTTTTTATAT
At4g09610 TAGCCACTATAAATATACCAAAGAGGTTGGATTATACATATAGCCGTAAT
At4g12530 AAACCTTATCAAACACTATAAATACAATAAATCTCCCATCATATCTATAT
*At4g12890 ACAGCGGTCAAAAAGTATCTATAAATGTTTACACAACAGTAGTCATAAGC
*At4g12960 CTAACGGTAAAAAAAGTATCTATAAATGTTTACACAAGGTAGTAGTCATT
At4g14050 AATACATATATAGAAAAAGTGTAAACTAATTTAGATATTAGCGTTACCAT
At4g15290 TCACTCAATACTATTGTGTATATATATCTATACTTTGTCAGCCCACTAGT
At4g15440 GTTCTCTTTATTTATTTATTTATACCTTACCAAGATATATCTATAACCGC
At4g15735 TGCAAAATATCTATATATAATCAATTTTACAACTGAAACTATAACATACA
At4g16146 TGGCCGTATGATGTATATAAATACATATACAAGTTTTGCTAAACGCATAC
*At4g19410 AAAGTTTGATTTTTTATTTGCAACTTGTGGATATGTATCTATATGATGAA
At4g19430 TATGTATAGATGTGTGAATATAAATATGTTAAGTAAGGAGTGAAAGAGCA
*At4g20350 AGATACTAGTGTATGTATATATGTATCTTTTCTCTTTGTTTCAGTGCCTC
At4g21340 CTTAAACCTCATCGCTACATATAAATACAATCCCCATCATCAACATCATT
At4g24015 TATCTATATATATACCTTCTCTTGTGCCTCCTTAGCTCCCATCAAAACCC
*At4g24640 CCTAGATGAAACCCTAAGCATACATATATATCCGCCTTGAACCAAAAGCC
At4g26010 TCTTATCCCCAAAACTACATATAAATATGCATTTACGGGGGCTTAGAATT
At4g26080 ATAAAATAAAGTGATATGTATATAAGTATACATACATAAATAGTAGATTC
*At4g27670 AGAGCCTTCTCATCCTCACCTACATATATACACTCACTTCTACAATTGTA
At4g29930 CTCTGTCAGACTCTTTATGTATAAAATCCTCGGCCCACTCTTGTTTTGAT
At4g32980 AGAGACACATACATATATATATATATAGAGACATGTAAATAGTAAAATGT
At4g34131 GTGTGGATTTTATGTGCTATATATAGATATGTATAAAAGTATAAGCTCTT
*At4g35830 CCACCACGGATCTGTCAGATTTATTTCCTTCTTACATATAAAAAAAATCT
At4g37530 CACTCCATTTATGTAATTATACATATAAAGAGAAATTGTTTTTTTTTTTT
At4g37850 TCTCTATATATACATGTACATATATGCATGTGCATTCCACTGTTTTCACA
At4g38840 AAGTAATGTTCTTATCTATATATACTCATCACTGACTCCTTTCTGCTCTG
*At4g39130 ATGATTAATGTTTAGTACATATAATGTTCACGCAAACGCATAGTGTTAGG
*At4g39210 GTGACTGTCATTGTCAGATATCTATAGCTTTGTTGGTAAAATTTCACATG
At5g06070 CTATCTATATGCGTCTCTCTTTATATAAGTCTACGTGCGTCTAAATCTAC
At5g06860 AAGTCTATATCACTCACTATATAGTATGTATATGTATCACTAACACTTTC
At5g06870 CATGCATTCATAGCCTATATGTATATCAATCATAGTTTCCATAAAAACTC
At5g08580 GAGTCAAAATCTTCTATAGATATATATTCGCAAGACTCCATCTTTCCAAC
At5g09760 ACACACACACCTATACATATATATACACACACATTCGTCTCTAATGGCTT
At5g13200 CGTTTTATATATGTATAATCCAATCTTATAAATTAAAAAACCAAGTTCAA
*At5g13330 TGTTTGTGTGTTACATATACGTGTGAGTACATACTTTGTTGTAAAAGTGG
At5g14000 GTGTAGCCGTGGGGATTTATATATACATATAACATATATTGACAACCTCT
At5g14480 GGGAATAGATATAAACCAAAAAGCATCAAACGGCTATAATTGGCGTTACA
At5g21160 ATATAAAATAAACATATACATATAAAAAAAGAGGAAAGTAACTAGGGTTT
At5g22270 TGTATCTTCTCCTCTATCTATATATATATAACAGCCACTAACATGCAGAC
At5g24313 GTGACTTTGTGAGCTATGTATATACATAAGACATTACAAGATGGAACCTC
At5g24314 GAACCGGAGAAGCTTACATATAAAATAGGATCCGGTTCTATCTATTCACT
At5g25410 ATCATAATCTATATGTATATAAATAACATAGTGTTTTCAGTCTTGAGGAA
*At5g27100 ATGCCACACCAAAGAGCATACATATAGACCACCAAGTTTCATTCTTTTTC
At5g37740 CCGTATCTATATAAGAAAATAGACAAAAGTCACAAAACCTCATCAGAGCT
At5g39210 TATCATCTTATCTATAACAACTACAAGAAGCTTACATTGCTGCTACTAAA
At5g46050 CATCATCTACTTAATATGTATATATATGAGACAAAAGTGCCGACTCTCTT
At5g47000 AAAACAACCACACGTACATATAAGGAAATGAAAACCATCCTTTACGTAGC
At5g47500 TAGTACAAGTACATATATAAAACCTATAGATCCTCCATCGTAATTTACTT
At5g54300 TATAAATTTCACCGTATCTATATAAATCCACACATCTCAAAGCTTCTTTA
At5g54810 GAAAAAAAAAAAAATCTATCTATAAAAACATGTGTTACTTTGAAAGGATA
At5g57785 ATATTTCATCCGACTTATCTATAAAGACACATAGTCTCTCTTGTTCTTCT
At5g59080 ACATCCCTTTTAGCAATATGTATATATAGCCCCATTGAAATCTTATTGTC
At5g59105 CAAAATCACACTTTATCTATATATATATATACTTATCCTAAGTGTAAAAA
At5g60660 TTATACCAAACCTCTATCTATATATATGCACACACAAACAAACCAAAAAT
At5g61340 CATATTTTATATACATATATATAGATGACCTGCATTGAGAAAACCCTTTC
At5g61780 ATTAGGGTAAAATTACATATATAAGTATAATATCCGATTTCTCTCATGAT
At5g63800 CCCAATTATTGCAAGTCAATCGATTTGTTTATCTATATAAAGCTCCCAAA
*At5g64330 CATCACAGGCTGTTAGATATATGAGAGACTTTGGTTTTGAAAATCTCTCT
*At5g64780 GGGGCCCAGGTTTTTAGATATATGGGACCCTTAAAAGTAGCATGAAAGCC
At5g65800 TTATTATCTATATATATATATATCCCAACAGACCCATTGCTTCTCCAACC
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