Supplementary Table 1 List of rice varieties used for validation of the marker DRR GL

S. No / Name of variety / Genotype of marker / KL Phenotype (mm) / KE Phenotype(mm)
1 / Savitri / C allele / Short (4.5) / Low (7.4)
2 / Mukti / C allele / Short (5.2) / Low (7.6)
3 / SKAU339 / C allele / Short (5.2) / Low (7.7)
4 / Deepthi / C allele / Short (5.0) / Low (7.9)
5 / SYE2001 / C allele / Short (5.1) / Low (7.9)
6 / Ponmani / C allele / Short (4.3) / Low (8.0)
7 / ADT®45 / C allele / Short (5.0) / Low (8.1)
8 / RCM5 / A allele / Long (6.0) / Low (8.2)
9 / ADT37 / C allele / Short (4.5) / Low (8.4)
10 / Gayatri / C allele / Short (4.8) / Low (8.5)
11 / Bhogali / A allele / Long (6.2) / High (11.0)
12 / IET7575 / A allele / Long (6.1) / High (11.0)
13 / BR2655 / A allele / Long (6.0) / High (11.0)
14 / Prasad / A allele / Short (5.7) / High (11.1)
15 / Aghoni / A allele / Long (6.1) / High (11.1)
16 / Panchami / C allele / Short (4.9) / High (11.1)
17 / Karishma / C allele / Short (5.0) / High (11.1)
18 / ADT41 / A allele / Long (6.5) / High (11.7)
19 / Jaya / C allele / Short (5.9) / High (11.6)
20 / Shanti / A allele / Long (6.5) / High (11.1)
21 / SKL8 / A allele / Long (6.0) / High (11.2)
22 / VLdhan206 / C allele / Short (5.3) / High (11.2)
23 / PR115 / A allele / Long (6.3) / High (11.2)
24 / Aruna / A allele / Short (5.2) / High (11.2)
25 / ADT®46 / A allele / Long (6.1) / High (11.2)
26 / Indrayani / A allele / Long (6.2) / High (11.2)
27 / Kanak / A allele / Short (5.4) / High (11.2)
28 / SKAU27 / C allele / Short (5.7) / Low (10.6)
29 / IR8 / A allele / Long (6.4) / High (11.3)
30 / Luit / A allele / Long (6.0) / High (11.3)
31 / Prathiba / C allele / Short (5.6) / High (11.3)
32 / Tulasi / C allele / Short (5.2) / High (11.3)
33 / Nidhi / A allele / Long (6.0) / High (11.3)
34 / Triguna / A allele / Long (6.5) / High (11.3)
35 / IWPonni / C allele / Short (4.8) / High (11.4)
36 / PR106 / A allele / Long (6.0) / High (11.4)
37 / Remya / A allele / Long (6.0) / High (11.5)
38 / Pavitra / C allele / Short (5.2) / High (11.5)
39 / Neeraja / C allele / Short (5.5) / High (11.6)
40 / ADT36 / C allele / Short (5.5) / High (11.6)
41 / Ravi / A allele / Long (6.0) / High (11.6)
42 / CSR13 / A allele / Long (6.0) / High (11.7)
43 / ASD18 / C allele / Short (5.4) / High (11.7)
44 / Bamaleswari / C allele / Short (5.7) / High (11.7)
45 / Mahamaya / A allele / Long (6.0) / High (11.8)
46 / Bharatidhashan / A allele / Long (6.1) / High (11.8)
47 / Prasanna / A allele / Long (6.1) / High (11.8)
48 / Vandana / C allele / Short (5.6) / High (11.8)
49 / Hemavathi / A allele / Long (6.1) / High (11.8)
50 / PR116 / A allele / Long (6.2) / High (11.9)
51 / Vikas / A allele / Long (6.4) / High (11.8)
52 / Phalguna / A allele / Long (6.9) / High (11.9)
53 / Anjali / C allele / Short (5.5) / High (11.9)
54 / Shakuntala / C allele / Short (5.8) / High (11.9)
55 / Govind / A allele / Long (6.1) / High (12.0)
56 / Chandana / A allele / Long (6.1) / High (12.1)
57 / SYE1 / C allele / Short (4.9) / High (12.1)
58 / Nagarjuna / A allele / Long (6.6) / High (12.1)
59 / Mugadsuganda / A allele / Long (6.0) / High (12.1)
60 / Pantdhan4 / A allele / Long (6.0) / High (12.2)
61 / Sumati / A allele / Long (6.4) / High (12.2)
62 / Pantdhan11 / A allele / Long (6.1) / High (12.3)
63 / Chilarai / C allele / Short (5.3) / High (12.3)
64 / Renjani / C allele / Short (5.3) / High (12.3)
65 / KRH2 / C allele / Short (5.3) / High (12.4)
66 / IR30864 / A allele / Long (6.5) / High (12.4)
67 / CSR27 / A allele / Long (6.0) / High (12.5)
68 / ADT38 / A allele / Long (6.3) / High (12.5)
69 / Pantdhan12 / A allele / Long (6.2) / High (12.5)
70 / Cottondorasannalu / A allele / Long (6.1) / High (12.5)
71 / Pantdhan10 / A allele / Long (6.8) / High (12.6)
72 / Aditya / A allele / Long (6.2) / High (12.6)
73 / VLdhan81* / C allele / Long (6.2) / High (12.7)
74 / PR114 / A allele / Long (6.7) / High (12.9)
75 / Vivekdhan82 / C allele / Short (5.9) / High (13.2)
76 / Sabitha* / C allele / Long (7.3) / High (13.6)
77 / Pantdhan15 / A allele / Long (6.7) / High (14.7)
78 / Rasi / C allele / Short (4.8) / Low (9.8)
79 / Ratna / A allele / Long (6.5) / High (12.3)
80 / Thella hamsa / A allele / Long (6.2) / Low (9.0)
81 / Mangala / C allele / Short (5.1) / High (12.5)
82 / Jyothi / A allele / Long (6.4) / High (12.4)
83 / Krishna hamsa / A allele / Long (6.2) / High (11.8)
84 / Lachit / A allele / Short (5.3) / Low (10.3)
85 / BR 2655 / A allele / Long (6.1) / High (11.0)
86 / GR 103 / C allele / Short (5.0) / Low (9.5)
87 / HKR 126 / A allele / Long (6.6) / Low (10.3)
88 / Prakash / A allele / Long (6.4) / High (11.6)
89 / Kanakom / C allele / Short (5.3) / Low (10.3)
90 / Kundalika / C allele / Short (4.7) / Low (9.5)
91 / Swarnadhan / C allele / Short (5.7) / Low (9.3)
92 / Purnendu / C allele / Short (5.1) / Low (10,0)
93 / Barh avrodhi / C allele / Short (5.4) / High (11.6)
94 / Ramba / C allele / Short (5.6) / Low (10.6)
95 / Sabita* / C allele / Long (7.3) / High (13.6)
96 / Bagherathi / C allele / Short (5.5) / Low (9.6)
97 / Jitendra / A allele / Long (7.0) / High (13.1)
98 / Jalanidhi / C allele / Short (5.1) / Low (10.4)
99 / Jalpriya / A allele / Long (6.9) / High (16.6)
100 / Dinesh / C allele / Short (5.2) / Low (10.8)
101 / Padmanth / C allele / Short (5.7) / High (12.4)
102 / CSR 13 / A allele / Long (6.0) / High (11.7)
103 / CSR 27 / A allele / Long (6.2) / High (12.3)
104 / CST 7-1 / C allele / Short (5.5) / Low (9.5)
105 / Narendra usar -2 / A allele / Long (6.5) / High (11.7)
106 / Mahi sugandha / A allele / Long (6.2) / High (11.5)
107 / Akutiphou / A allele / Long (6.5) / Low (10.3)
108 / Palamdhan 957 / A allele / Long (6.4) / High (11.3)
109 / RP 2421 / C allele / Short (5.2) / Low (10.8)
110 / VL dhan 221 / C allele / Short (5.4) / Low (10.8)
111 / Sukaradhan 1 / A allele / Short (4.9) / High (12.9)
112 / Gautam / C allele / Short (5.5) / Low (10.8)
113 / CH 988 / C allele / Short (5.5) / Low (8.7)
114 / ADT 39 / C allele / Short (5.1) / Low (10.1)
115 / Jeeriga samba / C allele / Short (4.0) / Low (8.8)
116 / Vishnubhog* / C allele / Long (6.5) / High (11.4)
117 / Laldhan* / C allele / Long (6.0) / High (11.0)
118 / Badhsah / C allele / Short (4.1) / Low (8.5)
119 / Sheethalkani / C allele / Short (3.7) / Low (6.3)
120 / Sharbathi / A allele / Long (6.1) / High (11.3)
121 / Nipponbare / C allele / Short / Low
122 / Taipei 309 / C allele / Short / Low
  • * Recombination between the genotypes and phenotype of KL and KE

Supplementary Table 2 List of basmati rice varieties used for the validation of DRR GL

S. No / Name of variety / Genotype of marker / KL
Phenotype (mm) / KE
Phenotypes (mm)
1 / Basmati370 / A allele / Long (6.4) / High (13.1)
2 / Basmati 9313 / A allele / Long (6.0) / High (13.0)
3 / Basumati 5888 / A allele / Long (6.2) / High (12.8)
4 / Panjab basmati / A allele / Long (7.4) / High (12.5)
5 / Pusa Basmati 1 / A allele / Long (7.4) / High (14.4)
6 / Type 3 / A allele / Long (6.8) / High (14.0)
7 / Pusa 1121 / A allele / Long (7.6) / High (17.7)
8 / Basumati 427 / A allele / Long (6.2) / High (13.3)
9 / Mahisugandha / A allele / Long (6.1) / High (11.5)
10 / HBC 45 / A allele / Long (6.3) / High (12.3)
11 / Mugad sugandha / A allele / Long (6.2) / High (11.7)
12 / Basmati 136 / A allele / Long (6.1) / High (12.8)
13 / Tarori basmati / A allele / Long (7.1) / High (14.7)
14 / Yamini / A allele / Long (6.9) / High (14.7)
15 / HBC 85 / A allele / Long (6.3) / High (11.7)
16 / Basmati 443 / A allele / Long (6.3) / High (15.1)
17 / Ranbir Basmati / A allele / Long (6.2) / High (19.1)
18 / Basmati 124-10 / A allele / Long (6.1) / Low (8.3)
19 / Basmati sufaid 100 / A allele / Long (6.7) / High (13.8)
20 / Basmati 217 / A allele / Long (6.1) / High (13.1)
21 / Hariyana Basmati / A allele / Long (6.7) / High (11.0)
22 / Basmati 213 / A allele / Long (6.2) / High (13.5)
23 / R-1498-778-388-1-1 / A allele / Long (6.2) / High (12.0)
24 / Kasturi / A allele / Long (7.2) / High (12.8)
25 / HBC46 / A allele / Long (6.1) / High (13.8)
26 / Super basmati / A allele / Long (7.2) / High (14.0)
27 / Basmati 242 / A allele / Long (6.2) / High (15.3)
28 / Basmati 386 / A allele / Long (7.0) / High (16.2)
29 / Basmati 122 / A allele / Long (6.3) / High (11.0)
30 / Vasumati / A allele / Long (7.5) / High (14.7)

1