Supplementary Table S1. Collections of Lyophyllum from this study and the GenBank accession numbers for the respective ITS, IGS and EF1-α DNA sequences

Collection / Country / Geographical origin / Tissue / Accession no.
ITS IGS EF1-α
L. shimeji
Lsh JS1a / Japan / Shitoku river (Nakagawa mura), Minami Alps, Nagano / Culture / JN983976 JN984014 JN984052
Lsh JS1b / Japan / Shitoku river (Nakagawa mura), Minami Alps, Nagano / Culture / JN983968 JN984006 JN984053
Lsh JS2a / Japan / Shitoku river (Nakagawa mura), Minami Alps, Nagano / Culture / JN983972 JN984009 JN984054
Lsh JS2b / Japan / Shitoku river (Nakagawa mura), Minami Alps, Nagano / Culture / JN983960 JN984004 ND
Lsh JS3a / Japan / Komagane, market, Minami Alps / Culture / JN983961 JN983990 JN984045
Lsh JS3b / Japan / Komagane, market, Minami Alps / Culture / JN983955 JN983989 JN984046
Lsh JS4a / Japan / Komagane, market, Minami Alps / Culture / JN983949 JN983994 JN984040
Lsh JS4b / Japan / Komagane, market, Minami Alps / Culture / JN983951 JN983993 JN984041
Lsh JS5 / Japan / Tatsuno, Nagano / Culture / JN983973 JN984012 JN984048
Lsh JS6 / Japan / Tatsuno, Nagano / JN983974 JN983992 JN984043
Lsh JS7 / Japan / Shitoku river (Nakagawa mura), Minami Alps, Nagano / Culture / JN983962 JN983991 JN984049
Lsh JS8 / Japan / Shitoku river (Nakagawa mura), Minami Alps, Nagano / Culture / JN983952 JN983987 JN984044
Lsh JS9 / Japan / Shitoku river (Nakagawa mura), Minami Alps, Nagano / Culture / JN983963 JN984005 JN984050
Lsh JS10 / Japan / Komagane, market, Minami alps / Culture / JN983967 JN984003 JN984051
Lsh 8111101 / China / Mount Xishan,Kunming, Yunnan / Culture / JN983969 JN983996 JN984057
Lsh 8111102 / China / Mount Xishan,Kunming, Yunnan / Culture / JN983971 JN983997 JN984055
Lsh AT713 / Japan / Ina, Nagano; Quercus serrata & Pinus densiflora / Culture / JN983959 JN984011 ND
Lsh AT608 / Japan / Daigo, Ibaraki; unk habitat / Culture / JN983958 JN983988 JN984032
Lsh INA1 / Japan / Ina, Nagano; unknown habitat / Culture / JN983975 JN983995 JN984039
Lsh SC1 / China / Western mounts of Kunming, Yunnan / Culture / JN983970 JN984000 JN984056
Lsh NS123 / Japan / Yamaten, Totsukawa-mura, Nara Prefecture / FB / JN983956 JN984013 JN984033
Lsh NS124 / Japan / Yamaten, Totsukawa-mura, Nara Prefecture / FB / JN983966 JN984001 JN984034
Lsh NS125 / Japan / Yamatenn, Totsukawa-mura, Nara Prefecture / FB / JN983953 JN984007 JN984035
Lsh NS126 / Japan / Yamaten, Totsukawa-mura, Nara Prefecture / FB / JN983964 JN984002 JN984047
Lsh NS127 / Japan / Yamaten, Totsukawa-mura, Nara Prefecture / FB / JN983954 JN983998 JN984036
Lsh NS128 / Japan / Yamaten, Totsukawa-mura, Nara Prefecture / FB / JN983950 JN983999 JN984042
Lsh NS129 / Japan / Yamaten, Totsukawa-mura, Nara Prefecture / FB / JN983957 JN984008 JN984037
Lsh NS130 / Japan / Yamaten, Totsukawa-mura, Nara Prefecture / FB / JN983965 JN984010 JN984038
NZ2Q88 / NZ / Christchurch;
PFR site / Ectomycorrhiza / JN983986 JN984022 ND
NZ3Q88 / NZ / Christchurch;
PFR site / Ectomycorrhiza / JN983984 JN984021 ND
NZ4Q88 / NZ / Christchurch;
PFR site / Culture / JN983985 JN984020 ND
L. fumosum
Lfum Nlf24 / Japan / Inohara, Kitaimanishi, Nosegawa-mura; Nara Prefecture / FB / JN983977 JN984015 JN984031
L. decastes
Ldec 2Q106 / Japan / To, Naka, Ibaraki under Chamaecyparis / Culture / JN983980 ND JN984025
Ldec 3Q106 / Japan / To. Naka, Ibaraki under Quercus / Culture / JN983983 ND JN984023
Ldec 4Q106 / Japan / Nakamaru, Mito, Ibaraki; unk habitat / Culture / JN983978 JN984018 JN984026
Ldec 5Q106 / Japan / Iida, Naka, Ibaraki; “Naka 3 Junior High School” yard / Culture / JN983982 ND JN984027
Ldec 6Q106 / Japan / Nukada, Naka, Ibaraki; agricultural field near forest / Culture / JN983979 JN984017 JN984028
Ldec 7Q106 / Japan / Hitachinaka, Ibaraki; under Ligustrum / Culture / JN983981 JN984019 JN984029
Ldec 8Q106 / Japan / Kasama, Ibaraki; under Ligustrum / freeze-dried mycelium (ex pure culture) / ND JN984016 ND

NZ, New Zealand; ITS, Internal Transcribed Spacer; IGS, Intergenic Spacer; EF1-α, Elongation Factor1-α gene; FB, fruiting body; ND, not determined; UNK, unknown; NA, not available