Table S3. Comparison of Changes at the Protein and Transcriptional Levels in Strain E1

Table S3. Comparison of changes at the protein and transcriptional levels in strain E1 relative to strain E0*

Gene / Fold changeat the protein level(Log2 ratio) / Fold changeat the transcriptional level(Log2 ratio) / Gene / Fold change at the protein level (Log2 ratio) / Fold change at the transcriptional level(Log2 ratio)
kdsA / 7.42 / 0.17 / crr / –3.38 / 0.17
accC / 6.64 / –1.22 / lpdA / –3.51 / –0.10
pfkA / 5.38 / 0.89 / trpS / –3.57 / –0.10
nuoF / 5.08 / 2.54 / ompX / –3.64 / –1.09
gnd / 5.06 / –0.13 / pnp / –3.68 / –0.50
purH / 5.06 / –0.72 / ompT / –3.85 / –2.42
rho / 5.02 / –1.06 / serC / –3.9 / –1.16
pyrG / 4.64 / –0.54 / rpsA / –4.11 / –0.54
dapA / 4.64 / –0.07 / fiu / –4.11 / –5.07
pheS / 4.52 / –1.02 / aceE / –4.27 / –1.23
tnaA / 4.4 / 5.63 / tktA / –4.29 / –0.10
kdgK / 4.32 / 0.74 / oppA / –4.47 / 1.36
glpD / 4.32 / 2.17 / gapA / –4.64 / 0.84
sdhA / 4.32 / 2.73 / yhgF / –4.68 / –1.44
yncE / 4.32 / ND / proA / –4.72 / –0.09
lpxA / 3.39 / –0.53 / tolC / –4.92 / –0.06
ackA / 3.32 / –1.56 / talB / –4.94 / 0.21
sucD / 3.24 / 3.09 / nuoC / –5.02 / 2.42
ompW / 2.56 / 3.82 / cirA / –5.21 / –4.48
rplB / 2.19 / –0.96 / proS / –5.32 / –0.60
rplI / 2.06 / –0.53 / gcvT / –5.82 / 1.28
papA / 1.02 / –0.09 / glyA / –6.31 / –0.42
glpK / –0.07 / 3.52 / glyS / –6.31 / –0.63
pckA / –0.89 / 1.73 / mdoG / –7.00 / 0.36
bla / –2.18 / 0.36 / fusA / –7.10 / –0.57
ompA / –2.25 / –0.01

*Only genes/proteins that were identified using 2D gel electrophoresis and MALDI-TOF-MS are included.